LOC120570318


Basic Information

Item Value
gene id LOC120570318
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 16013565 ~ 16096337 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818606.1
CGATCGTCTTCTTCTTACCGACTATGGAGGCGCGTTTCACTCTTCCACATGCATGGGACTAAACTACGGGAGTTTAACGATCAAGTTTCATGTTCCAATGTAGATCCGTGCAGGCAGCGGAACAACAGTTCTCCCAAGGAAGAATGCCAGCTCCTGAGCAGAGCCCAGTGACGGAGGAGGGGCTTCTGCTGACCATCCGCGACAGTTCAACTCGCCGCAACATGGATGCCGACAACACCGCCAACAACATCCTGGCGTCCGTCAAAGAACAGgAGCTCCAGTTTGAGCGGCTAACCAGGGAGCTGGAAGTGGAGAGGCAGATTGTGGCCAATCAGCTGGAAAGATGCAGACTCGGGGCGGAGTCGCCAGGCGCTGGTAGCAGCAGCTCGTCTGAGAAGTCCCTGCCTTGGAGAACTGCAGatgCCTCCGCCTTGGGGGACACCAAGTCTCGGGTGACTGACAGCTCACAGTCGCCCAGCTACCGCATCAGGACTGAGTCAGAGCAGGTGTCTCTGTACTCCCCGGAGCAGTCCTCCCTCCATGAAACCTTTTTCTGTCACGCTCTTTCAGGATCCGCGGTGAATTCACGAAGCTCAACTCAGATGAACTCGTACTCAGACAGTGGCTACCAGGATGCCAGCAGCGGTTACCTCAACAGCCAGAACCTGGGCAAGGCTGAGCTGAGGATGCAGCATTCCTTCCCTGGCACCGGAACTGGTACCATGGGAAGGAATACCAGGGCCGAAGGCCAGGCTTCAGCCCAGGCTCCAGCAGTCACAGCAGCAGTGCCGGGTCGTGCTATGCGGAGGGTAAGCTCAGTGCCTTCTCGCTCTCACTCGCCAGCCTATGCCAGCAGTATGTCACCCTCCCGCGGCTCCCTGCGTACCTCAGGTGGCAGTGCCTACGGCTCCCCCATTGTAACTGAACCCAAACCCCTCTCCAGCATCTTCTCTACAACCTTGCCCTCGGCCCAGCGCACCAGTAACACCGGCGGGGGTGGCAACAGCCCACCCTACTCCACGCAGAAAAACTCCCCCGCTGCGCTGCGACGCATGGGCTCCACGAACTCTCGCTCAGGCAGTGCCAGCCGTACAACCTCGCCGTATCAGGCCTCTGCGGGGTCAACATCAGGCCGCATGGGCTCGCCTCTGACAATGGTGGAGAGCATCAACCCTCCACTGACTAAGCAGCCTACCCACTCGTCGTCTCCAGTAAGGGCTAGTATGACCGCTGTGCCCCAGCACTACAGCTCTACTCTGCCGCGCTCCATGCTCCACAACACTGACCCCTATGGACCCCAGAGTTACGACATTTACGAGAGGATGACGCGACCTGACAGCCTCACAGGAATACGGAGCTCATACGCCAGTCAACACAGCCAGCTGGGCCAGGACTTAAGGTCAGCCATGTCCCCAGACCGCCACATTGCACCAATCTACGAGGATCGGACGTTCCAGGGCCCTTTGTACCGTAGCCCCAGCCACACCCAGCAGGGCACCCTCTACAGGAGCACGTCAGGTGTGGGGAGTCTCCAGCGGACACCCAGCCAGCGGAGTACCATGATCTACCAAAGAAACAACTATGCTCTTAACACAGCAGCCACCTATGCTGATCCGTATCGCTCAGCACAGTACCGGCCCTCCGATCCCAACTGCGCTCGTCAGGCTGTTGTCGTGGATGATGGTGCTACCCGCTCACCCTCTATAGACAGCATCCAAAAAGATCCCAGGGAGTTCGCTTGGCGTGACCCAGAGCTGACAGAGGTGATTCACATGCTGCAGCACCACTTTCCCTCGGTGCAGGCCAACGCAGCGGCCTTCCTGCAGCACCTGTGCTTTGGCGATAATCGAGTTAAGTCTGAGGTGTGTCGACTGGGAGGAATTAAACATCTGGTGGACCTGCTAGACCACAAGGTCCTTGAGGTCCAGAAGAACTCTTGTGGTGCTCTGAGGAACCTCGTTTATGGGAAAGCTATGGATGAGAACAAGATCGCTGTGAGGAACGCAGGAGGTATCCCAGCTCTGCTCCGCCTGCTGAGAAAAACTGTAGATGCAGAAGTGCGGGAGCTTGTCACAGGGGTGCTGTGGAACCTGTCGTCATGTGACGCCGTCAAGATGACAATCATTCGGGACGCCTTAACGACTGTAACCAACACTGTGATCATCCCTCACTCTGGATGGAGCAGCTCCACCTTTGATGACGACCACAAGCTGAAGTTCCACTCCTCCCTGGTGCTGAGGAACACCACAGGCTGCCTGAGGAACCTGAGTTCAGCTGGTGAGGAGGCCAGAAAACAGATGCGGGTTTGTGAGGGCCTGGTTGACTCACTACTCTACGTCATCAAAGCCTGTGTTAACACCTCTGACTTCGACAGCAAGATTGTGGAGAACTGTATTTGCACTCTAAGGAACCTGTCATATCGTCTGGAGCTGGAGCTGCCGCCATCCCGGCAGATAGGGGGGGAGGAGCTAGACGGCTTACTAGAGAAGGAGTCGCCCagaaaagaggggggggggggggggagaaaaaaaaaaaagagcttgcAGGAAGACACCTGGGACGGTGTGGGACCCATCCCCGGCTTCTCCAAGTCTCCCAAGGGGGCAGAGATGCTATGGCACCCCTCGGTGGTTAAGCCTTACTTGACACTGCTGGCTGAGAGCTCAAATCCTGCCACTCTCGAGGGCGCCGCTGGGTCACTTCAGAACCTGTCAGCCGGCAACTGGAAGtTTGCAGCATACATTCGTGCAGCAGTGCGTAAGGAAAAGGGTCTGCCCATCCTAGTGGAGCTGCTGCGGATGGATAACGACAGGGTGGTGTGTTCAGTTGCCACTGCTCTGAGAAACATGGCGCTGGATGTCAGGAACAAGGAGCTCATAGGGAAGTATGCGATGAGGGACCTGGTCAATCGTCTCCCCGGGGGAAACACCACCCTGCTGTCAGACGAGACGGTGGCGGCCATCTGTTGCACCCTGCACGAGGTCACCAGCAAAAACATGGAGAACGCCAAGGCCTTGGCTGACACGGGCGGCATTGAGAAGCTGGTCAACATCACCAAGGGCAGAGGAGACAGGTACTCTATGAAGGTGGTAAAAGCAGCTGCTCAAGTGCTGAACACACTGTGGCAGTACCGGGATCTGCGAACCATCTATAAGAAAgatggatggagccaaaacCATTTCCTCACTCCAGTGTCAACACTTGAACGGGACAGGTTTAAGTCCCAGCCCACCCTCCCCACCAGCACCATTCAGATGTCCCCAGTCAACCACCCTGCTGTCAGTGCCACGTCGTCTCCTGCCATGCTGGGCATCAAAGAGCATAGAGACACTATCAGAGATTACCAGAGAGCACAGTCAACTATGCAATTTTATAATTACCAAGGGGACAACAGTATCCATAAAAAGCAGTATACAGgGTCTGGAAAACCTTCTCCATATTATTACTCATCCCCCACAAGAGAGGAGCCCCGAAGAACACAGCCTGTGTATTATACAGAGGAGCCTGGCAGGAGGAACTACGACACGTACAGAATGTACCTGCAGCATCCCCACGGCTACGACGACCCTTACTTGGAGGAGGTCATCACCTACCCGCCCACAGTCGACTACAGCTCCCAGCCTCACGGACTGAAATCAACCACCAACTATGTGGACTTTTACGCTAGCACGCGGAGGCCGTCCTACAGGGCGGAGCAGTACCCTGGCTCTCCTGACTCCTGGGTATAGGCCTGGAGCCACTCCTGAGGGGCGTCTCCTCCCCTCAGCCGAGGCGAGGAGCCCGGGGAGCACACAAGaaccgacaaaaaaaaaaataacgtttTCATGAACTTGGCTTCAtaagtgtgtttgttttaaagtgaatgcctgtgtgtgtgaaggatgAATTCAACTGAGCGATAGCAGATGGAAAGATGGAATGTGTGCCAAAGAAGGAAATCAaggaatgtttttgtttttttaatattatttttaaatttagtaGAGGAAGATGGAATCATGCTGGGGATCTGTTGAGGGACGGGACCATACGCTACAGCGAGGAGACGTGCGTCCTGCTCTGTCTAGATgttagttttattttctttatgaaACTCTTAGCTGTGATAGCATGGTGAAAGGTGCGAGTCATGTGAGCGAGGGTCGGTGGTAAGAGTCAAGATGGGGAATGTGTATGTGCTGAAGCCAAAATGGATCATGGACTCATATTcgttaaaaaaatgaataaataaataatagtaaACTAATGATGTTAGATTGTACAGAGGGATCAAATTGTATCTGTACTTTATGTTGAAGCTGTGTAATGCCATGGAGTCTtgtacatttatttcattttattgtaaatactgaaaaaaaaaaaacatgttaccTGGTTTACACTCATCAgcactggtttaaaaaaaaaaagaaacgtgcCATGTCAAATCTCtatagatatataaatatatgaagaAATATGTGGACAAAGATGGCATCATAACACAACCAtgctaaaataataaaaggtcagttttgttttttaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818606.1 True 4526 mRNA 0.53 23 16013565 16096337

Neighbor

gene id symbol gene type direction distance location
upp2 upp2 coding upstream 32666 15978286 ~ 15980899 (+)
LOC120570324 NA coding upstream 103713 15902687 ~ 15909852 (+)
kcnj3a kcnj3 coding upstream 316991 15668278 ~ 15696574 (+)
fmnl2a fmnl2,LOC102797926 coding upstream 447723 15515461 ~ 15565842 (+)
pttg1ipb LOC104944099,LOC103370189 coding upstream 507977 15502117 ~ 15505588 (+)
tanc1b tanc1,LOC101475961 coding downstream 9099 16105436 ~ 16207591 (+)
tank tank coding downstream 221037 16317374 ~ 16322778 (+)
tbr1b tbr1 coding downstream 240872 16337209 ~ 16341623 (+)
slc4a10b slc4a10 coding downstream 247698 16344035 ~ 16377228 (+)
scn1laa LOC103371728,LOC103392165,LOC101464243 coding downstream 563644 16659981 ~ 16685486 (+)
G124229 NA non-coding upstream 101137 15912215 ~ 15912428 (+)
LOC120569337 NA non-coding upstream 122559 15888137 ~ 15891006 (+)
LOC120570206 NA non-coding upstream 273607 15715606 ~ 15739958 (+)
G124150 NA non-coding upstream 446104 15536535 ~ 15567461 (+)
LOC120569294 NA non-coding upstream 597361 15415408 ~ 15416204 (+)
G124323 NA non-coding downstream 184262 16280599 ~ 16280878 (+)
G124325 cd302 non-coding downstream 184607 16280944 ~ 16285287 (+)
LOC120569637 NA non-coding downstream 208426 16304763 ~ 16310641 (+)
G124339 NA non-coding downstream 284910 16381247 ~ 16381693 (+)
G124371 kcnh7 non-coding downstream 318272 16414609 ~ 16416452 (+)
LOC120570321 NA other upstream 35691 15970982 ~ 15977874 (+)
galnt13 galnt13,LOC102796746 other upstream 352551 15618514 ~ 15661014 (+)
sumo3b sumo3,LOC106562996,LOC107668404,LOC106523318 other upstream 439717 15506984 ~ 15573848 (+)
trpm2 trpm2 other upstream 854628 15137587 ~ 15158937 (+)
si:dkeyp-118h9.7 LOC102200331 other upstream 1019731 14976595 ~ 14993834 (+)
dap1b dapl1 other downstream 2934 16099271 ~ 16101642 (+)
col28a2a LOC103355072,LOC104961148,LOC102781941 other downstream 891734 16988071 ~ 17023560 (+)
myo3b myo3b other downstream 1031544 17127881 ~ 17198590 (+)
hoxd10a hoxd10,LOC102792757 other downstream 1763823 17860160 ~ 17881328 (+)
hnrnpa3 hnrnpa3 other downstream 1914420 18010757 ~ 18017413 (+)

Expression


Co-expression Network