upp2 (upp2)


Basic Information

Item Value
gene id upp2
gene name upp2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 15978286 ~ 15980899 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818611.1
GTTACAGCTATATCAGCTCTGCAGTCAGACGTATCTCGTATTTAGAAACAGCTGCAACGAGTATCTGGAGGTTTTACAGAAGAACAACTTTTGAAGACattttatatttgattttaAAGCAGTCATGGCACCAATTATACTTGACCATATGGGGAATGACCAAAATGAGTATATCAAACAACACGTCCAAGTGAAAAATCCTTACTTGGACACCATGGAGGAGGATATTCTCTACCATTTCAGCTTGAGCACCAAGACTCACAACCTCCCAGAAATGTTTGGAGATATTAAGtttgtgtgtgttggaggcAGCGCAAATCGTATGAAGGCTTTCGCCCAGTTTATCCACCAGGAGCTGGAACTGCCTGGAAACCCAGAGGAAGTCAGAGATATCTGTGAGGGAACTGATCGCTACTGCATGTATAAAGTAGGACCTGTGCTTTCTTTAAGTCACGGCATGGGTGTCCCTTCCATCTCCATCATGCTGCATGAGCTCATCAAACTGCTGCACCACGCTCAGTGCAGTGATGTGGTCCTGATTCGCCTTGGTACATCCGGTGGAGTCGGTCTGGCTCCAGGGACGGTGGTGGTCACGAATAAAGCAGTGGACTACTCCTTCCTTCCCCAGTTTGAGCAGGTGGTTCTGGGTAAAGTCATTACCAGGAGCACTGAGCTGGATGAGGGAGTGGCCAATGAGcttctgcagtgctctgccGAGCTTCAAAGCTTTCCTACGATGATTGGAAACACCATGTGCACCCATGACTTCTATGAAGGTCAAGGCCGACTCGACGGCGCGCTCTGCTCCTTCTCTCATGAAGAAAAACTGGAGTATCTGAGGAAAGCTTATGAGGCCGGAGTGAGGAATATTGAAATGGAGTCCACTGTATTTGCTGCTATGTGCCGTGTCTGTGGCGTCAAAGCGGCTGTGGTCTGTGTTGCATTGCTGAACCGCTTTGACGGAGACCAGATCACCTCCCCCCACGATGTTCTGGTGGAGTACCAGCAGAGACCTCAAGTCCTGGTGTCCCACTTTATCAAGAAACGCCTGGGACATATTGTCTGAGACCCCTACATCTCCCATCCTATCCCAACCCCAGCCTCTCAAATGTGTATATAGCTGATATGTGGATATGTATATACATAACATGTTAATATGTGTGTTAGACACTTAtttaaaacattgttaaaatgtttaagATTTCATTGATGAAGCTAAAATATTAAGTGTGTCGCATACGTATATGTTAGTATGTACAGTATTGtatcttttaatatttaacactgtTATTTATGTAAGGTTACATTAATTTTCTAAAGAATAGTACTGTATGTTGATTTTAATATTTGACTTACACTTATAACTATAGTTATAACTAACTATGTATTAGCAAGTTGGTAAAATGATCGCCCTCCATTGGAGGTTTGCAATCTGTCAGCAGCCTCTAGTTATAAAGGTTTTTCCTCCTATATGCTTGTTAGATGGGAAGTATTAGTCCTTAGTGGTTTCCCTCATGATACAAGAAGATGAAGTGGGCCTTCCTACAATGTATTTCAGTGATGAATGTGTTATCAGATGACTAGAGgcatacattacattttagttgCTACTGCCACACAAGCTTGTTTATGCAAATGCGAACTTCCTGAAACTAACATAAGCGGTCAATAAATATTGATAAATGTGCAGAGGTGATTTGTTTGAGGTACATGTTTATCATTACTCAGTGATACTGTATGACACTGTATAGCTCATGAGATGCTGTAGAATACATAACCTTCAATAAAAGTCAATAACAGTAA

Function

symbol description
upp2 Predicted to enable uridine phosphorylase activity. Predicted to be involved in UMP salvage. Predicted to act upstream of or within nucleoside metabolic process and nucleotide catabolic process. Predicted to be located in cytoplasm. Orthologous to human UPP2 (uridine phosphorylase 2).

NR:

description
PREDICTED: uridine phosphorylase 2

GO:

id name namespace
GO:0009116 nucleoside metabolic process biological_process
GO:0009166 nucleotide catabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0004850 uridine phosphorylase activity molecular_function

KEGG:

id description
K00757 udp, UPP; uridine phosphorylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818611.1 True 1803 mRNA 0.42 7 15978286 15980899

Neighbor

gene id symbol gene type direction distance location
LOC120570324 NA coding upstream 68434 15902687 ~ 15909852 (+)
kcnj3a kcnj3 coding upstream 281712 15668278 ~ 15696574 (+)
fmnl2a fmnl2,LOC102797926 coding upstream 412444 15515461 ~ 15565842 (+)
pttg1ipb LOC104944099,LOC103370189 coding upstream 472698 15502117 ~ 15505588 (+)
myo10l3 LOC103370188 coding upstream 478089 15443454 ~ 15500197 (+)
LOC120570318 NA coding downstream 32666 16013565 ~ 16096337 (+)
tanc1b tanc1,LOC101475961 coding downstream 124537 16105436 ~ 16207591 (+)
tank tank coding downstream 336475 16317374 ~ 16322778 (+)
tbr1b tbr1 coding downstream 356310 16337209 ~ 16341623 (+)
slc4a10b slc4a10 coding downstream 363136 16344035 ~ 16377228 (+)
G124229 NA non-coding upstream 65858 15912215 ~ 15912428 (+)
LOC120569337 NA non-coding upstream 87280 15888137 ~ 15891006 (+)
LOC120570206 NA non-coding upstream 238328 15715606 ~ 15739958 (+)
G124150 NA non-coding upstream 410825 15536535 ~ 15567461 (+)
LOC120569294 NA non-coding upstream 562082 15415408 ~ 15416204 (+)
G124323 NA non-coding downstream 299700 16280599 ~ 16280878 (+)
G124325 cd302 non-coding downstream 300045 16280944 ~ 16285287 (+)
LOC120569637 NA non-coding downstream 323864 16304763 ~ 16310641 (+)
G124339 NA non-coding downstream 400348 16381247 ~ 16381693 (+)
G124371 kcnh7 non-coding downstream 433710 16414609 ~ 16416452 (+)
LOC120570321 NA other upstream 412 15970982 ~ 15977874 (+)
galnt13 galnt13,LOC102796746 other upstream 317272 15618514 ~ 15661014 (+)
sumo3b sumo3,LOC106562996,LOC107668404,LOC106523318 other upstream 404438 15506984 ~ 15573848 (+)
trpm2 trpm2 other upstream 819349 15137587 ~ 15158937 (+)
si:dkeyp-118h9.7 LOC102200331 other upstream 984452 14976595 ~ 14993834 (+)
dap1b dapl1 other downstream 118372 16099271 ~ 16101642 (+)
col28a2a LOC103355072,LOC104961148,LOC102781941 other downstream 1007172 16988071 ~ 17023560 (+)
myo3b myo3b other downstream 1146982 17127881 ~ 17198590 (+)
hoxd10a hoxd10,LOC102792757 other downstream 1879261 17860160 ~ 17881328 (+)
hnrnpa3 hnrnpa3 other downstream 2029858 18010757 ~ 18017413 (+)

Expression


Co-expression Network