LOC120570324


Basic Information

Item Value
gene id LOC120570324
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 15902687 ~ 15909852 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818616.1
TGTAGGCCGATATTTTCCTgcctatctgtccaatcagagtatACTGACAGGGTGGAAGTTGGTCGCTACGTCCTCATACAGAACTGACAGTCAAAGTTGTAAAGTGGAGATTCTGCGAAGAAACCCACAACTTTAGCTAGTTAAGTTTCTTTTAGTGACGAAGAAGATTTTGCGAGCATAATGTTCCCCGGCGGCTGAAGGTGACCGAAGCGGTTATGTTACGGTATGGGAACATAATATTACATTGTACCTTTGTGCTGGGCTATGGGTGTCGGACGCTGCTGTGTTCTTGACTGACAACATCGACTAACGTTACCTCTGTTACGTTTCTAGCATGCCACGCAGGCAGCTAACTTctccaaagaaaagaaaactttgcCTACAACTCAGAAGTGGCCCACACAGTACgctattttgacattttctatattttcacgtggacttttttcttcttttttttaaacccgaGAATGATTAAGATTAGGAGATACTTAAGGGGGAGTGGGAGGGTACTCGCATTTGTGTTCATTGCTTCTGTCATTTGGCTGCTGCTTGACATGGCTGCTCTTCGCTTATCAATAAACGATGTGAACAGTCAGCTGCTGAAGGAGCGAGTGGTAAGAGAAAGGGAGGTTTTCAAACAGCAGTCCAGGGTGACACAGGTGGTGAAAAGGGGGTTTAAACACCCAGTTCAGAGAGTGGACTTTGCTGTTACAGATGCAGGTAAAGCACCACTCAGTTCAAGCATCAAATTAGCCCAAGTGtacagacagggagacaagaAACAGGATAAAATGTTGGGGAATCACCAAGGAGATAATCTTCCCAAGACTGACCTCCCAAAATATGTTGTTTCTGAACATAAAAAAGGAGCCGCTGTACAAAATGTCACGCCAAAGCAGGATGTTCCTGCAAAGAAAAAAGCAGTAAACTTAGATCTGATCGGGATGAAATCAGAGAAAAGTAGAGTAATAGATGACTCTATTAAAGGGGTGTTACCTGTAGTAGTACCTAATATAACCCAAGTGCCACCTGGTGTTCAGGAAAACCAACATGCTCCGCTACCAACCTCAAAAAAGGGACCCATTAAAAATGGAGATGTTGTGCAAAATGCTCTGGAGAAAACTGATTCAAAGACAAATGAAAAAGTCAAGGATGAACTTAAGACCAAGACTGAAACAAAAGTGAGTAAGCCTAAGGCCGAGGAGGTACACCCTgttaaaacaacatttaaaccTCCAAATAAGGATGTAAAAGGAAAGGAGGTAGATATTGAAACAGAGGAGAAACACGTTGGGACGATCGCCAAGAGTGACCTGAAGGCAGCGAAGGAAACCCTGAAACCTCCAATCAAGCTCCAACCAGGAGAGGACTCAAAGGATAACTCCCCTGCTGTCAGAAATCCAGGTGTCCACAAAGTGCTTTCTCTGGATGTGACTAACGCTCCCAGAGATGCCAACGCGATGGGCCAGTTTGGTCAGGCAGCAGTTGTTGGCAGTAACGAAGATGCGGAGGTGAGGAAGAGATGGAACGAAGGGCATTTTAATGTCTACCTAAGCGACCAGATCCCAGTGGACCGTGCCATCCCAGACACGAGGCCTAGCATGTGTGCACAGAATCTGGTCCATGATAACTTGCCTTCCACCAGTgtgattttctgttttgtgGATGAAGTGTGGTCCACACTCCTCCGCTCTGTGCACAGTGTGCTCAACAGATCTCCGCCACACCTCCTCAAAGAGATCATTCTGGTGGATGATTTCAGCACAAAAGacTATCTGAAGGAGCCGCTAGATACATACATGTCCCAGTTTCCCAAAGTGCGAATTATTCGTCTGAAGGAGCGTCAGGGCCTGATCAGGGCCAGGCTGGCGGGAGCTGCTGTAGCCAAAGGTGAGGTTCTTACCTTCCTTGATTCCCACATTGAATGTAACGTGGGCTGGCTGGAGCCGCTGCTGGAGAGAGTCTATCTGGATCGCAAGAAGGTGCCCTGTCCAGTTATTGAAGTCATCAGTGATAAGGACATGAGTTATATGCTGGTTGACAACTTCCAAAGAGGTATTTTCAAATGGCCTTTGGTGTTTGGCTGGAGCGCATTACCAGAAGACTACATTAAGAAGAATAACATGACCATCTCAGATCCTATCAGATGTCCAGTTATGGCTGGAGGCCTTTTCTCCATAGACAAAAAATACTTCTATGAGCTTGGTGCCTATGATCCTGGTCTGGATGTGTGGGGTGGGGAGAACATGGAGATTTCATTTAAGATCTGGATGTGTGGAGGGGAAATCGAGATCATCCCCTGCTCTCGAGTGGGACACATCTTCCGAGGACAGAATCCTTACAAGTTCCCCAAAGACAGGCAGAAGACAGTGGAGCGTAACCTGGCGAGGGTGGCCGAGGTCTGGCTGGATGAGTACAAGGACCTTTTCTACGGCCACGGCTACCACCACTTGCTGGATAAAAAGACCATTGACATCGGCAACCTCACCGAGCAGATTGAGCTGAGGAAAAGGCTGAAATGCAAGAGCTTCAAGTGGTACCTGGATAATGTGTATCCAGATATGAATCCTCATTTAGTCAAAGCCGAGGGTCTGGTCTTTAATCGTGGCGTAAGAAAATGCCTGACTCTGCAGAAAGGCTCTCTGTCGTTTGAGATGTGTGACCTCAGCAAGCAGAGTCAGCACTTTAATTACACCTGGATGAGGCACGTTCGCCAGCAAGATATTTGCGTCACTCCCCACGGCAAGGGCAGCGGCTTCGCTTTGCAATTATGTGACAACGCCAAGCCTGAACATCGCTGGTTCCACAAATCATCCAAATCCGCTCTGgCGGAGCACCTCATAGCAGAGTTTGTTTCCCACCACATGTGCCTGGAGGCGGGGCCTCAGGGTGACACTCTTCGCCTCAATCCATGTGAAACCAGAAACGCCTTCCAAAAGTGGCAGTTCACACACTACTACGCTGAGTGATGAGACTGAAACGTGTTAAACATGCACTATAGATACCTTCAGTGGCATCACACTACAGTACAGTCTGTGGTCCAGACTCAACACGTGGCTGTCCAGAGGAGGTGGGAAGCACTTTGGTGGCAGTAACATTTGTGGTGTAAAGCAGACGGTGTGGGGATGTGCAATGCTTCtaatttcctttttattatATCAGCCTGGAGTGACCTTGAGTTTTACACACTTGTGCCAGAGGAATAAGGGCATCTTCTCTCCATTTGGATAGATTTGGACCAGAGTTTGCTAAAGGGGTTCAGGTAAATTTCTATGGAATAACACTTAATATCTAGCACAACATATCATCTCACTGCCAAAGATAAACCGTGCCTCTTAGATATGAGATGTAAAAAGTAATTTTCTCTGCTGGGACTGAATAATAATGATGTTTAATtgcatgtaatgtaaaatgtatacatttgtattaaACATATCACATTTGTACTTTTATGTTTGAGGCACATGGGTGAAACAGCTGCTTCTGTGGTTTTTAAATGCTGCGTTGTTTAGGTGTAGGTTTTGTTGTGAAAATTGTCCATTTGTATGAATATCTTCTTGTCACTAGAGGGAAGTGTTGGTTcaaaacatgcaataaacctCTGCTGTGATTTCA

Function

GO: NA

KEGG:

id description
K00710 GALNT; polypeptide N-acetylgalactosaminyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818616.1 True 3618 mRNA 0.46 10 15902687 15909852

Neighbor

gene id symbol gene type direction distance location
kcnj3a kcnj3 coding upstream 206113 15668278 ~ 15696574 (+)
fmnl2a fmnl2,LOC102797926 coding upstream 336845 15515461 ~ 15565842 (+)
pttg1ipb LOC104944099,LOC103370189 coding upstream 397099 15502117 ~ 15505588 (+)
myo10l3 LOC103370188 coding upstream 402490 15443454 ~ 15500197 (+)
ankzf1 ankzf1 coding upstream 476009 15420802 ~ 15426678 (+)
upp2 upp2 coding downstream 68434 15978286 ~ 15980899 (+)
LOC120570318 NA coding downstream 103713 16013565 ~ 16096337 (+)
tanc1b tanc1,LOC101475961 coding downstream 195584 16105436 ~ 16207591 (+)
tank tank coding downstream 407522 16317374 ~ 16322778 (+)
tbr1b tbr1 coding downstream 427357 16337209 ~ 16341623 (+)
LOC120569337 NA non-coding upstream 11681 15888137 ~ 15891006 (+)
LOC120570206 NA non-coding upstream 162729 15715606 ~ 15739958 (+)
G124150 NA non-coding upstream 335226 15536535 ~ 15567461 (+)
LOC120569294 NA non-coding upstream 486483 15415408 ~ 15416204 (+)
LOC120569306 NA non-coding upstream 652858 15243198 ~ 15249829 (+)
G124229 NA non-coding downstream 2363 15912215 ~ 15912428 (+)
G124323 NA non-coding downstream 370747 16280599 ~ 16280878 (+)
G124325 cd302 non-coding downstream 371092 16280944 ~ 16285287 (+)
LOC120569637 NA non-coding downstream 394911 16304763 ~ 16310641 (+)
G124339 NA non-coding downstream 471395 16381247 ~ 16381693 (+)
galnt13 galnt13,LOC102796746 other upstream 241673 15618514 ~ 15661014 (+)
sumo3b sumo3,LOC106562996,LOC107668404,LOC106523318 other upstream 328839 15506984 ~ 15573848 (+)
trpm2 trpm2 other upstream 743750 15137587 ~ 15158937 (+)
si:dkeyp-118h9.7 LOC102200331 other upstream 908853 14976595 ~ 14993834 (+)
G123742 NA other upstream 1668617 14233332 ~ 14234070 (+)
LOC120570321 NA other downstream 61130 15970982 ~ 15977874 (+)
dap1b dapl1 other downstream 189419 16099271 ~ 16101642 (+)
col28a2a LOC103355072,LOC104961148,LOC102781941 other downstream 1078219 16988071 ~ 17023560 (+)
myo3b myo3b other downstream 1218029 17127881 ~ 17198590 (+)
hoxd10a hoxd10,LOC102792757 other downstream 1950308 17860160 ~ 17881328 (+)

Expression


Co-expression Network