LOC120570328


Basic Information

Item Value
gene id LOC120570328
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 28609691 ~ 28611484 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818620.1
AAGCTGCCAGATCTCAGCAGCCTCTCGTCTCCGTTTCTCTCTCTGATGACGGAGACTCTGCAAGACGCTGAACTCTGCTTTCCACAACTACTCAACACCTCTTGCAGGAAGCCAGTGCAACATCGTGCTGAGACCATATTTCTTTACATTCTGCTGTCTTGCATCTCTTCGCTCACTGTGGCTCTCAACCTGCTGGTCATCATCTCCATCTCCCACTTCAGGCAGCTCCAGAGCCCTACCAACCTGATCATTCTGTCATTGGCGGTCTCAGACTTCCTTGTTGGCCTCCTGCTTATGCCGGTTCGAACTCTCCGTATAGGGGGCTGCTGGGTTTTGGGCAGCTTgacatgtggactttttaactATGCCTCTTATATCCTTACATCTGCATCAGTAGGAAACATGGTGCTCATATCAGTTGACAGATATGTTGCCATTTGTGACCCTTTGTGTTACCCCACCAAAGTCACTCAGAATAGagttaaaatgtgtgtttgcctgtgttgGGCCTGTTCTGTGTTCTATAATGGGGTGATACTGATTGACTTTCTAAAACATCCAGATCAATACAATTCCTGCTATGGAGAGTGTGTAGTTGTAATTAACTACATAACAGGAGCTGTTGATGTCATGTTGACCTTTGTTGGCCCCATTGCTGTTATCATAGTtctgtatatgagagtatttgtggtggctgtgtctcaggctcgAGCCATGAGGTCTCATATTGCAGCTGTTACACTCCAGGATCCGGTTACTGTAACCGCAAAGAAATCAGAGAGAAAAGCCGCCAGGACTCTTGGTGTTGTCGTAGTTGTGTTTCTAATATGTTTCTGTCCTTATTTTTATCCCTATATCGTGGGCCTGGACTTGTCAACCAGTGTGGATTTTTCAATTTTTGGGACCTGGCTACTTTATTGTAACTCCTGTCTAAATCCAGTAGTGTATGCATTTTTCTACCCATGGTTTAGAAGATCTATTAAACTAATTGTTACACTTCAGATACTACAGCCTGATTCCTGTgatgccaacatactgtagagaTGTCTGTAGAGTGACTGAAATGATGCCGCTGCTAGTTTACGGGACAAATAAGTGCTGTTCATTAAGATATTCTTCAGCATGTCATCACCGAGTTGTTTTCCAAcagatatattttttctttataaaaGTGAAAATACTGATCACGTCTTTTGGTCACTAAAATCAACCATCTTATGTAAACTGGATAGGAacagaatttcttttttctaaGATAACCTGGACTTGATGTGAACATTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818620.1 True 1282 mRNA 0.43 2 28609691 28611484

Neighbor

gene id symbol gene type direction distance location
LOC120570107 NA coding upstream 112089 28492168 ~ 28497602 (+)
LOC120570105 NA coding upstream 121941 28484923 ~ 28487750 (+)
fer1l6 NA coding upstream 159741 28414638 ~ 28449950 (+)
ttll4 ttll4 coding upstream 227384 28362132 ~ 28382307 (+)
abcb6b LOC101063776,LOC107092899 coding upstream 269970 28289987 ~ 28339721 (+)
LOC120570124 NA coding downstream 96058 28707542 ~ 28708882 (+)
LOC120570350 NA coding downstream 124114 28735598 ~ 28737558 (+)
raph1a LOC103372763,LOC102310239 coding downstream 192760 28804244 ~ 28892620 (+)
LOC120569951 LOC104957843,LOC103367760,LOC105922114,LOC103149907 coding downstream 694342 29305826 ~ 29307000 (+)
LOC120569953 LOC107102032,LOC105922254,LOC104957841,LOC105922255 coding downstream 698870 29310354 ~ 29311230 (+)
G127701 NA non-coding upstream 75519 28533943 ~ 28534172 (+)
G127665 NA non-coding upstream 224049 28385417 ~ 28385642 (+)
G127623 NA non-coding upstream 265893 28343492 ~ 28343798 (+)
G127613 NA non-coding upstream 381241 28228096 ~ 28228450 (+)
G127570 NA non-coding upstream 666069 27938694 ~ 27943622 (+)
LOC120570261 NA non-coding downstream 100947 28712431 ~ 28713525 (+)
G127747 NA non-coding downstream 281179 28892663 ~ 28895512 (+)
G127762 NA non-coding downstream 304488 28915972 ~ 28916196 (+)
G127784 NA non-coding downstream 326667 28938151 ~ 28938490 (+)
G127806 NA non-coding downstream 373216 28984700 ~ 29044221 (+)
prkag3b prkag3,LOC103374929,LOC105937223,LOC107101406 other upstream 199852 28388643 ~ 28409839 (+)
LOC120569906 NA other upstream 1892294 26713350 ~ 26717397 (+)
zmym2 zmym2 other upstream 2125603 26449443 ~ 26484088 (+)
mphosph8 mphosph8 other upstream 2170406 26411477 ~ 26439285 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other upstream 2479812 26116988 ~ 26129879 (+)
G127814 itgb5 other downstream 417418 29028902 ~ 29041224 (+)
LOC120569952 LOC103367759,LOC104957842,LOC103482036,LOC106947595,LOC102235455,LOC102799479,LOC101465930,LOC102199775 other downstream 685000 29296484 ~ 29299361 (+)
G127932 LOC103367765,LOC102202048,LOC100700231 other downstream 847660 29459144 ~ 29459978 (+)
G127935 LOC103149918,LOC106933234,LOC104960782,LOC104932527,LOC108238793,LOC103482149,LOC105920790 other downstream 855660 29467144 ~ 29474550 (+)
G127938 LOC100695514,LOC102778272,LOC103367768,LOC104960783 other downstream 864628 29476112 ~ 29478950 (+)

Expression


Co-expression Network