stk17b (stk17b,LOC103370988)


Basic Information

Item Value
gene id stk17b
gene name stk17b,LOC103370988
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 4513666 ~ 4526011 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818643.1
TGCGCATGCGCCAAGCCGTGACGTGTCGCGAAAGTGTCAAACCGAAGGATGTAAAAATGATCGAAAACACTCGAGATAAACTTACTAAGATATTTAGTAGTCGCCCACAGCGGCAGTTTGGATAACTTAACCCCTGGAGTCAGCCGTAGCTGTAAATGTGATAGACTAACCACTCCTCTTCAGTTGAGCAGAGGAAATAGGTTTAACTCACTTTTGGACCCGCGACATTGACCGTCGAGCTAACTTAGTTAGCGACAGTTGAGCTAACCGGACTCGGTGAAGTAGCCAAACTAAACAGTAGCTAGCATGGTACCGTTAACCGGCTTATTTAACATTGCCATGTAGTTAATGTGAAACTGGCAGTGTAAACGTTAGAATAGCCACTTGGTTAGTTTGGTCGTTCGTCTCTCATTTAGCTTTCAGCGCGGTGACGTTAACGTATCCAGCTGGCAAGCAGGACTGACCTACGGAGAGAAGATGTCTCGGAGGCGGCTGGACAGTCGCAGCGGGCTCGCAGCTGGTCTGCTCGGCGAAATTCAGACCCCAATCAGCACGGAGCCGATGGAAAGTGTGTATGAAATCACTGGAGAGCTTGGAAGGGGGAAGTTTGCGGTGGTCAAGCGCTGTGTGGAGAAGGCCACGGGGAAAGTGTTTGCTGCCAAGTTCCTACGGAAGAGGAGGCGAGGCCGTGACTGCCGGGCCGAAGTGATCCACGAGATGGCCGTCCTGGAGGCGGCCCGTAACAACGCCCGAGTGGTCAACCTGCACGCGGCTTACGAGACCGATCACGACATTGTCCTACTGCTGGAATATGCGGCCGGTGGAGAGATATTTGACCACTGCGTGTCTGAGGAGCTGCTGCCAGAGGCCCAGATCACTCGTCTGATCAGGCAAACACTGGAGGGAGTCCACCATCTCCACCAGAGCAGCCTGGTGCACTTAGACCTCaagCCGCAGAATATTCTCCTGACCAGCCTGTGTCCTCCAGGAGACATCAAGATCGTGGACTTTGGCCTGGCACGCAGACTGGGCGCGGTTGGAGAGCTCCGAGAGATTCTTGGCACGCCTGAATATGTGGCTCCTGAGATCCTGAATTATGAGCCAATCACGACAGCCACTGACCTATGGAGCGTGGGTGTTATAGCCTACATGCTGGTGACGGGCGAGTCTCCGTTTGTCGGGGACGACAAGCAGGAGACGTATCTGAACGTGTCCCAGGTCAACGTGGACTACAGCAGGGAGGCCTTCTCCAGGGTGTCTGAGCTGGCTGTGGACTTCATCCGCAAGCTGCTGGTCAAGACCCCCGAGGACCGGCCCAGCGCTGCGGAGTGCATGAGCCACCCCTGGCTGTGGCAGCTGTGCCTCAGCCCCGACCACACCACCGCCACCCGCACCGTCCGCGACAGGAGCTGCGGCACCAAGTGGGCAGCGCCCCCCGAGGACCCCGAAGACAAGGAGAACTTCCTGGACTCGCCCCACTCTCACGCAAAAAGGTTTCGCTTCGACGAGGAAAGGCCCGCTGCTGGAGACGGTGACTTTtgaaaacgtttaaaaaatacaaaaaaaacagggcAGGGCAGGGGATGCTCACTCCTTCCTGTGAGCTTTTAAATTCTTTTAAGCCTCCAGAAAACCAGCAGTCCACTGTCACCACTCAAAAGTACTTAGGTTGTGTTTATATTTCACTAATTTTTCAAAATTCCAAGATCGACCATCCAGACCAAAGATAACCAGCTAAAATGTTGAGATCTTTCCGTGATCCAGCGCTGTTAAGAAGTGTGGaaattgtacagtatgtcttaaTGAATGCAGTGTGTTTAACCTGAAGTGTTCAATACCTTTCATTGTTCAAACCTCTGGTATTTTCAGAGCCCACTCTGTGTTGGGGCATCGTTGATCCTGTACTGATGAGGGCTAGTGTGGAGTATTTCTGGGGAAATCTATGCAATGCTTCTCTTGTACATTTTAAATCTATTTTCCTAAAACCTTAAAGAAGTTAGCAGCGCTCCGCCTTAAGCTCGGAAGTTAAGTGTTCTTATGCTTCAGCGGAAACGTGTGAGTGTGAGAATCGAGATAAGAGGAAGTGTGATAAATGTCCTCATTTGCATGCAGAAGAGACCGAGGGACAGCTGGACAGCTGCGTCACGGGGAAACGCTTTGACTCCGATTATGTTCTCGGCGCGTGGGTACCTGTCATTCAGTCACCATTTCATGGAAAATTCATAAAACATGGCTGCTGCCTATGCCTCAGCTCTATCTCTTACTACCTGCAACATGGCTGGATTTCACATCCAAGCTGCACGTGGCCATGAAAACACCCAGCAGAGAGGCTGACTTACACACAAGCCTGAAACATTCCTTATATGTTTGTCTCCATGTCTGCAATAGCACCAGGGTTTCTATTTAGCTCAGGATTTTATAAAACTCATTTTATTAATTCCAACCTTAGCGTAGTCCCCTTCCGAACAATTCTACTTCTCCCACATttattatgaattttttcaatGCCAACATGAGCAACAAATCCCGGTATTTTCCGGCATTCTCGTAAGATAGAAACTTAAAACTGTACACcggctgaaaaaaaaataacaaaaaacacaacccaAGTTGACTCATGCAGTTTTTCACATGCCACACCTACGCTTACTCAAATGATTTCCTCACCGAGCTGCAAGTTCCTCTTCTGTTGGCCGGAAAAAGAGAAACACAACTTTAGCACTTACTTCATCATCCCGCTTGTTGAACCGCTAagcaaaaaaggggggggggggagctgtTGAtgaaagtgtgtctgtgtgcttgttCCTGAGAGGTGGCCTCTCCAAAGCCATTCAGTGTCCTTTCTCTAAACGCTCCTCCAGTCCTGTTGGCTCAGGGTGCCCAAACTTATATTCCTGTTCTCATCTCAGGGCATGCTGCTCTCTGCTCACTTTGTATTGTATTCCTAATGTTATTCTTAAaggcctattattattattattattattattattattatttatgtgcTGGACTTatactttatatttttatgtaaataatGTGCTCATGTGTCTTATTATAAGGAAGTGTTGATGACGGTGGGAGAGGATGATACCGGTGTTATGTAAACCAGCTGGTGTGGTTCTATGAAATGGGAAGGTCTGACTGCAGCGGATCGGGAAGATGAAAGCAAAGAGCAGTTTGTCGATGGTACCGGGAAGTAGAGCCAGAGAGGAGTCCGATGATTTCGGGTCAGCAGGCAGACGATGAAATACTACTCCGCAAAATGTGGAGTAGTATTTCAGTCTCAGTCTCGACCTGTCAGTCTCGAAAGAAGTGTTTAAAGGAAAATGTCGAACTAGTCCTTTTTTAAGTTGAGCGTTAAGATATGTAAGGCTTTTTGGGTGATGAGAAAGTAgaaatgatgattttttttatttaaatttttttttggtgtggttTTGAAAAAGAGACGGATGTTTGTCCCGAGAAGCGAGCCACTGTATAATATGAAATACGAGGTGCTATTGATTCACAGGATCTGCCATCTTTTGTTCGCTTgaatgagtttaaaaaaaaacaacccttcTAAAGTGCAGAACTGGCAACTCTGATTGCTCTTAATCTCCAGTGAAACATTCCGCTTTTTGTTCTGAGGTGCCAAACCCGAATAAGACCacattgtgttgtttgttgttgtcacCAGCTGGTACAATGGCCTTTGTGTGGGAGATGGGCGTCTCCAGCCACGGCCATGCTGTCATACTTAGAAAAACTGGAACACCACGCTGGAAACACTTTTCATCTCAACGAGTGATTTCATCTCGCCGAGTTAGCACATTCTACTTGAGCTTGTTGtaagatgtttgtttttttgtttttcttctaaaCAGCAGGAAAGTATAGCCAGAGAAGTCCCAGCATCTGTTTTGCTACTGTATAAGGAAATAAGCTTGAATCTCAAGAGTAAAGTACGTTCCAGTCGGTCTACTCTGCTTTTTCTAATACCTCTCCAAACAGGTGGCGGTGTCTTGAAATAATCTCAAATTCAGGCTGAGATGATGGGACTTGGCTCAGTTGTACAGAAACGAGTAAAGCTTTCCTGTTGCGTCTCTGAAAAGGCGATTTTAGGACTTGACGAGCAGCGTGATCTTGAGAGCACATTGGACTTGTTTTGCAGTGCAGTGATGTCAGGGATCTCACTTTGCAGGATGACGGAACGCTCGAATGGGTCGGACAGAGTGGCTCCTGTTAGCTGGCACTGTCTGTCCGCCACTCGAATATGACTTGTGCTGTGGTGTTGATTTCGTTATTTTCATCAGCTAGTCACTCATAGCattgggtgcgtgtgtgtgtgcgtgcgtgcgtgtgtgtgtgtgtgtgttttcattgtcTGAGCAGTGCTCAGCTGGCAGTCAGGTCGTCATCCTCACAAGGTGGAGCACCACTGATGTCACCCAACATTCCTGTTAGTTCTGTGTGAGCGCAGTGAGACTGAAGGATACTGTAGGTTACAGTCAAACCAGCCACAAGCAAATAAATGTTCCAGAGATGTATGTTTATATtgcattttatattgtttttttgttttttttaatgtatgagCACACTGATTGCATCTGaaaggacaaaaaaagacataatcCTTATCTTATTCTGATCAACTGCAGGCTAATATGTAGGCAtcacaaagcaaactgaaaaaGCTCATTAAAGGTTGTAGAAAATA

Function

symbol description
stk17b Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and positive regulation of apoptotic process. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in nucleus. Orthologous to human STK17B (serine/threonine kinase 17b).

NR:

description
serine/threonine-protein kinase 17B-like isoform X1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08804 STK17; serine/threonine kinase 17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818643.1 True 4711 mRNA 0.47 7 4513666 4526011

Neighbor

gene id symbol gene type direction distance location
hecw2a hecw2 coding upstream 1342 4450254 ~ 4512324 (+)
pgap1 pgap1 coding upstream 77315 4416853 ~ 4436351 (+)
maip1 LOC101475169,LOC100711160,LOC102305852,LOC102192410 coding upstream 97226 4409864 ~ 4416440 (+)
LOC120569241 LOC103373060 coding upstream 114792 4394058 ~ 4398874 (+)
LOC120570038 NA coding upstream 119644 4378415 ~ 4394022 (+)
ftcdnl1 LOC103370986 coding downstream 40528 4566539 ~ 4575421 (+)
LOC120569891 LOC103370984 coding downstream 60392 4586403 ~ 4675681 (+)
LOC120569284 lypd1,LOC103370990,LOC104920802 coding downstream 163803 4689814 ~ 4716613 (+)
sympk sympk coding downstream 272818 4798829 ~ 4815157 (+)
slc40a1 slc40a1 coding downstream 304669 4830680 ~ 4841508 (+)
G122024 NA non-coding upstream 65206 4448257 ~ 4448460 (+)
G122022 LOC103376870 non-coding upstream 66327 4447095 ~ 4447339 (+)
G122021 NA non-coding upstream 68539 4441617 ~ 4445127 (+)
LOC120570443 NA non-coding upstream 299906 4213388 ~ 4213760 (+)
G121941 NA non-coding upstream 317659 4195664 ~ 4196007 (+)
G122034 NA non-coding downstream 56808 4582819 ~ 4583029 (+)
G122039 NA non-coding downstream 110562 4636573 ~ 4636980 (+)
G122038 NA non-coding downstream 157444 4683455 ~ 4684046 (+)
G122040 NA non-coding downstream 159129 4685140 ~ 4685581 (+)
G122041 NA non-coding downstream 161595 4687606 ~ 4687953 (+)
lrrfip1a lrrfip1,LOC102295012,LOC102195615,LOC100691582,LOC103370951,LOC107396304,LOC107099056 other upstream 160743 4294851 ~ 4352923 (+)
G121917 col6a3 other upstream 403233 4108030 ~ 4110433 (+)
cops8 cops8 other upstream 441552 4061037 ~ 4072114 (+)
ndufv3 NA other upstream 1542334 2962205 ~ 2971332 (+)
pde9a pde9a other upstream 1594917 2868579 ~ 2918749 (+)
G122036 NA other downstream 192274 4718285 ~ 4720843 (+)
zgc:136439 LOC103367146,LOC106581848,LOC101483704 other downstream 290078 4816089 ~ 4818139 (+)
G122128 NA other downstream 368774 4894785 ~ 4895502 (+)
fkbp7 fkbp7,LOC102196462,LOC104949636 other downstream 448778 4974789 ~ 4982979 (+)
LOC120569936 LOC102781033,LOC104920804 other downstream 533990 5060001 ~ 5070248 (+)

Expression


Co-expression Network