LOC120570350


Basic Information

Item Value
gene id LOC120570350
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 28735598 ~ 28737558 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818651.1
ATGGAGACACAGGTCGGAGAGGAGCTCTGCTTTCCACAACTCTTCAACACATCCTGCAGGAAGCTGACGTCTCCTTTGTTTGAAGTGATGCTCATTCACATTTTgctttcctccatctctctgctcactGTAGCTCTCAACCTGCTCGTCATCATCTCAGTCTCCCACTTCAGgcacctccacacacccaccaacatcctcctcctctctctggctgtctcagacTTTCTCGTGGGCCTCCTGCTGATACCCGGAGCAATCCTGCAAAAaacatcctgctggtttcttggtGATTTTTTGTGTTCTCTGTATTCTTATCTAGAACTTATCATTATTTCTTCCTCAGTAGGTGACATGGTGCTCATATCAGTTGACCGTTATGTGGCTATTTGTGACCCTCTGCATTACACCACCAGAATCACCATGGATAGAGTTAAATtatgtgtctatctgtgttGGCTCTGTTGTGTTTCCTACAGCCTTCTCTTTACAAAGGGTTTCCCGACTCAACCAGACAGGTATATTCCGTGTTACGGAGAATGTGTGTTGGTGGTTGGCTATATTGCAGGGATTGTGGACCTTGTTTTGACCTTTATTGTTCCAGTTACTGTCATCGTAGCTCTGTATCTGAGAATATTTGtcgtggctgtgtctcaggctcgtgccatgcgctctcacattacagctgtcacactccagATTTCAGTGACTtcaaaggcaaagaaatcagagctgaaagcagccaggactcTCGGTGTTCTTGTAGTTGTGTTTCTAATTTGTTTCAGCCCATATTACTGCATTTCTCTTGCAGCTGACAACTTGCTCACGGCCTCATATGCATCCTTTATGGTcccaatgttttattttttaaactcttgtctaaaccctgtgatctatgcctttttctacccctggtttagaaaagcagttaaACTCATTGTTACTCTTCAGATATTGCAGCCTGGCTCCTCTgaggccaacatactgtagagaggctgtggagggactgagatcagACTTGGAATGAATATGTTCCTGCTGTTCAGTGagtaaattattaaatttgaattTCAATACAGAAATTGAAAGGCCTGTGCTTCAGCTTTtgctttttgtgtatttttcctctctgatgctgctgcatTTTAGGAGTCATAAGCACCATATactgtttcttttttccccaGGAACCATATTCTTTGTGATAAGAAACATGTTAACCCAAAAGAACAAAAGGGCTACTAAAGCTTTGTATTTATGTTACTATGTTTGACCAAAGCATCTTCTCTGTGATTTGCGTCCACTTTCTTGGACAGGCCTGCTGGGCTCCTGTTccacagagaaaaaagatgcCCCTGAATAGCCACACtttcatgtatttgtatgtttccACTATAGAAAAATATCAACTATTGTGTTTCAAATTAAACTGTCCACACAAAAACATCAtgttctctttcagctaagggacAAAAGCTGCTTTAATCATTTCAGTGCAGTGCCATTCATATTTGATCCCCTGTATATCTTCTCTCTATGACACACATATTGAAAGCAGTATGAAGTCCTTTTGGCAAAAAGTTTAACAACAGCTAATTTGAAAAGATAATATTTTATAGATTATCTATCCTTCAGCGGATAATTGCAGTTACATTTCCAGAGAAACATG

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818651.1 True 1672 mRNA 0.41 2 28735598 28737558

Neighbor

gene id symbol gene type direction distance location
LOC120570124 NA coding upstream 26716 28707542 ~ 28708882 (+)
LOC120570328 NA coding upstream 124114 28609691 ~ 28611484 (+)
LOC120570107 NA coding upstream 237996 28492168 ~ 28497602 (+)
LOC120570105 NA coding upstream 247848 28484923 ~ 28487750 (+)
fer1l6 NA coding upstream 285648 28414638 ~ 28449950 (+)
raph1a LOC103372763,LOC102310239 coding downstream 66686 28804244 ~ 28892620 (+)
LOC120569951 LOC104957843,LOC103367760,LOC105922114,LOC103149907 coding downstream 568268 29305826 ~ 29307000 (+)
LOC120569953 LOC107102032,LOC105922254,LOC104957841,LOC105922255 coding downstream 572796 29310354 ~ 29311230 (+)
LOC120569955 LOC108238847,LOC106534872 coding downstream 578518 29316076 ~ 29316987 (+)
LOC120569959 LOC101464856 coding downstream 608455 29346013 ~ 29346913 (+)
LOC120570261 NA non-coding upstream 22073 28712431 ~ 28713525 (+)
G127701 NA non-coding upstream 201426 28533943 ~ 28534172 (+)
G127665 NA non-coding upstream 349956 28385417 ~ 28385642 (+)
G127623 NA non-coding upstream 391800 28343492 ~ 28343798 (+)
G127613 NA non-coding upstream 507148 28228096 ~ 28228450 (+)
G127747 NA non-coding downstream 155105 28892663 ~ 28895512 (+)
G127762 NA non-coding downstream 178414 28915972 ~ 28916196 (+)
G127784 NA non-coding downstream 200593 28938151 ~ 28938490 (+)
G127806 NA non-coding downstream 247142 28984700 ~ 29044221 (+)
G127805 NA non-coding downstream 341173 29078731 ~ 29084660 (+)
prkag3b prkag3,LOC103374929,LOC105937223,LOC107101406 other upstream 325759 28388643 ~ 28409839 (+)
LOC120569906 NA other upstream 2018201 26713350 ~ 26717397 (+)
zmym2 zmym2 other upstream 2251510 26449443 ~ 26484088 (+)
mphosph8 mphosph8 other upstream 2296313 26411477 ~ 26439285 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other upstream 2605719 26116988 ~ 26129879 (+)
G127814 itgb5 other downstream 291344 29028902 ~ 29041224 (+)
LOC120569952 LOC103367759,LOC104957842,LOC103482036,LOC106947595,LOC102235455,LOC102799479,LOC101465930,LOC102199775 other downstream 558926 29296484 ~ 29299361 (+)
G127932 LOC103367765,LOC102202048,LOC100700231 other downstream 721586 29459144 ~ 29459978 (+)
G127935 LOC103149918,LOC106933234,LOC104960782,LOC104932527,LOC108238793,LOC103482149,LOC105920790 other downstream 729586 29467144 ~ 29474550 (+)
G127938 LOC100695514,LOC102778272,LOC103367768,LOC104960783 other downstream 738554 29476112 ~ 29478950 (+)

Expression


Co-expression Network