si:ch211-184m13.4 (LOC104962230,LOC100690478,LOC103357536,LOC101477149)


Basic Information

Item Value
gene id si:ch211-184m13.4
gene name LOC104962230,LOC100690478,LOC103357536,LOC101477149
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 23139020 ~ 23140683 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818758.1
atgacaGGTGAGATGGCTGTTGAAAATATCACCCTGGACTCAGCCGAAAACTCTCTGAACCAGAGCAGCTGTGATGTATTTATCTACCAAAGAGCTGCCGTAGTCCTCTTCCCAATTTTCTACTCCGTGGTTTTCATTATCAGTGCGAGTGGAAACAGCTTGGTACTCTTTGTGATCTGCCAGAGGAAACAGAAGTTTAACTCCACCTCAATCTATCTGGTCAACCTAGCACTATCTGATACCCTGTTCACACTGGCGCTGCCTGGCAGAATTATTTACTACATCCGTCACTTTGACTGGCCCTTTGGTGACATTCTCTGCAGACTGACAACACTTCTCTTCTTCGCAAATACGTATGCAGGTATTGGCTTCATGACCTGTATCAGTCTGGATCGATACCTGGCCATGGTGCATCCACAAAGGCTGCAGTGGTTGCGGAGTGTGAGGGTGGTTCGCAGGGTCTCCTGCCTGGTCTGGGCTCTGGTATCCCTGGAGGTAGCTCCTCTGATGTTCCGCAGCATGCTGCGTGAGCACCAGGGAAAACAAACCTGTATGGAGTACTTCAACTTTGACGGCTCCCGCTTCACCCCTTATCTCCTGCTTCTGGCCTGTACCATCTCATTCTGCTGTCcgctcatcatcatcatgggcTGCTACGCCAAGATCAACCTGAAGCTGCGAGCTGCAGCCAAGCAGAACTCTGTAACTGGTCGATCGAGGAGGAATCATAGGGCCAACACCATTATTCTTCTCATCCTCCTCACCTTTATCATATGCTTTAGCCCTTACCACCTCAACGTTATGCAGTTTATGTCCAGAAAGATACACCACCAGGCAACCTGCAAGGAACTGAGAGCCTTTAAGGTGTCCTTACAGATCACAGTTTCTCTAATGAACTTCAACTGCTGCTTGGACCCAGTCATCTACTTCTTTGCCATTAAGACCTACAAGAAGCGGGTGTTGAGCCTGTTTAAAGACTACCTCTATACTTCCGGTGCATCCTCCAAAATGACAGCtgagaacagcagcagcaacacctGAGAGAAACCACAGCTGAACTTGCAGGATACATACAACCAGTGTCGCAGAGAAGACCTAGTTCACTCTGTTGAACTCAAAAAGGCCTATTTTAGTCTCTCTGTTCGGATATGACTAACAAGTCTTTTACTTTTTGTGACAATTTTGCATGTATATAT

Function

NR:

description
G-protein coupled receptor 183-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818758.1 True 1196 mRNA 0.47 3 23139020 23140683

Neighbor

gene id symbol gene type direction distance location
gpr183a gpr183 coding downstream 15119 23120451 ~ 23123901 (-)
uchl3 uchl3,LOC102792853 coding downstream 291290 22842106 ~ 22847730 (-)
lmo7a LOC104962234 coding downstream 297882 22792662 ~ 22841138 (-)
acod1 acod1 coding downstream 388566 22747632 ~ 22750454 (-)
cln5 cln5,LOC102794031 coding downstream 395319 22740653 ~ 22743701 (-)
zic5 zic5,LOC102789084 coding upstream 94339 23235022 ~ 23239145 (-)
tmtc4 tmtc4 coding upstream 219795 23360478 ~ 23371431 (-)
nalcn nalcn coding upstream 257840 23398523 ~ 23493338 (-)
fgf14 fgf14 coding upstream 398055 23538738 ~ 23649615 (-)
shox shox,mog-12 coding upstream 676329 23817012 ~ 23825813 (-)
G126353 NA non-coding downstream 368100 22770712 ~ 22770920 (-)
G126341 fbxl3 non-coding downstream 401183 22733568 ~ 22737837 (-)
G126334 mycbp2 non-coding downstream 415429 22723126 ~ 22723591 (-)
LOC120569264 NA non-coding downstream 658705 22478563 ~ 22480315 (-)
G126212 NA non-coding downstream 750851 22387712 ~ 22388169 (-)
G126486 itgbl1 non-coding upstream 370859 23511542 ~ 23518025 (-)
G126489 itgbl1,LOC102787049 non-coding upstream 393012 23533695 ~ 23535597 (-)
G126510 upf3a,LOC102786442 non-coding upstream 542111 23682794 ~ 23690101 (-)
G126526 NA non-coding upstream 558661 23699344 ~ 23700062 (-)
G126528 NA non-coding upstream 562587 23703270 ~ 23704020 (-)
gpr18 gpr18 other downstream 15112 23110033 ~ 23123908 (-)
klf5b LOC104962226,LOC103357491 other downstream 171119 22962199 ~ 22967901 (-)
scel scel other downstream 473548 22655579 ~ 22665472 (-)
katnal1 katnal1,LOC106527129,LOC104958633 other downstream 509905 22615496 ~ 22629115 (-)
si:dkey-100n23.5 LOC103357194,LOC107389748,LOC106527133,LOC108232487,LOC102079199,LOC107091445,LOC103391942,LOC106962244,LOC103134722,LOC104958636 other downstream 556613 22531634 ~ 22582407 (-)
si:ch211-218d20.15 LOC104960513,LOC101470276,LOC102197480,LOC102292608,LOC107099189,LOC100692635 other upstream 814163 23954846 ~ 23957206 (-)
cnga4 cnga4,LOC103356095 other upstream 1530539 24671222 ~ 24679011 (-)
G127032 neb other upstream 2558045 25698728 ~ 25701551 (-)
G127046 neb,LOC100194727 other upstream 2584391 25725074 ~ 25740126 (-)
arhgap20 LOC103357161,LOC102081671,LOC104942835 other upstream 3060479 26201162 ~ 26259576 (-)

Expression


Co-expression Network