LOC120570417


Basic Information

Item Value
gene id LOC120570417
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 8584580 ~ 8585518 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818759.1
ATGATGGATAATGTCTCTATAAGAACATTGTTTGTTCTTTCAGGTTTTAATGAAACAAAGAGCCACCGAGTTGCTGTCTTCTCTCTCACTTTACTGTGCTACTGTTTCATTGTGCTGGTTAATGTTTCTATTATTGTGACCATCATCTTGGATAAAAACTTGCATGAACCTATGTATATTCTATTGTGCACTGTCTGTATAAATTGACTTTATGGAACAACAGGTTTCTACCCCAAGTTTCTCTGGGATCTGCTCTCTCCTGTTCATGTTATCTCTTATTCTGGATGCCTTGTTCAGGCTCTAGTAATGAACTCATATGCCTGCAATGAACTGTCTATTCTTGCAGTCATGGCATATGACAGATATGTGGCTATATGTCGACCCCTGGAGTACCACTCTATAATGTGAAAGCAAAGACTTTTAAAGTTAGTGTGTTTCTCCTGGTTAACACATTTTTGCATTATAGGCACAAATATTATTCTAACATCTAGATTAAAGTTATGCAGCCCCTTTATTGCCAGAGCTTTTTGTATGAACTGGATTATAGTTAAACTTGCTTGTTTCGCAGCTGACACTATTGTTAGCAACATTGCTGCATACAttacaataatcatatatgtatTTCATGGTATTTTTATGGTTTGGTCCTACATGTATATCATCAAAACATGTGTGAATTCTATAGAAAACAGGGCAAAGTTCATGAAAACGTGTGTTCCACATTTAACCTCCTTGCTCACTTTTCTTGTGGCTAtactttttgatttaatgcatATCAGATATGGTTCAAACGATTTGCCTCAACCTCTTCAACTTTCAAACTTTATTGCAATAGAATTTCTCATCATACCTCCTATTATGAATCCGCTCATTTATGGTTTTAAATTGACCAAAATTCGAAACAGAATTCTGGGTTTTGtttatattaacaataaataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818759.1 True 939 mRNA 0.35 1 8584580 8585518

Neighbor

gene id symbol gene type direction distance location
adarb1b adarb1,LOC101485294,LOC102308976,LOC100709054 coding downstream 2004 8442118 ~ 8582576 (-)
asb1 asb1,LOC102790951 coding downstream 187055 8387273 ~ 8397525 (-)
LOC120570227 LOC104955246 coding downstream 240228 8341303 ~ 8344352 (-)
twist2 twist2,LOC103376110 coding downstream 254098 8327026 ~ 8330482 (-)
LOC120569509 lct coding downstream 442098 8130816 ~ 8142482 (-)
ramp1 ramp1,LOC100698743,LOC101467429,LOC102789017 coding upstream 116051 8701569 ~ 8771922 (-)
acmsd acmsd coding upstream 218857 8804375 ~ 8810586 (-)
LOC120569317 NA coding upstream 302345 8887863 ~ 8901784 (-)
pth2ra pth2r coding upstream 448394 9033912 ~ 9122327 (-)
mrasa mras coding upstream 561074 9146592 ~ 9175548 (-)
G122820 NA non-coding downstream 202459 8381886 ~ 8382121 (-)
G122814 NA non-coding downstream 267854 8314022 ~ 8316726 (-)
G122802 NA non-coding downstream 392393 8191924 ~ 8192187 (-)
G122677 NA non-coding downstream 671262 7828932 ~ 7913318 (-)
G122660 NA non-coding downstream 960537 7623422 ~ 7624043 (-)
G122830 NA non-coding upstream 19008 8604526 ~ 8612694 (-)
G122838 NA non-coding upstream 62339 8647857 ~ 8723582 (-)
G122858 map3k19 non-coding upstream 204799 8790317 ~ 8790556 (-)
G122859 map3k19,LOC104941527 non-coding upstream 205146 8790664 ~ 8790898 (-)
G122863 NA non-coding upstream 295925 8881443 ~ 8885620 (-)
traf3ip1 traf3ip1 other downstream 136150 8399585 ~ 8448430 (-)
tmeff2a tmeff2 other downstream 1266948 7181931 ~ 7317632 (-)
pcbp3 pcbp3,LOC100710924,LOC107660579,LOC103138153 other downstream 1713368 6782446 ~ 6871212 (-)
LOC120569614 NA other downstream 1902586 6640881 ~ 6681994 (-)
G122404 NA other downstream 2570385 6012040 ~ 6014195 (-)
ccnt2a ccnt2,ccnt2a,LOC104923135,LOC102200362 other upstream 208103 8793621 ~ 8803104 (-)
G122878 NA other upstream 413944 8999462 ~ 9000123 (-)
stxbp5l stxbp5l other upstream 2354535 10940053 ~ 11094619 (-)
thsd7ba NA other upstream 2695092 11280610 ~ 11467939 (-)
LOC120570668 LOC103354235,LOC105936145,LOC100692075,LOC108240393,LOC104918665 other upstream 3646902 12232420 ~ 12245005 (-)

Expression


Co-expression Network