gjc4b (LOC104925882,LOC103356261,LOC104959787,LOC101482455,LOC102792484)


Basic Information

Item Value
gene id gjc4b
gene name LOC104925882,LOC103356261,LOC104959787,LOC101482455,LOC102792484
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 8121607 ~ 8130460 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818760.1
GGGAATATTCTTTGTCCTCACCCCGCAGTAGGCTACGGCACACAACTGGAGGAAGACGCAGGCTCCCCACAGGAaagaagaagtaaaaaaaaactggatggCTTGATATTATAACGGGAGggctttattttaataaagggAAAACAAGCTCTTGAAATAAGCGACAACTTCGAGGAGCCGTCGGGCGAAAGCAGAGAACCCCAAATCACAACTGAAGGTTTGAGAGCCTCCCTTCTACTGCTGAGGCAAAATGAGCTGGAGTTTCCTCACGCGCCTGTTGGACGAGATTTCCAACCACTCAACCTTCGTGGGCAAAATCTGGCTCACCCTCCTCATCGTCTTTCGCATCGTGCTGACTGCCGTCGGGGGCGAGTCAATCTACTACGATGAACAGAGTAAATTTGTGTGTAACACGCAGCAACCCGGTTGCGAGAACGTGTGCTACGATGCGTTTGCGCCGCTGTCACACATTCGCTTCTGGGTGTTTCAGGTGATCATGATCACCACCCCCACCATCATGTACCTTGGCTTTGCTATGCACAAGATTGCCCGCATGGAGGACGATGACTACCGGCCGCGGGGCCGGAAGAGGATGCCGATAGTGAGCCGCGGTGCCAACCGGGACTACGAGGAAGCGGAGGATAACGGGGAGGAGGACCCCATGATCCTGGAGGAGATTGAGCcggaaaaggaaaaggaagtCGCGGAGAAGCAGCAAAAGCACGACGGGCGCCGCCGCATCAAGCGCGACGGCCTGATGAAGGTCTACGTGTTTCAGCTGCTGTCGCGTGCCATCTTTGAGGCCTCGTTCCTGTTTGGACAGTACGTCCTTTATGGGCTGGAGGTGGTCCCGTCGTACGTATGCACGCGCTCCCCTTGCCCGCACACGGTGGATTGCTTCGTCTCGCGCCCCACAGAGAAAACCATCTTCCTGCTCATTATGTACGCCGTCAGCGCCCTGTGTCTGCTCTTCACCATGTTGGAGATCCTTCACCTCGGCATCAGCGGTATCCGAGACTGCTTTTGCGCACCGCGGCCTCAGCCGCCCACCCCCCGTCACCCGGCTCTGTCCAGCCAGAGGTCCTCCATCTGCCGCCAGCCATCTGCGCCTCCAGGCTACCACACGGCTCTGAAGAAGGACCCGTCGGGGAAAATGGGCTTCAGGGACAACCTGGGAGACTCGGGCCGCGAGTCGTTTGGCGACGAGGCTTCGTCGCGGGAGCTGGAGAGGCTGCGACGACACCTGAAACTGGCTCAGCAGCATCTGGACCTGGCTTACCAAAATGAGGAGAGCAGCCCGTCGCGCAGCAGCAGCCCAGAGTCCAACGGAACCGCGGTTGAGCAGAATAGATTAAACTTTGCCCAGGAGAAGCAGAGCAGTACATGTGAGAAAGGTCTTCGTGCGTAGGTTCTCATAAGACCAGCTGACACAAGACTAAAATTTACATCGGTGACATAAGGgaatccaagtgtgtgtgtttgtgtgtgtgtgacatgacCTTGCTTGAGGTGGATGAAGTCAGCCCAAGCCTTCCTGCATTACGGCCAGTTGTGGTGGGACAAAGAGGAGAGCGGTCGTCTCAACCAGCAATACTTGAGACGCCTGTCTGAAGATCCAAAGTGCTTACAAACTACCGTTGTGCGGCAAGAACGGTTAAGCTTATCATGTACTTCTCCCTCAGGGCAGCTAataactgtaatttttttttttttctttccatgtgtgtgtgtatatatatatttttttattacggGAGAATTTGTCCTCTTTTGGAAGTTCACAGTGAATACATCTCAAGTTTGCCTTAGATCTAAACTCTGTTTTATGGCATTTTGTAAAGGTATGGCCAAGCCAGTTGTAGTGCAAAGAACATGTTTACACCGtagaaaattacttttgtgaGGAAGTGGATCTCAGGAGTGAGATGCAAAACAAAGGTTAATGGACAAGGCACCACTCAAAACGGTACTGGAGTTATTGTCATGCTGATGAAGACATTTTGAGTTAATTTTCATACAAAGGTTTCTCTCAAGTGTGTcactatttgttttgttttttataaatggtTTTTGACAATGTTGGCACTGCACCGGTCAACATTCCCAAGCCTGGTGCTTCGATGGTAACTGGAACACACTTGGGGTGCCTCTGTCCAAAGGAATAAACAAACCTGGGTAATGCTTGAAAAACATAACTTTTGATATTGTCTTGTATCGTTTAAACATGTATTTGATACTGctctttatttttgtattagtgAGTATTGTTGTACTGAAAAGAGGCTACTGTCACTGTGGCAGACATGATTTAATTTTAAAACCACATTCTCGGTCTGCTGTCTTAGTTCCCTGATGCCTGTCCGTGGACGTGCATTCTTTTAGTTCAACTGTTTTCGGTTTCTTTTTTCAGTaagtttcaacaaaaaaaaatcaataacctGCAACTTAGTATTTACACATCGTCTCAGACCAGCAAACATTCCCTTTTTCCGTACAGATCTGGATTTAATTGTATCGTTTGCTAAAATAAGGGAAAATACTGTTTGTGTTCCATgtcgtgatttttttttttgttgggatTATCGATGTTCCAGAATCTCATTGAGGGTTGTAAAACAACATAATCATTTCAATGTAAATTCAATGCCTTGAACGCGCTGTGCGATGCCATCTTTTGTATGCTGAATCATACCCACAGTGCCACATTAGTGCCAACTCAAATATTGTCATCTCAAGTTCTTTTTGGAACAAtgctttttgtactttttatactttttgtaTTGATAGTTATTTGTGgttagtttttaaaataaattttccAACAAAAACA

Function

NR:

description
PREDICTED: gap junction gamma-1 protein

GO:

id name namespace
GO:0007154 cell communication biological_process
GO:0005922 connexin complex cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818760.1 True 2830 mRNA 0.47 4 8121607 8130460

Neighbor

gene id symbol gene type direction distance location
parp9 NA coding upstream 44004 8070678 ~ 8077603 (+)
slc39a10 slc39a10,LOC100706809 coding upstream 195086 7893880 ~ 7926521 (+)
obsl1b LOC102294552,LOC102213482,LOC101473351,LOC103371765,LOC108244293,LOC107092720,LOC106522278,LOC103461888,LOC106964354,LOC106906652 coding upstream 1077556 7005567 ~ 7044051 (+)
calcrla LOC104930425,LOC103374150 coding upstream 1556302 6516857 ~ 6565305 (+)
tfpia NA coding upstream 1606930 6440380 ~ 6514677 (+)
agr1 NA coding downstream 291106 8421566 ~ 8425479 (+)
LOC120569557 NA coding downstream 472474 8602934 ~ 8606947 (+)
LOC120569556 LOC103364994,LOC102198324,LOC103153519,LOC102789605,LOC100690542 coding downstream 477666 8608126 ~ 8624891 (+)
LOC120569558 NA coding downstream 479918 8610378 ~ 8615279 (+)
ube2f ube2f,LOC102789309 coding downstream 501796 8632256 ~ 8680463 (+)
G122723 LOC102208864 non-coding upstream 63651 8057042 ~ 8057956 (+)
G122668 NA non-coding upstream 208276 7828968 ~ 7913331 (+)
LOC120569330 NA non-coding upstream 272893 7843015 ~ 7848714 (+)
LOC120569329 NA non-coding upstream 363321 7706494 ~ 7758286 (+)
G122659 NA non-coding upstream 497539 7623417 ~ 7624068 (+)
G122779 traf3ip1 non-coding downstream 278319 8408779 ~ 8414296 (+)
G122787 LOC103364996,LOC104926113 non-coding downstream 331047 8461507 ~ 8465691 (+)
G122847 NA non-coding downstream 662987 8793447 ~ 8871109 (+)
LOC120570217 NA non-coding downstream 861222 8991682 ~ 8992991 (+)
G122875 NA non-coding downstream 866786 8997246 ~ 8998182 (+)
G122588 NA other upstream 972568 7146625 ~ 7149039 (+)
ybey ybey other upstream 2909705 5209102 ~ 5211902 (+)
G122226 NA other upstream 2955709 5164233 ~ 5165898 (+)
LOC120569936 LOC102781033,LOC104920804 other upstream 3051359 5060001 ~ 5070248 (+)
fkbp7 fkbp7,LOC102196462,LOC104949636 other upstream 3138628 4974789 ~ 4982979 (+)
hdac4 LOC103356262 other downstream 40240 8170700 ~ 8316693 (+)
G122846 NA other downstream 664993 8795453 ~ 8796746 (+)
umps umps other downstream 1790164 9920624 ~ 9928891 (+)
lrp1bb lrp1b,LOC102779748 other downstream 2205531 10335991 ~ 10618696 (+)
LOC120570060 NA other downstream 3121457 11251917 ~ 11260642 (+)

Expression


Co-expression Network