cbsb


Basic Information

Item Value
gene id cbsb
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 20589788 ~ 20611661 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818768.1
ATTTTGCACTTGTATTTCAGCCTtgtcatatttatgtttaatattGTTGTACTTTCTTTACATTTAACGTATTATTGTGAAGCTAACATTGTGGGCCCGTCTAGTTGGTGAAACGTGCTTGAGAGACTGTGAAATGACTGGCGGAATTGCATTTGacttattgtattttatgtgtttatttttcttttagttttcacGGTGTCTTACGATGAAACGtggaaataaatgaacaaaggaCATCTGTATGATGCGTGGCCTTACTCCATTGGACCAGTGTATTTACAGTGAAAACGTAACGCCAGCATGGCCAAGAGTCTAAATGGCCAAGTGCGAGTTCTTCAATGCAGGAGGCAGCGTGAAAGACAGGATCGGCCTGCGGATGGTGGAAGATGCTGAGAAAACCGGGATCCTCAAACCAGGAGACACAATCATTGAGCCCACCTCTGGCAACACAGGTATCGGCCTCGCCCTGGCAGCTGCAGTTAAAGGCTACCGCTGCATTATAACCATGCCTGAGAGGATGAGCAACGAGAAGgttGATGTGTTGAGAGCTCTCGGGGGAGAAATTGTGCGCACGCCTTCTTCTGCAGCTTTTGATTCACCAGAGTCTCACATAGTCACGGCTTGGCGTCTAAAGAGGGAGATCCCCAACTCGCACATCCTCGACCAATATCGTAATGCCAGCAACCCTCTGGCTCACTACGATACCACAGCTGAGGAGATACTGGAGCAGTGTGATGGTAAATTGGACATGTTGGTGGCGGGAGCCGGCACAGGCGGTACACTTACTGGTGTTGCTCGGAAGTTGAAGGAGAGATGCCCCAATGTCAAGaTAGTCGCTGTGGACCCTGAGGGCTCCATTCTGGGTGGCTCTAATGAAAATAAGACTTCCTTTGAAGTGGAGGGCATTGGACATGACTTTATCCCCACAGTGTTGGACagatctCTTGTTGACATGTGGTATAAATCGACTGACCTGGAGACATTCACAATGTCACGCAAGCTGGTCAGAGAGGAGGGTCTCCTGTGCGGCGGCAGCTCTGGCTCAGCCATGGCAGCAGCAGTAAAGATGGCTCGGCAGCTTGAGGCGGGACAGCGCTGTGTGGTCATCCTGGCTGACTCCGTCCGCAACTATATGTCAAAATTCCTGAGTGACAAGTGGATGTGTGAGAAGGGGTTCCTCAGCCCGGAGGagccgatggacttcaaacccTGGTGGTGGAACATGACTGTCCAGTATCTAAACCTATGCCCCCTCACTGTGTTAGCGTCTGTGTCCTGCCAGAAAACCATCGACATCCTGAAAGAGAAAGCATTTGACCAGGCCCCAGTCGTCGATAACTCAGGTGTGATCCAGGGGATGGTCACTCTGGGAACCATCCTGTCCTCTGTGTCGGCAGGGAAGGCCAAACCCTCAGATGCTATCAGCAAGGTGCTCTGCAAGCGTTACAAACAGGTGCACCTGACAGACAACCTGGGGAAGCTGTCCCAAATCCTCGAAACAGACCACTTCGTCCTGGTGGTGCATGATCACGTTCAGaATAAAGCTGATGGGTCAACTTGTCAGAAGCAGATGGTGTTTGGCATCGTGACAGCGATTGACCTCCTCAACTACATCACCACAGATGACAGCCAGGATCACTCGTAGTCTCCGTGATCACTTCCTGTTTAAGACGTGGGCGATACTGCTTGCTTGCGACTGAATCATATTTTAATTCAGTGGTTTTTGcagctacatacagtacaggccaaaagtttggacacaccttctcattcaatgcgtttcctttatt

Function

NR:

description
PREDICTED: cystathionine beta-synthase-like isoform X1

GO: NA

KEGG:

id description
K01697 CBS; cystathionine beta-synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818768.1 True 1793 mRNA 0.49 14 20589788 20611661

Neighbor

gene id symbol gene type direction distance location
ankrd10b ankrd10,LOC102292027 coding downstream 74585 20499453 ~ 20515203 (-)
ube2al ube2al,ube2a,LOC105934920,LOC104955100,LOC103021436,LOC103029486,LOC108259060,LOC107552373 coding downstream 90917 20492166 ~ 20498871 (-)
rab20 rab20 coding downstream 113439 20471607 ~ 20476349 (-)
col4a1 col4a1 coding downstream 200386 20341286 ~ 20389402 (-)
irs2b LOC104955106,LOC103372228 coding downstream 273496 20299081 ~ 20316292 (-)
u2af1 LOC103352857,LOC103391595 coding upstream 18429 20630090 ~ 20636605 (-)
LOC120569729 LOC103352860,LOC100709268 coding upstream 37607 20649268 ~ 20664884 (-)
LOC120569295 grpr,LOC103352898,LOC100697445,LOC101071331,LOC101471274,LOC102795360 coding upstream 103925 20715586 ~ 20719763 (-)
srpx srpx,LOC102777533 coding upstream 163417 20775078 ~ 20792247 (-)
rpgra NA coding upstream 184056 20795717 ~ 20809233 (-)
G125658 NA non-coding downstream 4856 20584648 ~ 20584932 (-)
G125605 NA non-coding downstream 259073 20330508 ~ 20330715 (-)
G125551 NA non-coding downstream 357728 20230085 ~ 20232060 (-)
G125543 NA non-coding downstream 440609 20147416 ~ 20149179 (-)
G125539 NA non-coding downstream 445039 20143583 ~ 20144749 (-)
G125694 NA non-coding upstream 55385 20667046 ~ 20667405 (-)
G125701 NA non-coding upstream 72234 20683895 ~ 20684410 (-)
G125703 NA non-coding upstream 75035 20686696 ~ 20686913 (-)
G125708 NA non-coding upstream 80236 20691897 ~ 20697240 (-)
G125720 NA non-coding upstream 99204 20710865 ~ 20713149 (-)
G125620 col4a2 other downstream 122603 20464109 ~ 20467185 (-)
G125619 col4a2 other downstream 128159 20459162 ~ 20461629 (-)
si:ch211-214p13.7 NA other downstream 666053 19921268 ~ 19923735 (-)
LOC120570223 NA other downstream 793568 19790052 ~ 19796220 (-)
si:ch211-214p13.3 NA other downstream 821202 19751701 ~ 19768586 (-)
LOC120570047 dynlt3 other upstream 122889 20734550 ~ 20738320 (-)
G125842 NA other upstream 342000 20953661 ~ 20960064 (-)
LOC120569741 LOC104951940,LOC103391685,LOC103352881 other upstream 367340 20979001 ~ 20986633 (-)
tmtops2b LOC100693281,LOC102294429,LOC102792754,LOC101463828,LOC102207603,LOC103352886 other upstream 499526 21111187 ~ 21149005 (-)
ecrg4a Augurin-B,LOC103352889 other upstream 581247 21192908 ~ 21198088 (-)

Expression


Co-expression Network