nms (nms)


Basic Information

Item Value
gene id nms
gene name nms
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 25781815 ~ 25788555 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818855.1
GTAGGGGCGTTGGATTTGCGTGTGTTGACGACCGGGGGTCGGTGTGTTTGGTCACCTCTGCCTATAAGAGGATGCCTGTCAGCCCGCAAGACAGAGGGCACGGTGTTCAGACCAAACAGTTGCTGGGGACCGACATTAACGAGGGGAGCCAAACCGAACCTAACCGAGCAGATCGGTGCGCACCACAAGTCACTGCACAATCTCTCCGAAAACGCGCGCAAAttaagagaggaagaggagcgagCAAACACAGTCATGAGTCTGCCAACTATGCGacaactttttcttttatttttattctggtTTCCTGGATCTTGGAGCACAACAGATGCCAGTCCTTTCGATCAGTGGGAAGACGGGATAGAGTTAAGAAAGGTGCGAGGCATCCAGAGTGATGAATTGAGTGATGTTTTATGGGGAGACCAGAATGAGGAGCAAGTCCAGAATGTTTTCAAAAGATTCCTGTTTCATTACTCTAAAGCACGCAACTCTGTCGGAGCTGTACAGCACAAGTCTCACTCAGTTCATCCGTTGATGCGACTTCCCCCCAAGCTTTCCCAGATGAGAAAGAAGAAGGTGTTGCTTTTGAAGATTCGAAGTCTGCCGGAGGGGATGTAGTAGAAgaaaaatctacaaaaaaaaaagagggaaattTAGGCCTAACGGAAAAAGAGAAGCAGGCAGCCTCTTAACATCACACCCTAATGGTGGCTCGACTGGTGGAGCACACACAGCATCTCCGACAGAAACATGACTTTTTGAAGAATTATTGTACAGATGGAAAAAATTGAACTGCACTACCGTGGCTGCCATGTGACTTCCCGCTTCCAAATGTCAATCGGTGTGAATCAATGTGAACTGCCACCAAGCACAAATTTGGCATCTTGCACTGTTACACAAGACATCAATGtcacaaaatacaaacagaacACTCAAAATAATCTCTTAAAGAAGTCCTGTAGTGACACAGATTCCCCCCCAAAAATGAGAATTTAAGAAGAATTGGCACTGATCATTGTGGCAAAGAGGTGGACTCACATTTAATTCAACACATTGAAATGTACATGAACATTTTGTGACAATTATAATGAAAcgtaataaaaaaagttacaatT

Function

symbol description
nms Is expressed in several structures, including diencephalon; heart; liver; muscle; and pleuroperitoneal region. Orthologous to human NMS (neuromedin S).

NR:

description
PREDICTED: neuromedin-S isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818855.1 True 1115 mRNA 0.44 7 25781815 25788555

Neighbor

gene id symbol gene type direction distance location
LOC120570276 tbc1d8 coding downstream 8032 25744895 ~ 25773783 (-)
hacd2 hacd2 coding downstream 173350 25594973 ~ 25608465 (-)
adcy5 adcy5 coding downstream 196143 25504563 ~ 25585672 (-)
sema5ba LOC103367378 coding downstream 371992 25216948 ~ 25409823 (-)
trnas-gcu_4 NA coding downstream 547804 25233930 ~ 25234011 (-)
LOC120569748 LOC102213137,LOC101469272,LOC104967153,LOC100691947,LOC102776592,LOC101156778,LOC103391967,LOC104928670 coding upstream 339095 26127650 ~ 26175193 (-)
cenpj cenpj,LOC104946111 coding upstream 586844 26375399 ~ 26395638 (-)
gja3 gja3,LOC101466613,LOC102798346,LOC102211816 coding upstream 707328 26495883 ~ 26502958 (-)
cryl1 cryl1 coding upstream 721691 26510246 ~ 26535632 (-)
eef1akmt1 eef1akmt1,LOC102796470 coding upstream 776707 26565262 ~ 26570134 (-)
G127027 neb non-coding downstream 87268 25690538 ~ 25694547 (-)
LOC120569982 NA non-coding downstream 321818 25453624 ~ 25459997 (-)
G126926 NA non-coding downstream 516290 25194734 ~ 25265525 (-)
G126924 NA non-coding downstream 597092 25184406 ~ 25184723 (-)
G126868 NA non-coding downstream 693748 25085317 ~ 25088067 (-)
LOC120569833 NA non-coding upstream 10543 25799098 ~ 25805242 (-)
G127109 NA non-coding upstream 32154 25820709 ~ 25823893 (-)
LOC120569246 map4k4,LOC103370377,LOC103391611,LOC100703199 non-coding upstream 136352 25924907 ~ 25948407 (-)
G127180 NA non-coding upstream 318810 26107365 ~ 26107568 (-)
G127205 NA non-coding upstream 503867 26292422 ~ 26292746 (-)
G127046 neb,LOC100194727 other downstream 41689 25725074 ~ 25740126 (-)
G127032 neb other downstream 80264 25698728 ~ 25701551 (-)
cnga4 cnga4,LOC103356095 other downstream 1102804 24671222 ~ 24679011 (-)
si:ch211-218d20.15 LOC104960513,LOC101470276,LOC102197480,LOC102292608,LOC107099189,LOC100692635 other downstream 1824609 23954846 ~ 23957206 (-)
gpr18 gpr18 other downstream 2657907 23110033 ~ 23123908 (-)
arhgap20 LOC103357161,LOC102081671,LOC104942835 other upstream 412607 26201162 ~ 26259576 (-)
gjb8 LOC103391957,LOC104941692,LOC103357168 other upstream 715004 26503559 ~ 26508638 (-)
lats2 lats2 other upstream 850195 26638750 ~ 26668281 (-)
tent5c fam46c,LOC102790440,LOC104944279,LOC103372770 other upstream 1362276 27150831 ~ 27157516 (-)
LOC120570374 NA other upstream 1725765 27514320 ~ 27521960 (-)

Expression


Co-expression Network