rpl24 (rpl24)


Basic Information

Item Value
gene id rpl24
gene name rpl24
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 20861214 ~ 20865558 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819032.1
TATTAACAACACGTCAACTCACTGACAATAAGTTATACTGTTTATTAATTCATAAATATCGAGTTGCAGTCTCCCTATTCCGTTTCCGCATCCGTCATCTTTCTTTCCGGTTTTGTGCCCTCTCGTAGCCATCATGAAGGTCGAGTTGTGCAGTTTCAGCGGGTATAAAATATACCCCGGCCATGGCCGCCGATACGCCAGGATAGACGGAAAGGTGTTCCAGTTTCTGAATGGCAAGTGCGAGTCTGCCTTCCTGGCCAAGAGGAACCCAAGACAGATCAACTGGACTGTGCTGTACAGACGCAAGCACAAGAAGGGCCAGTCTGAAGAGGTGGCAAAGAAGCGTACCCGCCGCGCAGTGAAATTCCAGAGGGCCATCACTGGTGCCTCCCTGGCTGAGATCATGGCCAAGAGGAACCAGAAACCCGAGGTCCGCAAGGCCCAGAGGGAGCAGGCCATCAGagCTGCCAAGGAGGCAAAGAAGGCCAAACAGGCAGCCAAGAAGCCCACTGCTCCAAGTGCAAAGtCGTCTACAAAGGCAGCACCGAGACCCAAGATCGCTAAGACCATGAAGGTCAGCGCACCCCGCGTCGGTGGAAAACGCTAAACCTGACACGTTGTTTAGGGTTGTGAATAAAAGACTTTTGATTAACCATCA

Function

symbol description
rpl24 Predicted to enable mRNA binding activity. Predicted to be a structural constituent of ribosome. Acts upstream of or within chordate embryonic development. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in endodermal cell; intestine; liver; and pancreas. Orthologous to human RPL24 (ribosomal protein L24).

NR:

description
PREDICTED: 60S ribosomal protein L24

GO:

id name namespace
GO:0005840 ribosome cellular_component

KEGG:

id description
K02896 RP-L24e, RPL24; large subunit ribosomal protein L24e

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819032.1 True 658 mRNA 0.52 6 20861214 20865558

Neighbor

gene id symbol gene type direction distance location
dcaf6 NA coding downstream 10222 20824774 ~ 20850992 (-)
rpgra NA coding downstream 51981 20795717 ~ 20809233 (-)
srpx srpx,LOC102777533 coding downstream 68967 20775078 ~ 20792247 (-)
LOC120569295 grpr,LOC103352898,LOC100697445,LOC101071331,LOC101471274,LOC102795360 coding downstream 141451 20715586 ~ 20719763 (-)
LOC120569729 LOC103352860,LOC100709268 coding downstream 196330 20649268 ~ 20664884 (-)
me3 me3,LOC103391678,LOC107389821 coding upstream 20091 20885649 ~ 20899445 (-)
ildr1b NA coding upstream 35416 20900974 ~ 20908154 (-)
ildr2 ildr2 coding upstream 46207 20911765 ~ 20927324 (-)
gpa33b NA coding upstream 61945 20927503 ~ 20933378 (-)
LOC120569994 NA coding upstream 94515 20960073 ~ 20967636 (-)
G125800 NA non-coding downstream 1223 20859599 ~ 20859991 (-)
G125784 NA non-coding downstream 101989 20757707 ~ 20759225 (-)
G125720 NA non-coding downstream 148065 20710865 ~ 20713149 (-)
G125708 NA non-coding downstream 163974 20691897 ~ 20697240 (-)
G125703 NA non-coding downstream 174301 20686696 ~ 20686913 (-)
G125839 NA non-coding upstream 45012 20910570 ~ 20910806 (-)
G125845 NA non-coding upstream 87374 20952932 ~ 20953578 (-)
G125848 NA non-coding upstream 108674 20974232 ~ 20976915 (-)
G125852 NA non-coding upstream 130934 20996492 ~ 20998787 (-)
G125855 tfdp1,LOC102791026 non-coding upstream 135751 21001309 ~ 21004378 (-)
LOC120570047 dynlt3 other downstream 122894 20734550 ~ 20738320 (-)
G125620 col4a2 other downstream 394029 20464109 ~ 20467185 (-)
G125619 col4a2 other downstream 399585 20459162 ~ 20461629 (-)
si:ch211-214p13.7 NA other downstream 937479 19921268 ~ 19923735 (-)
LOC120570223 NA other downstream 1064994 19790052 ~ 19796220 (-)
G125842 NA other upstream 88103 20953661 ~ 20960064 (-)
LOC120569741 LOC104951940,LOC103391685,LOC103352881 other upstream 113443 20979001 ~ 20986633 (-)
tmtops2b LOC100693281,LOC102294429,LOC102792754,LOC101463828,LOC102207603,LOC103352886 other upstream 245629 21111187 ~ 21149005 (-)
ecrg4a Augurin-B,LOC103352889 other upstream 327350 21192908 ~ 21198088 (-)
c12h2orf49 NA other upstream 411364 21276922 ~ 21279859 (-)

Expression


Co-expression Network