LOC120570636 (LOC104963478)


Basic Information

Item Value
gene id LOC120570636
gene name LOC104963478
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 19214753 ~ 19221945 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819108.1
TCATTTAGAATTaaatgacaaagaaagaaacaaagtaaGAATGTACCTGTTCAAAGCAATTAAAGATCCCCTCCAGACAGGTTCTAAGACAGGTCAAAACACTTtgcttaaaataataatttgttgaATATCTTAGATAAATACTAGATTAAAAATACTTCTACattatttaaagcatttttatttgttctcCCTCTTTGAAATGTCCAGAATCTAACATACGAATATTTAGTGTTTCAAAAGTTGAACTGCTAAGACACAAGACACAATGCCTCCTGCTTCACTGAAAAGAGGTTTCAAGTTGCAACATCACACCAAAGTCACAAAAtcatcaaaatcaaactcaGATTTTAAGGTGAGCAAAGAGAAACCTTCCCCCTTCTACTGATGAACGTGAAAACAGCCGTCTGGTGTCAAGCTCTGCACAAACATCATCCACAGGGAAGGTCAAACATCTAAGTAATGTAACAATacgcaaaacacatttttgacttTAAATGTCTGGAAATAAAACCGTGACATCTCTGCAGTGGCAGCAACATCATTGCTGAGGCACATTCAAAAAACAAGTTTAAAACTGCTTTTATCtaacaatttcaatttaaccTTACTTCATGAAAATCAAGCCAAGGACATAAAGTTGAAGAATCACCTAAAAGGGGTTTAAAAAGTGCTGCTGTGTTATCCTAAATCAGACACAATAAGAAGAAATATAAACAGATGATATACTTTATCTTTAAATGTAGGAATTCATTATGACCGATGGTACATAATGCCTTTAGATTGGAGCAGAACTTTATCCATGCAGATTGATTAATTTCCCTTCACTTTACTCATCCTCAACCAACTCCACACTGGCCATCTCCTGCTGGAGAGGATGGGTGTGGCTGTACAGTGTCAAATTACACTCAAATTACAGACCTGCCTAACAGGGCCCACTCTCACTCCCTCTGCACCTTCATTGGTTGAGAACCAACCGCTTTATTTAACCAGCCTGTTTCCTGTAGGCAACTTCTTTGTCAAAGAGGAAATGACATTGCAGCaccaaaacactgaaaacagATGAGTACCAAACCTCTTTTTGACTTCGAGCAACACACAGCTCAGCCTCTGTTACAGAAAACCCATGAGGCAAAACAATCTCGCCATAAAACAGCTTTTGGAACAGAGCGGTGAAGTATGTCTGCTGGAGACAAAGAGACTCCGCGAGACACCACAGGTCAAAGTGgatctgctgtttttttctcgAACCCTCTGATGAGTGATTTGGAATCTGACTGGTCCCCGATTCACGATgctgcctttaatggacaggtcCTTGCTCTGCAGAGACTCATTGCTCAGGGTACATGTGTAAATCTGAACACTCTGAACCAGGTCTCTCCTCTCCATGGAGCATGTTTACAAGGCCACGTGGCTTGCGCCAAGCTTCTGGTGGAAAATGGGGCAAAAGTAAACAGTTCGACGGTGGATGGACAAACGCCCCTGTCAGAAGCTTGCGCCCGGGGCCATGTGACCTGTGTATCGCTGCTCCTTCAACAAGGAGCGACTCCCCTGGGAACCAGCCACACCAGCTCTCCAATTCACAGGGCAGCAGCCAAAGGTCATACAGAGTGCATCGAGTCTCTTGTCCAGCACGGTGCAGATGTGGATCAGTATATTGACCAATCAGGTTTCCCTCTTCACGTCGCCTGCTCCAATCTGCATCTGAGTTCTGTGTGTAAACTGCTTCAACTTGGTGCCAGTGTGAACAGCAGTGTGTCTGGTGACTCGCCGCTGCACATCGCTGCCCGTCTGTCCAGTCCTGAGATGGTGTCAGTCCTGCTTGAGCACGGGGCCGATCGCTCACTCAGGAATTCAGAGGGCAAACAGCCACTGATGCTCGCACCTCCCAACAGCCCGGTGGAGAGGCTGTTGAGACAAGCAGGAGGAGTGTCTCCTCTAATGCAGCTGTGCCGGCTGTACGTCAGGAAAACTCTGAGCAAGCAGAGACTGGGTGAGATCCCCAACCTTCACCTTCCCAAAGAAGTGAAACAGTATCTTCTCTATCAATCAGACCCAGGGGGAGATCTGATGCACAAAATAATGTTCAATTCTGAGCCCTAAACTTCTAGGTCTGTAGGGGGTGCCGTTGCATAATCTTGCAGTCAGAAGACTACATCATAGCTCATGGTCATGGTAGTGATTAACTATATTTCTGCTTTCTGTGACAGACCTCTGTAAACAAACTTTCAGAATTCTCAAGATCAATCTGGACTTTCATGTGAAGACTTTTTATCATTAAGTATtcataaacataaaataaatacacatttaaaatgagaATATGGGCTCATAAGGTCTAATAATTGTTGCATAACTAATGTTAAATAAGGTTTAACAAGCTGAAACAATATTCTTTAGATTACACAAGCCTCCACATTCGGCTAATATTGTAGTTTTTgttatttgaaactaaagtttctgtttttgatgctgctgtattgatttttcctTTAGACTTATAGTAGATTGAATTTACTCTCACGTGAAATCTTGTTCATGTCTGGTACATGCTGTCCCTATAGGGTTTAGTGGTTTTAGTCCTTGCAGGGTAcatggcaacatttttccaacagcaaacatttaaaaaacgaaAGCTAAACACATCAATAGAGATTggattacacaaatatattttttgtactgcaataaataataaaaacaaa

Function

NR:

description
PREDICTED: ankyrin repeat and SOCS box protein 9-like

GO: NA

KEGG:

id description
K10331 ASB9; ankyrin repeat and SOCS box protein 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819108.1 True 2708 mRNA 0.42 7 19214753 19221945

Neighbor

gene id symbol gene type direction distance location
fancb fancb coding downstream 18908 19189183 ~ 19195845 (-)
gpm6bb gpm6b,LOC100694635 coding downstream 56688 19128224 ~ 19158065 (-)
trappc2 trappc2 coding downstream 96166 19116575 ~ 19118587 (-)
LOC120570505 LOC104947492,LOC103352939 coding downstream 181564 19010827 ~ 19033189 (-)
mid1 LOC103352941,LOC100711508,LOC102207649,LOC102290384 coding downstream 210726 18977212 ~ 19004027 (-)
LOC120570610 NA coding upstream 116996 19338941 ~ 19349059 (-)
klhl6 klhl6,LOC102796948 coding upstream 127818 19349763 ~ 19355290 (-)
rpe LOC101467395,LOC103352918,LOC103134215,LOC106919839 coding upstream 243779 19465724 ~ 19468732 (-)
ackr3a ackr3,LOC104934108 coding upstream 269566 19491511 ~ 19498560 (-)
casq2 LOC103352915,LOC101061703,LOC100712579,LOC102192454 coding upstream 329381 19551326 ~ 19556641 (-)
G125227 NA non-coding downstream 8812 19201746 ~ 19205941 (-)
LOC120569517 NA non-coding downstream 100972 19108300 ~ 19113781 (-)
G125178 NA non-coding downstream 123974 19089502 ~ 19090779 (-)
G125173 frmpd4,LOC100710969,LOC102314130 non-coding downstream 137987 19073235 ~ 19076766 (-)
G125116 NA non-coding downstream 367384 18845832 ~ 18847369 (-)
G125293 LOC103392014,LOC104967650 non-coding upstream 210119 19432064 ~ 19432431 (-)
G125294 LOC104967650,LOC103352919 non-coding upstream 213697 19435642 ~ 19436047 (-)
G125295 igsf3,LOC103352919,LOC104967650,LOC105938266 non-coding upstream 217481 19439426 ~ 19439851 (-)
G125299 LOC103352919,LOC102305963 non-coding upstream 232472 19454417 ~ 19459245 (-)
G125311 LOC103352916,LOC105938264 non-coding upstream 325770 19547715 ~ 19550418 (-)
G125090 NA other downstream 510076 18700887 ~ 18704677 (-)
G125089 dct,LOC102781940 other downstream 514951 18695480 ~ 18699802 (-)
prkra prkra other downstream 1051004 18156732 ~ 18163749 (-)
LOC120569287 LOC103391581,LOC104924425,LOC103375901 other downstream 1099656 18113110 ~ 18115097 (-)
fastkd1 fastkd1,LOC102780871 other downstream 2172381 17035373 ~ 17042372 (-)
tbl1x LOC103352926,LOC104925011,LOC102307724 other upstream 10042 19231987 ~ 19258846 (-)
G125326 dopey2 other upstream 373984 19595929 ~ 19597521 (-)
si:ch211-214p13.3 NA other upstream 529756 19751701 ~ 19768586 (-)
LOC120570223 NA other upstream 568107 19790052 ~ 19796220 (-)
si:ch211-214p13.7 NA other upstream 699323 19921268 ~ 19923735 (-)

Expression


Co-expression Network