LOC120570649


Basic Information

Item Value
gene id LOC120570649
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 11262358 ~ 11268852 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819128.1
GTCTAGGTTGAAAGATACAGAAATTCCCTTTTGAAGTCTTAACTTCCAAATGATTTTAGTAAGCTCCAGAGGTCTTCTAAATCAGTTGGAAGTGTATGACGATAAGTTGATAAAAGATACAAGGTTTTTCCACTCTCCTGAACAACATGAAAAGGTTCATGACATGATGGAGTCATCATGaaaacaaccaaatacacattaataacagttttcaaaatgttcacaaaaattataaaatatacaGTGCAAATTATATTAGCTTGCCTGTGGAGTACAATAATTCTGGTGGGTTTGACAGACGATTAAAACgttaaatttttttatgttgaatttATACAAAGCTTCTAAGTGATGGAGGTGTGTAAATTGTAGCACAACATACTGCAGGTTTTACTGTTTGACTTTATGAAATAATATAATCTGATTTCAAATTACCACTGGAATATGTCCATGAATCTGACAGCATCTGCTCTGATGTACAGTTCAAGTATGAACAAGATGTACAGATTCATCTTTCAAGATTTACTCAACAAAAGCTCATGTGAGGACAGCCAGCCAGCCTGTAGGAGTGGAGAGATACTGTAACCTAAGAGTGGGAGAACAATCCACTCTGTCCTTACTCTCCACATATTCAAGGTGTCGGAAACTGTCAGAGGTCTGCAGGATCTATGTTGGCTTGAACCACTGAATCGCCACTTGCTGCTATATTTTCTTTTAGGTTCTGTTgggttggttggataggtgtaATTGTTTGATTTCTTTCCCCCCTccaatttgttttgtacttcttattttaatttttttatatgtcGAGTATGAGAAGAGCTTTCCCTTCAGAACTGTCAGAACTGCTTTAGCTGTTTCCCAGAGTATTGTTggtgagatacacacacagacaaacacattcacactaaGCTGCATGTGTTTGGACTGTGGGAGGACCTCAAAAGGCTCCACCTAGCCAGTGGAATTAAACAGCATTGGAGAATTTTACTTTGTCTggttgttgtattttttattcttttttaaataacacattCAGAAGAGTATGTAGCCTTGGTAAAGTTATGTGGCTTTTTAGTGATTTGTGGTTTGCAggataaaataatgttttacttGTAGTTCAACAAGGCTAACATTTGACTGAAACTGGGATAagaggttgtgtttttttgtgttacattGGTATGCATACTTTTCACCACTATAATACTCCCATGTATGTTACAACAAGAGTTAAGCGACAAACATGTCAGGACAGCCAGCCAGCCTGCGGGAGGGGCGAGTAACTCTGCAACTTAAGAGTGGGAGAACAATCGACTCTCTGTCCTTACTCTCCACATGTTCAAGCATTGCAGGAACCAGTCATGGCTGCAGAAGCAAAGCAGACTTGTTTTGAGGGCAGGACTCTCCAAAACTTTCAGGTCTACCTAGAACAGTCGAGAGACCACGAGGTCAGTCTCTGGTTTGTTCACAACATCCTGCCAGGTGAATTCAAAAGGTGAAATTGATGCCCATATGCTCACTCTACTACAGTCTACATTTCCTGCTGTCCCGATCACTGCTGACATCGTGGAGGGCAGCTCTCAGCTCACAGACAACTTCAAAGCTTTGGTAGCAAAGACCACCAACCTTCAGAAGATCCCATTTGCTTGGTATATCATGCACAGTGAGGACTATGAGAGGCAAGTCAAAGAAAAAGGAGACATGAAGACTTTTGACTTCATACACATGATTCATATGATCTACTATGTGGATAACCTCGCTGACACCATCAAGTTCTACCATAGCCTTCTGAAGAACAATGGCAGTGTTATGATCATCATTGGAGCAGATAACAGTGGCTGGGACGTCCTGTGGAAGACTTACACAAAGGAGCTCTGCGTTGGTGCCATCACAGAGTGGCGCTCATCAGGAGAGGTTATTTCCTGCCTGAAGAGCCAGGGTCTGAAATATGAGGAGCACGTGATTCCCAACACCTTAGACATCACTGAGTGCTTCAATCCAAGCAGCCAGACTGGACAATGTCTGCTGAATTTCTTTACAATCAAAGATAATTTCTACCAGTCATTCACCCCAGAGATCAGAGCAGGCATTTTAGACCTTCTCAGGAACAAGTGCAGCTCTAAAAAAGATAGCAGGGTGTTCTTCAACAATAATGTGTGCTGCATACTTTATATGCTGCCATTTGATCAAAAGTTCAGTATATTTTCCTGTTGCTAAAATGAAGTTCACCATGGGGTGTACTTTTCAGTCTCTTTAAACTATATTCACCTCTGTATGTGTACcaaaatgataaaaacaaaacaatttagtTGCCATTTGGTGATTAAAATCACTAAAATTGACTCTGTGTGCCTTACAAAACATTAGCTTTCGAAAAACAATCATATCCAAAGAGTTTACTGACTGACACACAATTCTAGCTATGTGGTGAGTTTTGAATTGATTTTGTCAACCCAATTGTAGCAGTACAGTAAcaattattaatatttactAATTCATCAATACCAAAATATCTAACGATAATTGAGAACTTAAAAGTATCCCATAAACAAATCAATTGGCATTAAAGGTAAAGGGGAGTAATAGGGTTTAACTTTGACAATCAGGAACAATGAGTGGTATACAAATTAATGGAATTCTTGACCTCGAAGCAGCACCTATCAAAATAAGAATTTGATAGCCATAATTAATTAATCCTAGCCTTGTAATTTCATGGCTACTACTGGAGTTCTACTAGATATTTCATACACACAAACCATGGAACCAAGTTCTTTATAAATGAAGATTTATTGAATTAATAACTACAGATTAAACTAATAAACAAATTGTTGAACAGAGGTTCAGTTGAAAACCACAAAACAGCTAAAACTCTATTACTGCTTTAGAAATGTATTAatccaaaaacagctaaaactcTATTACTGCTTTAGAAATGTATTAatccaaaaacagctaaaactatATTTACTGCTCTGAAATGTAAGAATGGTAAAACTATATTACTGATACTACTATATTCACTGCTTAGAGATATATTGGTGGGGATTGCTTTATGACGGGACATGGTTACACGTGAAATTTCTGCACGTGTTTTCTGACTTGTATCTGCATTAACTTGGGGCACCCTATAAGGTCATAAAAATGGTGAAACAAACCTTGCTGCGCCTGGGGGAGTGAACCTAAGTAAATGTACATATATAGGGGAGCTTCACTGGCAGGAAACAGAGTTGGGGCATTTTGTGCTACAGATGCAGGGATTTCAGTACCTCAGCATTCATAGGAATTTTCTTTCAATCTAGCTTATctgcttttttaattttctgcttcaaataaattaaaaatacctGAGCTCGTGTTGAGCTAGGGCACCAAAAACCTTGTGAatcttttgtgccttttttggaagactttctctcttttttctccacCCCTGTCGAATAGTTGGGGGACAGCTCAgactcctctttaaccgcccgTGGTGAGTTGCAGCCCGGCGGGGACCGATTTTGACAGTCAGACCTCCAGTTATCTCTCAGCGGAGTGCATTTCCAGCGGAGTGGAACCTTCGGTGATCCTGGGAGGAGCGGCCTTAAACTGTAAGTACTTAAGAAAAATCATTTGGTTGTAAAGATGCCCTTGGGTAGTGCTTTTCATACACATGGGGTTAAGAGCCCGTTA

Function

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0046539 histamine N-methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819128.1 True 3684 mRNA 0.39 7 11262358 11268852

Neighbor

gene id symbol gene type direction distance location
LOC120569285 LOC104963990 coding downstream 25599 11228607 ~ 11236759 (-)
spopla spopl,LOC102233870 coding downstream 65421 11184045 ~ 11196937 (-)
LOC120570501 NA coding downstream 115899 11140448 ~ 11146459 (-)
LOC120569949 NA coding downstream 126161 11133981 ~ 11136197 (-)
gtf2e1 gtf2e1 coding downstream 132445 11117587 ~ 11129913 (-)
LOC120570648 hnmt,LOC107099306 coding upstream 1344 11270196 ~ 11276706 (-)
LOC120569666 LOC101066695,LOC103353973,LOC100702988,LOC104967496 coding upstream 312178 11581030 ~ 11587073 (-)
chpfa chpf coding upstream 578637 11847489 ~ 11853239 (-)
LOC120570301 LOC104966043,LOC103353981 coding upstream 659149 11928001 ~ 11931566 (-)
LOC120569817 tsc22d1,LOC104964899,LOC108240410 coding upstream 745921 12014773 ~ 12023501 (-)
G123232 NA non-coding downstream 125287 11136609 ~ 11137071 (-)
G123160 NA non-coding downstream 387278 10822765 ~ 10875080 (-)
G123142 NA non-coding downstream 479850 10709001 ~ 10782508 (-)
G123145 NA non-coding downstream 498442 10757843 ~ 10763916 (-)
G123131 NA non-coding downstream 589680 10672309 ~ 10672678 (-)
G123286 NA non-coding upstream 265272 11534124 ~ 11534342 (-)
LOC120569662 NA non-coding upstream 271975 11540827 ~ 11544518 (-)
G123290 NA non-coding upstream 279651 11548503 ~ 11548704 (-)
LOC120569667 NA non-coding upstream 324329 11593181 ~ 11596706 (-)
G123310 NA non-coding upstream 329094 11597946 ~ 11599502 (-)
stxbp5l stxbp5l other downstream 167739 10940053 ~ 11094619 (-)
G122878 NA other downstream 2262235 8999462 ~ 9000123 (-)
ccnt2a ccnt2,ccnt2a,LOC104923135,LOC102200362 other downstream 2459254 8793621 ~ 8803104 (-)
traf3ip1 traf3ip1 other downstream 2813928 8399585 ~ 8448430 (-)
tmeff2a tmeff2 other downstream 3944726 7181931 ~ 7317632 (-)
thsd7ba NA other upstream 11758 11280610 ~ 11467939 (-)
LOC120570668 LOC103354235,LOC105936145,LOC100692075,LOC108240393,LOC104918665 other upstream 963568 12232420 ~ 12245005 (-)
G123481 LOC106675207,LOC106674584,LOC106676400,LOC106674915,LOC106675345,LOC106676354,LOC106674636 other upstream 1350501 12619353 ~ 12619815 (-)
ikzf2 ikzf2 other upstream 2906962 14175814 ~ 14201729 (-)
G123886 NA other upstream 3515709 14784561 ~ 14794497 (-)

Expression


Co-expression Network