LOC120569286


Basic Information

Item Value
gene id LOC120569286
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 9005329 ~ 9005993 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640855.1
CGTTTCTACAGAAATGGCTGCGTTTGtttgcgtcattAGGTGATTTTACAAAGAGCTGGGACAATGTAGCTGTGTTAGTTGATGAAACACTTATACCACAAGagcTGTGTAGCCCGATCCTACAGACCCCAACACAccagaacataaaacaaaaggtccttctaataaggaataagaacgttggaaacagACAATCCGTTCCTGAACAAAGGATCCGTAAGGGTGATGGCTACTCGATAGCACATAGGGCTGAAATCAACCATGATAAAAGGCCGTGTGCTTCTCTAAACCTCTCTGTGAAAGCTGCTACCCCTAAAAACGTTCACCATCGTAAGCCTAAGAAGCAATTTATTGAGgtgagttgaaaagaaaaacggtaaaa

Function

GO:

id name namespace
GO:0035235 ionotropic glutamate receptor signaling pathway biological_process
GO:0007215 glutamate receptor signaling pathway biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640855.1 True 382 lncRNA 0.42 4 9005329 9005993

Neighbor

gene id symbol gene type direction distance location
LOC120569317 NA coding downstream 103545 8887863 ~ 8901784 (-)
acmsd acmsd coding downstream 194743 8804375 ~ 8810586 (-)
ramp1 ramp1,LOC100698743,LOC101467429,LOC102789017 coding downstream 233407 8701569 ~ 8771922 (-)
LOC120570417 NA coding downstream 419811 8584580 ~ 8585518 (-)
adarb1b adarb1,LOC101485294,LOC102308976,LOC100709054 coding downstream 422753 8442118 ~ 8582576 (-)
pth2ra pth2r coding upstream 27919 9033912 ~ 9122327 (-)
mrasa mras coding upstream 140599 9146592 ~ 9175548 (-)
LOC120569925 LOC103368088,LOC100695821 coding upstream 370536 9376529 ~ 9474839 (-)
pard3bb NA coding upstream 518748 9524741 ~ 9773383 (-)
LOC120569366 LOC104944296 coding upstream 831048 9837041 ~ 9841570 (-)
G122863 NA non-coding downstream 119709 8881443 ~ 8885620 (-)
G122859 map3k19,LOC104941527 non-coding downstream 214431 8790664 ~ 8790898 (-)
G122858 map3k19 non-coding downstream 214773 8790317 ~ 8790556 (-)
G122838 NA non-coding downstream 281747 8647857 ~ 8723582 (-)
G122830 NA non-coding downstream 392635 8604526 ~ 8612694 (-)
G122934 NA non-coding upstream 210817 9216810 ~ 9287702 (-)
G122950 NA non-coding upstream 318407 9324400 ~ 9324800 (-)
G122952 NA non-coding upstream 321768 9327761 ~ 9330473 (-)
G122983 NA non-coding upstream 627511 9633504 ~ 9641776 (-)
G122985 NA non-coding upstream 817191 9823184 ~ 9823594 (-)
G122878 NA other downstream 5206 8999462 ~ 9000123 (-)
ccnt2a ccnt2,ccnt2a,LOC104923135,LOC102200362 other downstream 202225 8793621 ~ 8803104 (-)
traf3ip1 traf3ip1 other downstream 556899 8399585 ~ 8448430 (-)
tmeff2a tmeff2 other downstream 1687697 7181931 ~ 7317632 (-)
pcbp3 pcbp3,LOC100710924,LOC107660579,LOC103138153 other downstream 2134117 6782446 ~ 6871212 (-)
stxbp5l stxbp5l other upstream 1934060 10940053 ~ 11094619 (-)
thsd7ba NA other upstream 2274617 11280610 ~ 11467939 (-)
LOC120570668 LOC103354235,LOC105936145,LOC100692075,LOC108240393,LOC104918665 other upstream 3226427 12232420 ~ 12245005 (-)
G123481 LOC106675207,LOC106674584,LOC106676400,LOC106674915,LOC106675345,LOC106676354,LOC106674636 other upstream 3613360 12619353 ~ 12619815 (-)
ikzf2 ikzf2 other upstream 5169821 14175814 ~ 14201729 (-)

Expression


Co-expression Network