Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120569550 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053123.1 |
| NCBI id | CM020920.1 |
| chromosome length | 39440604 |
| location | 17605145 ~ 17614067 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005640894.1 | True | 852 | lncRNA | 0.48 | 3 | 17605145 | 17614067 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cdca7a | cdca7 | coding | upstream | 72889 | 17527950 ~ 17532256 (+) |
| zak | LOC104965553 | coding | upstream | 78441 | 17501695 ~ 17526704 (+) |
| rapgef4a | rapgef4,LOC101483582 | coding | upstream | 107061 | 17465228 ~ 17498084 (+) |
| pdk1 | pdk1,LOC108240758 | coding | upstream | 174251 | 17424921 ~ 17430894 (+) |
| itga6a | itga6 | coding | upstream | 183791 | 17402757 ~ 17421354 (+) |
| sp9 | sp9 | coding | downstream | 18661 | 17632728 ~ 17634939 (+) |
| scrn3 | scrn3,LOC102796247 | coding | downstream | 29271 | 17643338 ~ 17648252 (+) |
| hoxd12a | hoxd12 | coding | downstream | 253795 | 17867862 ~ 17870159 (+) |
| hoxd11a | hoxd11 | coding | downstream | 259615 | 17873682 ~ 17878153 (+) |
| hoxd9a | hoxd9,LOC100697606,LOC102311238,LOC101477388,LOC102193136,LOC102792463 | coding | downstream | 268399 | 17882466 ~ 17884616 (+) |
| G124671 | NA | non-coding | upstream | 106386 | 17469748 ~ 17498759 (+) |
| G124661 | NA | non-coding | upstream | 167326 | 17437361 ~ 17437819 (+) |
| G124631 | NA | non-coding | upstream | 342319 | 17261737 ~ 17262826 (+) |
| G124627 | tlk1,LOC102777640 | non-coding | upstream | 347643 | 17256842 ~ 17257502 (+) |
| LOC120570569 | NA | non-coding | upstream | 593233 | 17010145 ~ 17011912 (+) |
| G124794 | chrna1 | non-coding | downstream | 50605 | 17664672 ~ 17666075 (+) |
| G124797 | chn1,LOC102233772 | non-coding | downstream | 58188 | 17672255 ~ 17674455 (+) |
| G124804 | NA | non-coding | downstream | 73504 | 17687571 ~ 17687814 (+) |
| G124816 | atp5g3,LOC102234286 | non-coding | downstream | 115989 | 17730056 ~ 17733251 (+) |
| G124819 | NA | non-coding | downstream | 122043 | 17736110 ~ 17736986 (+) |
| myo3b | myo3b | other | upstream | 406555 | 17127881 ~ 17198590 (+) |
| col28a2a | LOC103355072,LOC104961148,LOC102781941 | other | upstream | 581585 | 16988071 ~ 17023560 (+) |
| dap1b | dapl1 | other | upstream | 1503503 | 16099271 ~ 16101642 (+) |
| LOC120570321 | NA | other | upstream | 1627271 | 15970982 ~ 15977874 (+) |
| galnt13 | galnt13,LOC102796746 | other | upstream | 1944131 | 15618514 ~ 15661014 (+) |
| hoxd10a | hoxd10,LOC102792757 | other | downstream | 246093 | 17860160 ~ 17881328 (+) |
| hnrnpa3 | hnrnpa3 | other | downstream | 396690 | 18010757 ~ 18017413 (+) |
| G125079 | NA | other | downstream | 1088961 | 18703028 ~ 18704528 (+) |
| LOC120570507 | NA | other | downstream | 1204686 | 18818753 ~ 18827547 (+) |
| tmsb4x | NA | other | downstream | 1475351 | 19089418 ~ 19090785 (+) |
