LOC120570334


Basic Information

Item Value
gene id LOC120570334
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 10250176 ~ 10321796 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641044.1
tttagtctctgtatTGTCTTTGTCTTGTATCAGTTCCTCATCTTGTCTTGCTTCTTTGTCTTCCCTTCCTGGTTTTCCCTGCGTCGTTCCTtcctggttgtttttttttccccctgtcaTGTCTTCTGGTTATCTTCGTTTGTGCCTGCCTACCTCTGGACACCTTTTGTTCCATGGCAAAGCTCCAGATGGGACCGTAGAGGAGGTTGATAAAGTGGTGAAGTTCAAAGCTCCCACTGAATAAGAGGAGGAAGCAGCAAAGAACAAACGAGCGGCCCATTCTTACTGGCTCACTGGTCCAGGCAGTGTGCCAGACAATGGCCAACCAGGACTTTTCATCGGGTCAGTTTGCTCTGGGAACTCCAGCCTCCAGATCCTGCTAACGCTAATGGACTTCAGAGATGTGAGCTGCCAGGAGGGGGTGTTGCAGTTAGAGCCTGAGGCTGAATCATATTTGGACCTAAGGTGCGATTGTGGTGCCAGCCAGCAGTCCACCTTAGTGACCCCACCCAAGTGGGTGACATCTCATCCAACATCCAACTGTCACCCACTGACCTTAAAGGTTCCTTCTGATGTTTCTTCGTCGTCCCTGTAAGTGGACCAGGCCGAATCAGCACTCCTCCCCTTCATACATCAATGTAATTTGGCACTGGATTGGACTGGACGTCATTATTTTTACTCTCATGACATGGGGATGAGTTGGCCAGTATTCCCTTGTCTTGCTCTCTGGGAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641044.1 True 735 lncRNA 0.49 5 10250176 10321796

Neighbor

gene id symbol gene type direction distance location
LOC120569327 LOC103358003,LOC100710305,LOC102781664,LOC101475894 coding upstream 32526 10211110 ~ 10217650 (+)
LOC120570306 NA coding upstream 146009 10099932 ~ 10104167 (+)
fev fev,LOC102784253 coding upstream 295299 9949090 ~ 9954877 (+)
cryba2b cryba2,LOC106581834,LOC106586156 coding upstream 303475 9943512 ~ 9946701 (+)
fn1a LOC103365935 coding upstream 332550 9884821 ~ 9917626 (+)
rabl3 rabl3,LOC102779363 coding downstream 808261 11130057 ~ 11134144 (+)
nxph2a nxph2,LOC101474521 coding downstream 834794 11156590 ~ 11175940 (+)
LOC120569661 NA coding downstream 1222812 11544608 ~ 11546302 (+)
dars1 dars,LOC102778528 coding downstream 1229119 11550915 ~ 11581353 (+)
pnkd pnkd,LOC100703611,LOC104967495 coding downstream 1265212 11587008 ~ 11595507 (+)
G123074 NA non-coding upstream 65092 10141347 ~ 10185084 (+)
G123078 NA non-coding upstream 97896 10147001 ~ 10152280 (+)
G122980 NA non-coding upstream 536538 9693295 ~ 9713638 (+)
G122979 LOC103367214,LOC104965381 non-coding upstream 570422 9675190 ~ 9679754 (+)
G122975 NA non-coding upstream 582417 9641610 ~ 9667759 (+)
G123118 NA non-coding downstream 307749 10629545 ~ 10629939 (+)
LOC120569520 NA non-coding downstream 334150 10655946 ~ 10658786 (+)
G123132 NA non-coding downstream 354712 10676508 ~ 10676745 (+)
G123133 NA non-coding downstream 370469 10692265 ~ 10692469 (+)
G123148 LOC105912973,LOC105900140,LOC105893694,LOC105893089,LOC105940532 non-coding downstream 479693 10801489 ~ 10801853 (+)
umps umps other upstream 321285 9920624 ~ 9928891 (+)
G122846 NA other upstream 1453430 8795453 ~ 8796746 (+)
hdac4 LOC103356262 other upstream 1933483 8170700 ~ 8316693 (+)
G122588 NA other upstream 3101137 7146625 ~ 7149039 (+)
ybey ybey other upstream 5038274 5209102 ~ 5211902 (+)
lrp1bb lrp1b,LOC102779748 other downstream 14195 10335991 ~ 10618696 (+)
LOC120570060 NA other downstream 930121 11251917 ~ 11260642 (+)
serp2 NA other downstream 1685861 12007657 ~ 12013200 (+)
G123539 sept10,LOC102785043,LOC103375466 other downstream 2727962 13049758 ~ 13279866 (+)
G123633 NA other downstream 3031510 13353306 ~ 13354085 (+)

Expression


Co-expression Network