LOC120570443


Basic Information

Item Value
gene id LOC120570443
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 4213388 ~ 4213760 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641065.1
CTGAGACACACCTGAGAGAGCAGCTGAGGCCAGCCTTTGTTTGGTGTTTAATTTGGACAAACAATTGTAGTGATTTCTTAAGCACATCAGCCAATAAATAAGaTTCCAGTCACCTGCACGTCTCCGGATAGGAAAAATTGAATATTCTAGGCTCGaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641065.1 True 159 lncRNA 0.42 3 4213388 4213760

Neighbor

gene id symbol gene type direction distance location
trim63b trim63,LOC103367607,LOC102793986,LOC102215866 coding upstream 146627 4064863 ~ 4066761 (+)
LOC120570277 dpp10 coding upstream 362493 3609281 ~ 3850895 (+)
mmadhcb mmadhc coding upstream 814545 3393829 ~ 3398843 (+)
nmi NA coding upstream 820181 3382869 ~ 3393207 (+)
itgb2 NA coding upstream 856232 3318800 ~ 3357156 (+)
mlphb NA coding downstream 664 4214424 ~ 4278611 (+)
LOC120570038 NA coding downstream 164655 4378415 ~ 4394022 (+)
LOC120569241 LOC103373060 coding downstream 180298 4394058 ~ 4398874 (+)
maip1 LOC101475169,LOC100711160,LOC102305852,LOC102192410 coding downstream 196104 4409864 ~ 4416440 (+)
pgap1 pgap1 coding downstream 203093 4416853 ~ 4436351 (+)
G121941 NA non-coding upstream 17381 4195664 ~ 4196007 (+)
LOC120570435 NA non-coding upstream 81028 4084213 ~ 4132360 (+)
G121921 NA non-coding upstream 84680 4124919 ~ 4128708 (+)
G121919 col6a3 non-coding upstream 92328 4118108 ~ 4121060 (+)
G121912 NA non-coding upstream 140692 4072462 ~ 4072696 (+)
G122021 NA non-coding downstream 227857 4441617 ~ 4445127 (+)
G122022 LOC103376870 non-coding downstream 233335 4447095 ~ 4447339 (+)
G122024 NA non-coding downstream 234497 4448257 ~ 4448460 (+)
G122034 NA non-coding downstream 369059 4582819 ~ 4583029 (+)
G122039 NA non-coding downstream 422813 4636573 ~ 4636980 (+)
G121917 col6a3 other upstream 102955 4108030 ~ 4110433 (+)
cops8 cops8 other upstream 141274 4061037 ~ 4072114 (+)
ndufv3 NA other upstream 1242056 2962205 ~ 2971332 (+)
pde9a pde9a other upstream 1294639 2868579 ~ 2918749 (+)
LOC120570676 NA other upstream 1372525 2840759 ~ 2840863 (+)
lrrfip1a lrrfip1,LOC102295012,LOC102195615,LOC100691582,LOC103370951,LOC107396304,LOC107099056 other downstream 81091 4294851 ~ 4352923 (+)
G122036 NA other downstream 504525 4718285 ~ 4720843 (+)
zgc:136439 LOC103367146,LOC106581848,LOC101483704 other downstream 602329 4816089 ~ 4818139 (+)
G122128 NA other downstream 681025 4894785 ~ 4895502 (+)
fkbp7 fkbp7,LOC102196462,LOC104949636 other downstream 761029 4974789 ~ 4982979 (+)

Expression


Co-expression Network