G13230



Basic Information


Item Value
gene id G13230
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 733968 ~ 734363 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU17624
ccgagccctgggtatcctgctctgcctttgagaaaatgaaagctcagaaggaccaatcaggaatcttctccttatgaggtcataaggggaaagtaTACTAGTAGTACAGTTagtagtattaggggaccactaaggtctatataaaagagacttcagatacagtattagtggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaaagagacttcagatacagtat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU17624 True 304 lncRNA 0.39 2 733968 734363

Neighbor


gene id symbol gene type direction distance location
plekhg2 plekhg2,LOC103150908 coding downstream 20273 473553 ~ 713695 (-)
LOC120573248 NA coding downstream 158142 570527 ~ 575826 (-)
il15l NA coding downstream 272624 409173 ~ 461344 (-)
chp2 LOC108241578,LOC107097862,LOC105915343 coding downstream 537679 186389 ~ 196289 (-)
dlc NA coding downstream 631613 86153 ~ 102355 (-)
LOC120573127 NA coding upstream 32526 766889 ~ 778667 (-)
LOC120549306 NA coding upstream 52317 786680 ~ 789067 (-)
LOC120570713 NA coding upstream 114307 848670 ~ 1413931 (-)
LOC120571318 NA coding upstream 167984 902347 ~ 952303 (-)
LOC120571420 NA coding upstream 205821 940184 ~ 950453 (-)
G13225 NA non-coding downstream 6139 635246 ~ 727829 (-)
LOC120570540 NA non-coding downstream 14710 718249 ~ 719258 (-)
G13226 NA non-coding downstream 16900 664880 ~ 717068 (-)
trnar-ucu_8 NA non-coding downstream 68542 665333 ~ 665426 (-)
trnar-ucu_7 NA non-coding downstream 80173 653704 ~ 653795 (-)
G13232 NA non-coding upstream 24610 758973 ~ 759718 (-)
G13233 NA non-coding upstream 25716 760079 ~ 760338 (-)
G13235 NA non-coding upstream 31385 765748 ~ 765989 (-)
G13576 NA non-coding upstream 142864 877227 ~ 882012 (-)
LOC120571774 NA non-coding upstream 255488 989851 ~ 991035 (-)
G13195 triap1 other downstream 346584 386401 ~ 387384 (-)
supt5h supt5h other downstream 349780 310607 ~ 384188 (-)
G13128 NA other downstream 408769 309150 ~ 325199 (-)
LOC120544598 timm50,LOC102777204 other downstream 583736 119555 ~ 150232 (-)
cep43 NA other downstream 697144 7487 ~ 36824 (-)
si:ch211-137a8.2 NA other upstream 6089 740452 ~ 750503 (-)
LOC120571545 NA other upstream 235285 969648 ~ 977738 (-)
G13587 NA other upstream 393528 1127891 ~ 1197686 (-)
LOC120571038 NA other upstream 432235 1166598 ~ 1197743 (-)
G13651 NA other upstream 568533 1302896 ~ 1381721 (-)

Expression



Co-expression Network