si:ch211-137a8.2


Basic Information

Item Value
gene id si:ch211-137a8.2
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 740452 ~ 750503 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU17625
CAGCAGGTAGAGGCCACAGGAAGTGAGCCATATGGAGGAGTTTCCGGTTCCTTCGGAGTCTCCTTTGCTTTCCGCTGAGGAGGAAACGCAGCGCTGGGACTGCAGCTGGAGCCAAGATGGAGACCTGCGGGGGTGTGGACTGCTGGAGAGGAAGTGGCTCCTCTGGCAGGACTTCATGACCGAACAGGCCCACCTGGACGCCTGGCTGCGATTGGCTGAGCAGGCTGTCGGTTCCACTGGCCCCGCCCACTTCTCCTACGTCACCGCCAAGGAGGACTTGAGGAAGTTCGAGAGGCTGCGGACCGAGGCCGGCCCTCGCCTGGTCCAGCTGGACGGTCTGACCCGGAGGAATCGAACGCTGACTCGGCTGTTTCGGGGCGCCATGCGGGCTCGGCTGCTGGCGGCGGCGAGGGAGTGCGGGCACCGCTGGGACGAAGTGAACGCCAAACTGGAATCAATCACCGGGCGACTGAAGctgttcGTCTCGGAGTGGGAGGAGCTTgaggcagagagggaggagcTCGCTCTCTGGTTGGCTGACCTGGACGTCCGTCTGACGGAGGTGGATCACCTGACGGGGAACACCTG
>TU17626
CAACAGTCGAAAATCACCtcagagaagacgaaaacagttgttaTTAGTAAGAAGACCCAGGAGATTacacactaagacagcagatgatgaaatgtcTTCACATAGTACGCCGATGTTTAAACtgtcgttcagaaaacaggagttttcagacagcggagCAGGTAGAGGCCACAGGAAGTGAGCCATATGGAGGAGTTTCCGGTTCCTTCGGAGTCTCCTTTGCTTTCCGCTGAGGAGGAAACGCAGCGCTGGGACTGCAGCTGGAGCCAAGATGGAGACCTGCGGGGGTGTGGACTGCTGGAGAGGAAGTGGCTCCTCTGGCAGGACTTCATGACCGAACAGGCCCACCTGGACGCCTGGCTGCGATTGGCTGAGCAGGCTGTCGGTTCCACTGGCCCCGCCCACTTCTCCTACGTCACCGCCAAGGAGGACTTGAGGAAGTTCGAGAGGCTGCGGACCGAGGCCGGCCCTCGCCTGGTCCAGCTGGACGGTCTGACCCGGAGGAATCGAACGCTGACTCGGCTGTTTCGGGGCGCCATGCGGGCTCGGCTGCTGGCGGCGGCGAGGGAGTGCGGGCACCGCTGGGACGAAGTGAACGCCAAACTGGAATCAATCACCGGGCGACTGAAGctgttcGTCTCGGAGTGGGAGGAGCTTgaggcagagagggaggagcTCGCTCTCTGGTTGGCTGACCTGGACGTCCGTCTGACGGAGGTGGATCACCTGACGGGGAACACCTG
>XM_039785560.1
TCGAAAATCACCtcagagaagacgaaaacagttgttaTTAGTAAGAAGACCCAGGAGATTacacactaagacagcagatgatgaaatgtcTTCACATAGTACGCCGATGTTTAAACtgtcgttcagaaaacaggagttttcagacagcggagCAGGTAGAGGCCACAGGAAGTGAGCCATATGGAGGAGTTTCCGGTTCCTTCGGAGTCTCCTTTGCTTTCCGCTGAGGAGGAAACGCAGCGCTGGGACTGCAGCTGGAGCCAAGATGGAGACCTGCGGGGGTGTGGACTGCTGGAGAGGAAGTGGCTCCTCTGGCAGGACTTCATGACCGAACAGGCCCACCTGGACGCCTGGCTGCGATTGGCTGAGCAGGCTGTCGGTTCCACTGGCCCCGCCCACTTCTCCTACGTCACCGCCAAGGAGGACTTGAGGAAGTTCGAGAGGCTGCGGACCGAGGCCGGCCCTCGCCTGGTCCAGCTGGACGGTCTGACCCGGAGGAATCGAACGCTGACTCGGCTGTTTCGGGGCGCCATGCGGGCTCGGCTGCTGGCGGCGGCGAGGGAGTGCGGGCACCGCTGGGACGAAGTGAACGCCAAACTGGAATCAATCACCGGGCGACTGAAGctgttcGTCTCGGAGTGGGAGGAGCTTgaggcagagagggaggagcTCGCTCTCTGGTTGGCTGACCTGGACGTCCGTCTGACGGAGGTGGATCACCTGACGGGGAACACCTGAAGCTG

Function

NR:

description
PREDICTED: uncharacterized protein LOC107714189 isoform X3

GO:

id name namespace
GO:0022402 cell cycle process biological_process
GO:0010948 negative regulation of cell cycle process biological_process
GO:0044770 cell cycle phase transition biological_process
GO:0044772 mitotic cell cycle phase transition biological_process
GO:0007049 cell cycle biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0007093 mitotic cell cycle checkpoint biological_process
GO:0045930 negative regulation of mitotic cell cycle biological_process
GO:0010564 regulation of cell cycle process biological_process
GO:1901987 regulation of cell cycle phase transition biological_process
GO:1901988 negative regulation of cell cycle phase transition biological_process
GO:1901990 regulation of mitotic cell cycle phase transition biological_process
GO:1901991 negative regulation of mitotic cell cycle phase transition biological_process

KEGG:

id description
ko03030 DNA replication
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU17625 False 588 TUCP 0.43 4 740458 747759
TU17626 False 743 TUCP 0.59 5 740458 750503
XM_039785560.1 True 743 mRNA 0.59 5 740452 750497

Neighbor

gene id symbol gene type direction distance location
plekhg2 plekhg2,LOC103150908 coding downstream 26757 473553 ~ 713695 (-)
LOC120573248 NA coding downstream 164626 570527 ~ 575826 (-)
il15l NA coding downstream 279108 409173 ~ 461344 (-)
chp2 LOC108241578,LOC107097862,LOC105915343 coding downstream 544163 186389 ~ 196289 (-)
dlc NA coding downstream 638097 86153 ~ 102355 (-)
LOC120573127 NA coding upstream 16386 766889 ~ 778667 (-)
LOC120549306 NA coding upstream 36177 786680 ~ 789067 (-)
LOC120570713 NA coding upstream 98167 848670 ~ 1413931 (-)
LOC120571318 NA coding upstream 151844 902347 ~ 952303 (-)
LOC120571420 NA coding upstream 189681 940184 ~ 950453 (-)
G13230 NA non-coding downstream 6089 733968 ~ 734363 (-)
G13225 NA non-coding downstream 12623 635246 ~ 727829 (-)
LOC120570540 NA non-coding downstream 21194 718249 ~ 719258 (-)
G13226 NA non-coding downstream 23384 664880 ~ 717068 (-)
trnar-ucu_8 NA non-coding downstream 75026 665333 ~ 665426 (-)
G13232 NA non-coding upstream 8470 758973 ~ 759718 (-)
G13233 NA non-coding upstream 9576 760079 ~ 760338 (-)
G13235 NA non-coding upstream 15245 765748 ~ 765989 (-)
G13576 NA non-coding upstream 126724 877227 ~ 882012 (-)
LOC120571774 NA non-coding upstream 239348 989851 ~ 991035 (-)
G13228 NA other downstream 3910 733268 ~ 736542 (-)
G13195 triap1 other downstream 353068 386401 ~ 387384 (-)
supt5h supt5h other downstream 356264 310607 ~ 384188 (-)
G13128 NA other downstream 415253 309150 ~ 325199 (-)
LOC120544598 timm50,LOC102777204 other downstream 590220 119555 ~ 150232 (-)
LOC120571545 NA other upstream 219145 969648 ~ 977738 (-)
G13587 NA other upstream 377388 1127891 ~ 1197686 (-)
LOC120571038 NA other upstream 416095 1166598 ~ 1197743 (-)
G13651 NA other upstream 552393 1302896 ~ 1381721 (-)
G13995 iws1 other upstream 2230558 2981061 ~ 2984498 (-)

Expression


Co-expression Network