G13232



Basic Information


Item Value
gene id G13232
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 758973 ~ 759718 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU17627
gtgtgtgtttgtgtgtctgtgtacctctgtttgtgtgtgtgcctctgtttatgtgtgtgtgtgtgtgtgtttgtgtgtctgtgtacctctgtttgtgtgtgtgcctctgtttatgtgtgtatgtgtgtgtgtctgtgtgcctctgtgtttgtgtgtttgtgtgtgtgtgtgtgtctgtgtggctctgtgttaatgtgtgtatgtgtgtgtgtgcctctgtatctgtgtgtgtgtgtgtgtgtgtagtgtgtgcgcctctgtgtgtttatgtgtgtgtgtgtgtgttgtgtgtgtctgtgtgtgtttgtttgtctgtgtacctctgtttgtttgtgtgcctctgtttatgtgtgtgtgtgtgtctgtgtggctctgtgtttatgtgtgtatgtgtgtgtgcctctgtatctgtatgtgtgtgtgtgcgcctctgtttgtgtgtgtgtgtgtgtgtgtg
>TU17628
gtgtgtgtttgtgtgtctgtgtacctctgtttgtgtgtgtgcctctgtttatgtgtgtgtgtgtgtgtttgtgtgcctctgtgtgtgtgtgttgtgtgtgtgttgcgtttgTGTGCCTctgtctatgtatgtgtgtatgtgtgtgtgcctctgtatctgtatgtgtgtgtgtgcgcctctgtttgtgtgtgtgtgtgtgtgtgtg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU17627 True 457 lncRNA 0.40 2 758973 759718
TU17628 False 205 lncRNA 0.47 2 758973 759718

Neighbor


gene id symbol gene type direction distance location
plekhg2 plekhg2,LOC103150908 coding downstream 45278 473553 ~ 713695 (-)
LOC120573248 NA coding downstream 183147 570527 ~ 575826 (-)
il15l NA coding downstream 297629 409173 ~ 461344 (-)
chp2 LOC108241578,LOC107097862,LOC105915343 coding downstream 562684 186389 ~ 196289 (-)
dlc NA coding downstream 656618 86153 ~ 102355 (-)
LOC120573127 NA coding upstream 7171 766889 ~ 778667 (-)
LOC120549306 NA coding upstream 26962 786680 ~ 789067 (-)
LOC120570713 NA coding upstream 88952 848670 ~ 1413931 (-)
LOC120571318 NA coding upstream 142629 902347 ~ 952303 (-)
LOC120571420 NA coding upstream 180466 940184 ~ 950453 (-)
G13230 NA non-coding downstream 24610 733968 ~ 734363 (-)
G13225 NA non-coding downstream 31144 635246 ~ 727829 (-)
LOC120570540 NA non-coding downstream 39715 718249 ~ 719258 (-)
G13226 NA non-coding downstream 41905 664880 ~ 717068 (-)
trnar-ucu_8 NA non-coding downstream 93547 665333 ~ 665426 (-)
G13233 NA non-coding upstream 361 760079 ~ 760338 (-)
G13235 NA non-coding upstream 6030 765748 ~ 765989 (-)
G13576 NA non-coding upstream 117509 877227 ~ 882012 (-)
LOC120571774 NA non-coding upstream 230133 989851 ~ 991035 (-)
G13621 NA non-coding upstream 266320 1026038 ~ 1026411 (-)
si:ch211-137a8.2 NA other downstream 8470 740452 ~ 750503 (-)
G13228 NA other downstream 22431 733268 ~ 736542 (-)
G13195 triap1 other downstream 371589 386401 ~ 387384 (-)
supt5h supt5h other downstream 374785 310607 ~ 384188 (-)
G13128 NA other downstream 433774 309150 ~ 325199 (-)
LOC120571545 NA other upstream 209930 969648 ~ 977738 (-)
G13587 NA other upstream 368173 1127891 ~ 1197686 (-)
LOC120571038 NA other upstream 406880 1166598 ~ 1197743 (-)
G13651 NA other upstream 543178 1302896 ~ 1381721 (-)
G13995 iws1 other upstream 2221343 2981061 ~ 2984498 (-)

Expression



Co-expression Network