G13576


Basic Information

Item Value
gene id G13576
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 877227 ~ 882012 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU18066
GACTCTTCAGGGACCTTCTGTATATGGCTGCCTGCAGATCTGCAGAGATGGCTTCTGATGCTACCTGACCTGATGTAACATGCCATGTCCTTGACCTCCATTGTGATGGCTGCTCTCTCGTGCTGTGTCAGTGTCCACCTGTGGACTGCACCTTTGTTCAACGAAAAACCTGAAAAGAACCATGGCAGCATGAACCGGATGCTGGAAAGATGCAGACCCCAGTTTGCCTCTCGTGTGGCCCTCACAAATGATAGCAGATCCTCTACCATTTCAATGTAGGAACTCCAAAACTGGAAAGGCACTTTGGAGGTCAGCAGCAACTTTTAAAGCAGCTTCACGGCAGTCTTGAGAAAGGGTTTCAAGACCCAGCAGCAATAACGTCAGCCTCAATCAGAATGTCTTGTAAGCCAGCATCTCCAAATCGCTTGCCAATACAGGACAGGAAAGCCATACATGTGTGAAACTCCCCCATTCTAATTGTAATCCCAGATCCTCAGCCCTGCTGTGAGATATCTTCTTGACCTGATCTGACTAAACCCTGACACATCTATTCTGCTGAAACAATGAAAATGCTCTTTGTTTTTCACGGTTCA
>TU18068
GACTCTTCAGGGACCTTCTGTATATGGCTGCCTGCAGATCTGCAGAGATGGCTTCTGATGCTACCTGACCTGATGTAACATGGTAAAGatgctctttttccagtgtttgATCAAATGGGTTCATCATGTGATGTATGGTTGACAGAATGCTCTGAACATCTTTTTCATCCTGTTCCTTTCTTTTCTCATCCAATTATGTTCTCTGTCTTGTTGACATGTTCTGCCCAGCCATGTCCTTGACCTCCATTGTGATGGCTGCTCTCTCGTGCTGTGTCAGTGTCCACCTGTGGACTGCACCTTTGTTCAACGAAAAACCTGAAAAGAACCATGGCAGCATGAACCGGATGCTGGAAAGATGCAGACCCCAGTTTGCCTCTCGTGTGGCCCTCACAAATGATAGCAGATCCTCTACCATTTCAATGTAGGAACTCCAAAACTGGAAAGGCACTTTGGAGGTCAGCAGCAACTTTTAAAGCAGCTTCACGGCAGTCTTGAGAAAGGGTTTCAAGACCCAGCAGCAATAACGTCAGCCTCAATCAGAATGTCTTGTAAGCCAGCATCTCCAAATCGCTTGCCAATACAGGACAGGAAAGCCATACATGTGTGAAACTCCCCCATTCTAATTGTAATCCCAGATCCTCAGCCCTGCTGTGAGATATCTTCTTGACCTGATCTGACTAAACCCTGACACATCTATTCTGCTGAAACAATGAAAATGCTCTTTGTTTTTCACGGTTCA
>TU18069
GACTCTTCAGGGACCTTCTGTATATGGCTGCCTGATCTGCAGAGATGGCTTCTGATGCTACCTGACCTGATGTAACATGGTAAAGatgctctttttccagtgtttgATCAAATGGGTTCATCATGTGATGTATGGTTGACAGAATGCTCTGAACATCTTTTTCATCCTGTTCCTTTCTTTTCTCATCCAATTATGTTCTCTGTCTTGTTGACATGTTCTGCCCAGCCATGTCCTTGACCTCCATTGTGATGGCTGCTCTCTCGTGCTGTGTCAGTGTCCACCTGTGGACTGCACCTTTGTTCAACGAAAAACCTGAAAAGAACCATGGCAGCATGAACCGGATGCTGGAAAGATGCAGACCCCAGTTTGCCTCTCGTGTGGCCCTCACAAATGATAGCAGATCCTCTACCATTTCAATGTAGGAACTCCAAAACTGGAAAGGCACTTTGGAGGTCAGCAGCAACTTTTAAAGCAGCTTCACGGCAGTCTTGAGAAAGGGTTTCAAGACCCAGCAGCAATAACGTCAGCCTCAATCAGAATGTCTTGTAAGCCAGCATCTCCAAATCGCTTGCCAATACAGGACAGGAAAGCCATACATGTGTGAAACTCCCCCATTCTAATTGTAATCCCAGATCCTCAGCCCTGCTGTGAGATATCTTCTTGACCTGATCTGACTAAACCCTGACACATCTATTCTGCTGAAACAATGAAAATGCTCTTTGTTTTTCACGGTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18066 False 593 lncRNA 0.37 7 877227 882012
TU18068 True 739 lncRNA 0.47 6 877227 882012
TU18069 False 736 lncRNA 0.71 6 877227 882012

Neighbor

gene id symbol gene type direction distance location
LOC120549306 NA coding downstream 88160 786680 ~ 789067 (-)
LOC120573127 NA coding downstream 98560 766889 ~ 778667 (-)
plekhg2 plekhg2,LOC103150908 coding downstream 163532 473553 ~ 713695 (-)
LOC120573248 NA coding downstream 301401 570527 ~ 575826 (-)
il15l NA coding downstream 415883 409173 ~ 461344 (-)
LOC120571318 NA coding upstream 20335 902347 ~ 952303 (-)
LOC120571420 NA coding upstream 58172 940184 ~ 950453 (-)
LOC120570742 NA coding upstream 131208 1013220 ~ 1353897 (-)
LOC120572169 NA coding upstream 215325 1097337 ~ 1128067 (-)
LOC120544494 NA coding upstream 267774 1149786 ~ 1154041 (-)
G13235 NA non-coding downstream 111238 765748 ~ 765989 (-)
G13233 NA non-coding downstream 116889 760079 ~ 760338 (-)
G13232 NA non-coding downstream 117509 758973 ~ 759718 (-)
G13230 NA non-coding downstream 142864 733968 ~ 734363 (-)
LOC120570540 NA non-coding downstream 157969 718249 ~ 719258 (-)
LOC120571774 NA non-coding upstream 107839 989851 ~ 991035 (-)
G13621 NA non-coding upstream 144026 1026038 ~ 1026411 (-)
G13664 NA non-coding upstream 380022 1262034 ~ 1298976 (-)
G13654 NA non-coding upstream 447687 1329699 ~ 1480649 (-)
G13688 NA non-coding upstream 531297 1413309 ~ 1464806 (-)
si:ch211-137a8.2 NA other downstream 126724 740452 ~ 750503 (-)
G13228 NA other downstream 140685 733268 ~ 736542 (-)
G13195 triap1 other downstream 489843 386401 ~ 387384 (-)
supt5h supt5h other downstream 493039 310607 ~ 384188 (-)
G13128 NA other downstream 552028 309150 ~ 325199 (-)
LOC120571545 NA other upstream 87636 969648 ~ 977738 (-)
G13587 NA other upstream 245879 1127891 ~ 1197686 (-)
LOC120571038 NA other upstream 284586 1166598 ~ 1197743 (-)
G13651 NA other upstream 420884 1302896 ~ 1381721 (-)
G13995 iws1 other upstream 2099049 2981061 ~ 2984498 (-)

Expression


Co-expression Network