LOC120571545


Basic Information

Item Value
gene id LOC120571545
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 969648 ~ 977738 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU18086
AGTtttaaacatagacagtataagaACGGTTTTAAGAAGACAGAGCTCCAGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagaccagcagcagactgggactctgataccagccatgttcagGTGCCCTCAGCAGACGTCAAGCAGGAGACCGGAGAAGGAAAGAAGGACAAGAAGGGCAAGaaggccgaggaggaggagcaacctgcagcagcagaagtgaaggaggaagaggaggagcaacCTGCAGTACCTCCTGCCGCAGCAGCAGtcaaggaggaagaggaggagtatgtggtggagaaggctttggaccgcagagtggtgaagggaagagtagagtttctgctgaaatgga
>XM_039820553.1
TGGCGGCGGGATGGTTGTGTTGTTTATTAGTGAGTtttaaacatagacagtataagaACGGTTTTAAGAAGACAGAGCTCCAGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagaccagcagcagactgggactctgataccagccatgttcagGTGCCCTCAGCAGACGTCAAGCAGGAGACCGGAGAAGGAAAGAAGGACAAGAAGGGCAAGaaggccgaggaggaggagcaacctgcagcagcagaagtgaaggaggaagaggaggagcaacCTGCAGTACCTCCTGCCGCAGCAGCAGtcaaggaggaagaggaggagtatgtggtggagaaggctttggaccgcagagtggtgaagggaagagtagagtttctgctgaaatggaagGGGTTCTCAGAGTATGTATGAGTCTATAATATTAATACTTTGTGTT
>XM_039820562.1
CTCGGGCTGGCGGCGGGATGGTTGTGTTGTTTATTAGTGAGTtttaaacatagacagtataagaACGGTTTTAAGAAGACAGAGCTCCAGGTACACCCGCACACTCAGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagaccagcagcagactgggactctgataccagccatgttcagGTGCCCTCAGCAGACGTCAAGCAGGAGACCGGAGAAGGAAAGAAGGACAAGAAGGGCAAGaaggccgaggaggaggagcaacctgcagcagcagaagtgaaggaggaagaggaggagcaacCTGCAGTACCTCCTGCCGCAGCAGCAGtcaaggaggaagaggaggagtatgtggtggagaaggctttggaccgcagagtggtgaagggaagagtagagtttctgctgaaatggaagGGGTTCTCAGAGTATGTATGAGTCTATAATATTAATACTTTGTGTT
>XM_039820571.1
TTACACGGCTATCAAAGCGAATAGAAGCCAGAGCTGCGCATGCGTTAGCTTCCCATTCTGCTGTTGCTAAGATTCAGAATCCAGAGTGAGTCCAGCAGCCCCAGTGGACATCTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagaccagcagcagactgggactctgataccagccatgttcagGTGCCCTCAGCAGACGTCAAGCAGGAGACCGGAGAAGGAAAGAAGGACAAGAAGGGCAAGaaggccgaggaggaggagcaacctgcagcagcagaagtgaaggaggaagaggaggagcaacCTGCAGTACCTCCTGCCGCAGCAGCAGtcaaggaggaagaggaggagtatgtggtggagaaggctttggaccgcagagtggtgaagggaagagtagagtttctgctgaaatggaagGGGTTCTCAGAGTATGTATGAGTCTATAATATTAATACTTTGTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18086 False 439 TUCP 0.48 3 969696 977699
XM_039820553.1 False 519 mRNA 0.51 3 969648 977731
XM_039820562.1 True 544 mRNA 0.52 3 969648 977738
XM_039820571.1 False 513 mRNA 0.52 3 969648 977606

Neighbor

gene id symbol gene type direction distance location
LOC120571318 NA coding downstream 17345 902347 ~ 952303 (-)
LOC120571420 NA coding downstream 19195 940184 ~ 950453 (-)
LOC120549306 NA coding downstream 180581 786680 ~ 789067 (-)
LOC120573127 NA coding downstream 190981 766889 ~ 778667 (-)
plekhg2 plekhg2,LOC103150908 coding downstream 255953 473553 ~ 713695 (-)
LOC120570742 NA coding upstream 35482 1013220 ~ 1353897 (-)
LOC120572169 NA coding upstream 119599 1097337 ~ 1128067 (-)
LOC120544494 NA coding upstream 172048 1149786 ~ 1154041 (-)
LOC120544505 NA coding upstream 228934 1206672 ~ 1220544 (-)
LOC120544512 NA coding upstream 387893 1365631 ~ 1368320 (-)
G13576 NA non-coding downstream 87636 877227 ~ 882012 (-)
G13235 NA non-coding downstream 203659 765748 ~ 765989 (-)
G13233 NA non-coding downstream 209310 760079 ~ 760338 (-)
G13232 NA non-coding downstream 209930 758973 ~ 759718 (-)
G13230 NA non-coding downstream 235285 733968 ~ 734363 (-)
LOC120571774 NA non-coding upstream 12113 989851 ~ 991035 (-)
G13621 NA non-coding upstream 48300 1026038 ~ 1026411 (-)
G13664 NA non-coding upstream 284296 1262034 ~ 1298976 (-)
G13654 NA non-coding upstream 351961 1329699 ~ 1480649 (-)
G13688 NA non-coding upstream 435571 1413309 ~ 1464806 (-)
si:ch211-137a8.2 NA other downstream 219145 740452 ~ 750503 (-)
G13228 NA other downstream 233106 733268 ~ 736542 (-)
G13195 triap1 other downstream 582264 386401 ~ 387384 (-)
supt5h supt5h other downstream 585460 310607 ~ 384188 (-)
G13128 NA other downstream 644449 309150 ~ 325199 (-)
G13587 NA other upstream 150153 1127891 ~ 1197686 (-)
LOC120571038 NA other upstream 188860 1166598 ~ 1197743 (-)
G13651 NA other upstream 325158 1302896 ~ 1381721 (-)
G13995 iws1 other upstream 2003323 2981061 ~ 2984498 (-)
LOC120570817 NA other upstream 2078991 3056729 ~ 3228824 (-)

Expression


Co-expression Network