G13654


Basic Information

Item Value
gene id G13654
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 1329699 ~ 1480649 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU18161
ACAATTTACAAAAATCCCCATCGCTGTTTACTAAGGTGATGTCAAATTGctgaaatattcagtttattgtcaCTTAAGATGAAAAAAGCTTTAATCAgaacatggctgctgctgctgctgcttaaaaaatgacttgaacAGTTAATGTGTCTAAACTGCGTCTGTGCCGCTGCCATCTTGGGACAGACAACTGATCTTAAAGACTCAGAAAAAGATAGTTGTACTGCttttcagggctccagactaacttttttcactaggagcacagtggcccccaactgaaaattttaggggcacaaccagaagatttaggggcacacaccgtaaatcaacatgctaaccaaatattcacatttctactaatgtccactgtattactaataaatactttgataatggaaattacaatgtgctgtttcaaatttagtttcacattttattgtgcacttttgaagatgcaacataaaaGGTATACTGACAGCACCATTGTTGCcatgacagtacaaatattaaaaaatacactagtctccagtctacaattacaatgaattcaacttaaaattaaaaatgcattttttaggctacttaactaaAATACCAactaaaacccctccctctctcctcccaaacctgccCCTACAACCATgagttgaataattattcagTTCTTACACACTGTAACTTGTAttctttattgttgtatttgtatgttattctttttttattttcatcatgaccgtttttaactgctctttaatgtttcatgtaaattgccttgttgctgaaaggtgctgtagaaatcaaGCTGCCTCGCTTTacagcctcagcctgtcagtcagtcctcagggcagagaaaccaccgttgtgcctgcttgtcaggaagtgtaacgtcaacaacACCATGACCGCTTTCACCTCGCCGTTAATATCACtttgcagcaaacgctgtctgcgtgatgttttgaaaaactgtaaccactttatcggcatttccgtgactaactgtgacttcaacaaaactgcagagtagtttgctccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgggctCCACTCtctctcataaaaaaaaaatggggggcaaatttactggttgcacatgtgcaactggatgtaaaattcagtcacAGTCTGCTTTTGGATGgtcatgtgaaagaaatgctaaactaagcaacatggaataacatttcacggatgaaaaatgtgttttacaataTTATACTATTACTAGTGTTGAATTTAATATTACAAAAGGTAGAATGAATCCTTCTTTTAAGCTAACAGTAAGTTAAGGGACTGTCCTGATACTGAAttgagctaatgctagcttgtgtcaggttatgtattttttatttgagtGATTATTAATATTTCAGTAAGATGCTGAAAACGATGGTTGTTATGTGTGTCACTGAACAGTTCCTTGCGTCATTCCCCATAGACCCCCATGTGGAAAAATCTAGACTTTAAATcagaaataaacatgtttacagcctggtacaaaaaaCAGTTTTGGTCTATGAAGTTAATTTCACACTTCATAACAACTGTTTATATAACTCACCTGTTTAAATTGTATCAAGGCTTAAATCAGCAGACTGTCACTAGCttcaaaatattttgaaaaagtttgGTAAGAAAACctgcatttttaatttgatcaagTGTCCTGTATTATAAATGCATGTATCTATGGTATCCCACAGGCTTCTTCAGTGGATTAGACACATGAGAACAGCTTGTTGTATTCGGGGGAAGTTTGTgagcttttggctaattctgggaTGTTTAACCCATGTataatcatttgttttattattttgatctgtcctcttcttaaataaactgaattgaacTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18161 True 1952 lncRNA 0.50 2 1329699 1480649

Neighbor

gene id symbol gene type direction distance location
LOC120544505 NA coding downstream 109155 1206672 ~ 1220544 (-)
LOC120544494 NA coding downstream 175658 1149786 ~ 1154041 (-)
LOC120572169 NA coding downstream 201632 1097337 ~ 1128067 (-)
LOC120571318 NA coding downstream 377396 902347 ~ 952303 (-)
LOC120571420 NA coding downstream 379246 940184 ~ 950453 (-)
LOC120544616 NA coding upstream 9097 1489746 ~ 1490767 (-)
LOC120544624 NA coding upstream 21598 1502247 ~ 1585995 (-)
LOC120571637 NA coding upstream 52630 1533279 ~ 1581029 (-)
LOC120544633 NA coding upstream 115549 1596198 ~ 1614242 (-)
LOC120570757 NA coding upstream 158856 1639505 ~ 1665468 (-)
G13664 NA non-coding downstream 30723 1262034 ~ 1298976 (-)
G13621 NA non-coding downstream 303288 1026038 ~ 1026411 (-)
LOC120571774 NA non-coding downstream 338664 989851 ~ 991035 (-)
G13576 NA non-coding downstream 447687 877227 ~ 882012 (-)
G13235 NA non-coding downstream 563710 765748 ~ 765989 (-)
LOC120571736 NA non-coding upstream 204333 1684982 ~ 1694684 (-)
G13719 NA non-coding upstream 208135 1688784 ~ 1689032 (-)
G13723 NA non-coding upstream 223839 1704488 ~ 1705012 (-)
G13734 NA non-coding upstream 323657 1804306 ~ 1862706 (-)
G13656 NA non-coding upstream 337413 1818062 ~ 1821409 (-)
LOC120571038 NA other downstream 131956 1166598 ~ 1197743 (-)
G13587 NA other downstream 132013 1127891 ~ 1197686 (-)
LOC120571545 NA other downstream 351961 969648 ~ 977738 (-)
si:ch211-137a8.2 NA other downstream 579196 740452 ~ 750503 (-)
G13228 NA other downstream 593157 733268 ~ 736542 (-)
G13995 iws1 other upstream 1500412 2981061 ~ 2984498 (-)
LOC120570817 NA other upstream 1576080 3056729 ~ 3228824 (-)
G14426 il1rap,LOC106536183,LOC107379882,LOC108229411,LOC106536182 other upstream 1992288 3472937 ~ 3722632 (-)
LOC120544895 LOC102787186 other upstream 2418804 3899453 ~ 4015956 (-)
LOC120571085 mb21d2 other upstream 2548091 4028740 ~ 4055084 (-)

Expression


Co-expression Network