G13870


Basic Information

Item Value
gene id G13870
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 2562310 ~ 2689835 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU18439
cagTATTCATCAAAAGTTTAAGTTGTTATCATTCACATtaattgataaaaaaacaaacattaaatattACATAAATTCTACAAATAAATGGTATTTTACAACTGTCCCCATGTTTTCGGTCAGCCCTGTCACGTTACAtagaaaacaacataaaaagtgTGTAATACGCCTTTAAGGTTATGACTCAGAGGACGTGACATTGTGTGTGGAAatatacacgctaaaattcctgattatttacatggagtctggtggaaatatgctggctctatacacgctaaaagtcctgattattttaaCTACCCAAATTTTAACTACCTTGTCCATAATTTTGTTATTCTGttatttagaaaaacaaaatcagtATTCATTAAAAGTTTAAGTTGTTCACattaactaaaatgctagttaacatcagtaattaaacctaaacagctcatgtaagtcaaaactgcctgcaagcttatcctgtactatatggcaattcctctactatgtgacaaatcgttagcctatttttacaaaaacgtctgctacggagccataacgtgaggtacaaggcaatggagccttttatacattgtcgtgtttctttagaaataaacaacggacaaatagagtctttaaatgcttcaaatgtaaagttattcgctgtcaagtgacgtcaaaatgaatccTAGTCAGTGGTAGTCTGgcgtgtgggaacattttggatttcacgttacctatgatgaaataaaacaatatatagaactttgaaacatgcattcaatatgctaattttagctatgtatcatatgctgaagaaccgaaaaccgtgaccctaaaaccgtgatacaaaccgaaccgtgagttttgtgaaccgtaccacccctagttacATGTCATGAAGTGTTTTTAGTCCAACAGTTCAAATGTTGATAATTGTTTATAGAAACATTTGTTTTCCAAATttgaaatattacaatattattcaaaatataaaaggaCATAATAGTAACCAATaactgttgattattttttacattttgcatatcATGAAGTGTTTTTAGTCCAACAGTTCAAATGTTGATAATCCCAGAGATGAAATCAGatgaatgtttttgtgtttgagtCTCAGATCTGCTTCacagtgcagagtgtgtgtgatggtgaacAGACTGAACTTTGATTTCAGCAGCTGATCTTCAGTCAGTGTTTCTGTCCACAGGAGAGACTCTTAGTcctgcagaggacacagagacacagaggcacCAGCGGACCAGATCCCAAACCCAGGATAAAGAggttgagtgaatgtggtgttgaaggtgtggagttggatcagtgagtcagaggagactgtgtagaaggacagagtgcCAGCAGGAACGTCCACATACACTCCTACTTtgttagagacagaggaggaggagatgaatgTTCTTCTGTTATTGTGCCTGAAATAGTAACCATCATCAGAGCAGTGCAGACTCCAGGAATGATCGTTCCATCCAAACCTACAGTCTTCactgtttcctctccttctgattcctctgtaactcactgctATATTAACCCATCCTCTCCTCTCGActtcccagtaacagcgaccactCAGACCatttctacacagcagctgagccCAGTAGTCAAATctgtctggatgatcaggatatgactGATCCTCTCTCACacgtgtcaccttcctgttgttgtcagacagtttaaGTCCTCTGtgtactgtgtttgtgtccagtccCAG
>TU18442
ccatatcatGAAGTGTTTTTAGTCCAACAGTTCAAATGTTGATAATCCCAGAGATGAAATCAGAtgaatgtatttgtgtttgagTCTCAGATCTGCTTCacagtgcagagtgtgtgtgatggtgaacAGACTGAACTTTGATTTCAGCAGCTGATCTTCAGTCAGTGTTTCTGTCCACAGGAGAGACTCTCAGTcctgcagaggacacagagacactgaggaaccagacCAGACCCCAAACCCAGGATAAAGAggttgagtgaatgtggtgttgaaggtgtggagttggatcagtgagtcagaggagactgtgtagaaggacagagtgcCAGCAGGAACGTCCACATACACTCCTACTTtgttagagacagaggaggaggagatgaatgTTCTTCTGTTATTGTGCCTGAAATAGTAACCATCATCAGAGCAGTGCAGACTCCAGGAATGATCGTTCCATCCAAACCTACAGTCTTCactgtttcctctccttctgattcctctgtaactcactgctATATTAACCCATCCTCTCCTCTCGActtcccagtaacagcgaccactCAGACCatttctacacagcagctgagccCAGTAGTCAAATctgtctggatgatcaggatatgactGATCCTCTCTCACacgtgtcaccttcctgttgttgtcagacagtttaaGTCCTCTGtgtactgtgtttgtgtccagtccCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18439 True 1744 lncRNA 0.37 2 2562310 2634657
TU18442 False 711 lncRNA 0.42 2 2562310 2689835

Neighbor

gene id symbol gene type direction distance location
LOC120544710 LOC103364778,LOC102782303,LOC102212015,LOC101467851,LOC101170765,LOC103393563 coding downstream 473001 2077680 ~ 2089309 (-)
LOC120544691 NA coding downstream 507587 2041770 ~ 2054723 (-)
LOC120544682 NA coding downstream 534361 2024856 ~ 2027949 (-)
LOC120571401 NA coding downstream 543164 1994746 ~ 2019146 (-)
LOC120571206 NA coding downstream 594295 1950033 ~ 1968015 (-)
wdr74 wdr74 coding upstream 280295 2970130 ~ 2972717 (-)
ostn ostn,LOC102776327 coding upstream 311318 3001153 ~ 3010061 (-)
LOC120571282 NA coding upstream 373595 3063430 ~ 3238792 (-)
LOC120571072 NA coding upstream 397629 3087464 ~ 3165911 (-)
LOC120571301 NA coding upstream 402327 3092162 ~ 3094329 (-)
G13856 NA non-coding downstream 45562 2514447 ~ 2516748 (-)
G13840 NA non-coding downstream 87532 2466785 ~ 2474778 (-)
G13828 NA non-coding downstream 122690 2410141 ~ 2439620 (-)
G13817 NA non-coding downstream 123156 2421855 ~ 2439154 (-)
G13832 NA non-coding downstream 136712 2425048 ~ 2425598 (-)
G13889 NA non-coding upstream 11990 2701825 ~ 2729893 (-)
G13890 NA non-coding upstream 12552 2702387 ~ 2748948 (-)
G13892 NA non-coding upstream 21854 2711689 ~ 2715875 (-)
G13896 NA non-coding upstream 40318 2730153 ~ 2733948 (-)
LOC120571726 NA non-coding upstream 70933 2760768 ~ 2761140 (-)
G13651 NA other downstream 1180589 1302896 ~ 1381721 (-)
LOC120571038 NA other downstream 1364567 1166598 ~ 1197743 (-)
G13587 NA other downstream 1364624 1127891 ~ 1197686 (-)
LOC120571545 NA other downstream 1584572 969648 ~ 977738 (-)
si:ch211-137a8.2 NA other downstream 1811807 740452 ~ 750503 (-)
G13995 iws1 other upstream 291226 2981061 ~ 2984498 (-)
LOC120570817 NA other upstream 366894 3056729 ~ 3228824 (-)
G14426 il1rap,LOC106536183,LOC107379882,LOC108229411,LOC106536182 other upstream 783102 3472937 ~ 3722632 (-)
LOC120544895 LOC102787186 other upstream 1209618 3899453 ~ 4015956 (-)
LOC120571085 mb21d2 other upstream 1338905 4028740 ~ 4055084 (-)

Expression


Co-expression Network