G13896


Basic Information

Item Value
gene id G13896
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 2730153 ~ 2733948 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU18474
aattccatatgtgttcattcatagttttgatgccttcagtgagaatctacaatgtaaatagtcatgaaaataaagaaacacattgaatgagaaggtgtgtccaaacttctGCCGATATGTTGACACGGCTAACCAATTAAGATCATAATTTCTCGCTGAATTTCCAACTGATTTTCAAGCAGTTTACTACAAATGCCAGACATGTATTTATAATACAGGATAGTTgattacatttaaaatgcagGTTTTCTTACcaaactttttcaaaatattttgaaGCTAGTGACAGTCTGCTGATTTAAGCCTTGATAAAATTTAAACAGGTGAGTTTCATAAACAGCTGTTATGAAGTGTGAAATTAGCTTCATagaccaaaaccgttttttgtaccaggctgtaaacatttatatatttctgatgtaaagtCTGGATTTTTTCACATGGGGGTCTAAGGGGAATGATACGAGGAACTGTTCAGTGacacacataacaaacagtTTTCAGCATCTTACTGAGATATTAATAATCACtcaaataaaacatacataacctgacacaagctagcattagctcaaTTCAGTATCAGGACAGTCACTTAAGTTACGGTTAGCTTAAAAGAAGGATTAATGTTACTTTTTGTGATATTAAATACAACACTTTAGTAATAGTATAAtattgtaaaacacatttttcatccgtgaaatgttattccatgttgcttagtttagcatttctttcacatgaaCATCCAAAAGCAGTACAACAATCTTTTTCTGAGTCTTTAAGATCAGTTGTctgtccaagatggcggcgccACAGACGCAGTTTAGACACATTAACTgttcaagtcattttttaagcagCAGCCATGTTCTGattaaagatttttttcatcttaagtgacaataaactgaatatttcagCAATTTGACATCACCTTAGTAAACAGCGATGGGGATTTTTGTAAATTGTACTTACAAAGTGATTAATTAAGAACAAATACTTCTTCTCAGTACGGCTTCtttccagtgtgaacacgttgGTGAAATTTAACGCTACCGCTCTGCGAAAAGGTTTTACCACatagatcacagctgtaaggcttctctccagtgtgaatgcgttgatgtgttTTAAGGTTACTActctgagaaaaagttttcccacattgttcacaccagtacggcttctctccagcgTGAACGagctggtgagatttaaggttACTGCTATGAGTAAAAGTTTTACGACatagatcacagctgtacggcttctctccagtgtgaatgcgtttatgtattttaagggtACCACGCTGAGAAAATGTttccccacattgttcacaccagtatggcttctctccagtgtgtaTGCGCTGGTGTTCTTTAAGGTAAGTATGATGAGTAAAacatttcccacattgttcacagcagtacggcttctctccagtgtgaacacgtctGTGGATTCCTAGGGTACTactctgagaaaaggttttaccacacagatcacagctgtaaggcttctctccagtgtgaatgcgttgatgtgtttttaggtGACTCTTTtttgtgaaagctgccccacattgatcacagatgtgtagattctctccagtgtgaactctctgatgaatctttaaatatacagatgttgtgaaggatttgtcacagtgttgacagtggtgacatttgggtccctctcctcctctccgtttctcctcctccttcttcctcttgctccctcGCTCCTCTGAGTCTCCCGAGGCCTCGGTGACAACTTTCCTCTTgcccttcttctcctcctccttctcgttgtgtttctgcatgtactcGGTGATAAGGTCGACATCCAGGTTGTCTTGCGGCTCCCATGTGATATCCTCACTGGAAAGGTgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18474 True 1899 lncRNA 0.39 2 2730153 2733948

Neighbor

gene id symbol gene type direction distance location
LOC120544710 LOC103364778,LOC102782303,LOC102212015,LOC101467851,LOC101170765,LOC103393563 coding downstream 640844 2077680 ~ 2089309 (-)
LOC120544691 NA coding downstream 675430 2041770 ~ 2054723 (-)
LOC120544682 NA coding downstream 702204 2024856 ~ 2027949 (-)
LOC120571401 NA coding downstream 711007 1994746 ~ 2019146 (-)
LOC120571206 NA coding downstream 762138 1950033 ~ 1968015 (-)
wdr74 wdr74 coding upstream 236182 2970130 ~ 2972717 (-)
ostn ostn,LOC102776327 coding upstream 267205 3001153 ~ 3010061 (-)
LOC120571282 NA coding upstream 329482 3063430 ~ 3238792 (-)
LOC120571072 NA coding upstream 353516 3087464 ~ 3165911 (-)
LOC120571301 NA coding upstream 358214 3092162 ~ 3094329 (-)
G13889 NA non-coding downstream 260 2701825 ~ 2729893 (-)
G13892 NA non-coding downstream 14278 2711689 ~ 2715875 (-)
G13870 NA non-coding downstream 40318 2562310 ~ 2689835 (-)
LOC120571745 NA non-coding downstream 71388 2652228 ~ 2658765 (-)
G13855 NA non-coding downstream 152005 2514174 ~ 2578148 (-)
LOC120571726 NA non-coding upstream 26820 2760768 ~ 2761140 (-)
G13966 NA non-coding upstream 140310 2874258 ~ 2874486 (-)
G13967 NA non-coding upstream 142087 2876035 ~ 2877844 (-)
G13968 NA non-coding upstream 145442 2879390 ~ 2879697 (-)
G13969 NA non-coding upstream 148959 2882907 ~ 2884048 (-)
G13651 NA other downstream 1348432 1302896 ~ 1381721 (-)
LOC120571038 NA other downstream 1532410 1166598 ~ 1197743 (-)
G13587 NA other downstream 1532467 1127891 ~ 1197686 (-)
LOC120571545 NA other downstream 1752415 969648 ~ 977738 (-)
si:ch211-137a8.2 NA other downstream 1979650 740452 ~ 750503 (-)
G13995 iws1 other upstream 247113 2981061 ~ 2984498 (-)
LOC120570817 NA other upstream 322781 3056729 ~ 3228824 (-)
G14426 il1rap,LOC106536183,LOC107379882,LOC108229411,LOC106536182 other upstream 738989 3472937 ~ 3722632 (-)
LOC120544895 LOC102787186 other upstream 1165505 3899453 ~ 4015956 (-)
LOC120571085 mb21d2 other upstream 1294792 4028740 ~ 4055084 (-)

Expression


Co-expression Network