LOC120544739


Basic Information

Item Value
gene id LOC120544739
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 2977851 ~ 2996315 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU18541
gtcCATTAAAGAGTGGATCAGTCCTCTTCCAGACAAATCGCTGCCGGCGCTCAGAATCCGAGAGGAGCTGCTCAGGATCCTGCAGGAACTGCCCAGTGTGAGCCAGGAGACTCTGAAGCACAGTGGCATCGGACGCTCCGTCATGTTCCTCTACAAACATCCCAAAGAGTCTCGATCCAACAAAGACCTCGCTCTCAAACTTATCAATGAGTGGTCGCGGCCGATATTCGGCTTGACGTCCAACTACAAGGGGATGACGAGAGAGGAGCGCCAGCAGAGAGATCTGGACCAGCAGATGCCTCAGAAACAACGACTCAGttcGGGTGGTCAGACGCCCCGGAGAGACCTGGAGAAACAGCTGACCGGGGAGGAAAAAGCTCTGCGACCCGGAGACCCCGGGTTCTGCGCCAGGGCCCGGGTGCCGATGCCCTCCAACAAAGACTACGTCGTGCGACCCAAATGGAACGTAGAGATGGAGTCCAACAGGCACGGCCAGGTGAAGAAGGGAATGTCCCGCGTTGATAAACAGATGCGTCGAATCGCCGACATCCGGCGCCTGACGAAGCCGGGACACGCTGTTAAAATCAGCGTCGAGGGCAACCGGATGCCCCTCTGATTTTAACCTCCATAGGATTtattcactttattttttttttcccttatttttaatgtgttgttttcctgaacaaaccccctcccctcccccatctTCAGGTCCAGCTCTGCCTTACTGAAGCCTGAGGTCAGAATGTGAACATCTGCTGTAAACTCATCTGGTCTTTGGGCTAAACAACTCAAAATATTACTCCAAAATGATCTGCAGAATAAAAGAGAACTGGCTGCAAACATCAGTAGTAGTTGGGTTAATTTGATCTCAGAATATTAGCTCATGCTGCATTCAGGTACTCCCATGATGGTCCCATTATCCCGAGTTAGGAAGTCCTCCTTCCAACTTGTTGGTGTTGAAGATTAAGTCGTAACGTGGAGAAAAAACATGAACGCTACAAAGatgatgtgttgtgttttattgctcAGAGTTTAAGTTTaactctcctgttgtcctcgggtcacatttgacccattttcaaaaagtttgtgTATCAGAAatctgggtttctttcaaccaaattgtcaaaataaataacgtggatggttccatacaacggtCATCACAACTACAACAAATAATCAattcactactttcattaaatatgaggttttcattcaattttatagcatttgaagtaGAATTGATAAAGAACctcggattttaaattttgacccagaaaaacaaaaagttacaagacaacacaagggttaaacaataGCTAGTTTCCAATTTGAAGCTTTATAGTTATTTTCTCCCTAAAGCCACTCGCATATCACTTCACTTGACGTATTAAGTTAATGCTAATAAATAACTTCTCTAACTAATCTAGCTCACTCTACGTAGACGGCTAACTGTTACAACCGGTTACCATTTTACAAATTACACGagcaaaaaaatgtatgtgcaaTTTGTAAACTTAAGTATCTTTCCATTAACTATGGCACCAACTCAGCTAGCAAAAAAGACGCCAACTTTTGGAGTTGTTCCGATATGAGGGGACAATTGCAGGCTTTGTCCCAGTCGGGAACTCATTCTTCTAATAAATTTGACACCACGTGAATGTAGCGTTTATGTTAGCAATGAGCTCCATTTTGCATCATCGCCAAACCAACTGGATCCACAAAGTTAGCTCATGTTAGCGTTACATTAGCTTTACCTCAAGTAAAGTAACGTTAGCGATCGGTTTCATCTCCAAGCCCATAATTGTAGTGGTCACTGGATCCACAATGTTCACTAATGTCAGCACAATGTTAGCTTTACCTCCTAAGTTAAGTAACCatagaagctaatgttagcagtgAGTGGACTTGGAGGTACAACCAACTCtaaggctaatgttagctttacATCTAAGCCAACtaagctagctaatgttagcagtcAGCTACATTAGCTGTATCTCAAAACAAGCCAAATCTTTCGCATTACCTTATACTATCAGTTAGCTATGTTAGTCATCCAAAACTGTCAAGATCCATAACATTTAGCTTACGTTAGCAGTCATTAGCGCTAGCTCTAAAGCAAGCCTGGTCCATAATGTCGGCTAATGTTAGCTCTAAACTAATTTTAGCAGTCAGTTACACGTTCAGCATTATGGACTTAAAGATGAAGCTAAGTTCATAACTTTTGTGGTTAGTAATTGTCTCTAAACCAATTATGTAGCTTAAGTTTGCTACATTAGCTTTAGCTCCAAACAAACTGGATCCCTAATGATGACTTGCAGAAAGCTAACACGGTTCATAATATTAGTAGTTATCTTAACATCCAGGACAACGAAGATAGCTAATGGCAGCAGTCCGCTGTGTTAGCTAGATCTCAAAACaagtaaaatgtacaacttGAGCTTAAATTATCAGTTGGCTACATTTTGTAAGTTTCACATTATGTTAGCGTTAGCACTTTTTTTGCCTAACCTACGGgcagagaatgtctaataaggggagagcttccactctcgggaaaattccgggttagggtacaatggggcttaatagggagtgagatagggagtgaacaggctctccatagacaggctctgcTACGGGTTTCTAAGTTAGCAATCAGCTACATTAGCTTTATCTCTTAAAGTGTAAGCGTGTGTTGCATCAGAGAGAAATCTAACGTGGCTGATCAAAGAATCATTTTGGTgacattttgagtttttttgtccAAAGTACcatcatgtatttttattttttttcttgattagagAATAAAATCGTCCCTCAGGCTCTTTTTTTGTTCTCCTGAATATGAAGGTGTTTGTGTTCTGCTAATCCACTGGCCTCCTCAGTCCCATTTTTGTCCCGTCTCTGTTCCCGTAGCGGCTGTACAGAAGTGTGTAAACTGTCGGCAGGACGGCGTTCACACAGGTAACGCGCGGCGACCCCGACCAGATGTCGGGGTCGGGGGTGTTGACTGTGTGAACCGGCCTTCTTTCTGCACTGTGTTCTGGATCAGGTTTACTTTTCTTAATAAAGACTCGA
>XM_039778710.1
CTTCCTGCAGACGATGGCGGCGGCACCCCCGTTCAGGATGAGCACCCGGCGTCAGACGGAGAGGAGGACGCCAGGAGCGACGCGGGACGTCAGTCGGAGGACGAGGGCAGCAACGGGCGATTCGCCCGGCGGGGCCGACAGCGACTTCGGAGAGCAGGCCCCcggcgccgccgccgccgctccGCGAGCGACAAAAGCGATTCGGAGGCGGAGGCCCCCCGGCGCGCCGACAGCGACGCCGAGTCCGACTCCTCTCCAGTCAAACGCAGGGTGAGCGCCTCCGAAGACGACGGGGGGTCGCCGCCCGCCAAACGCCGAGAGTCGGACGACGAGGACcaggcggcggcggcggcggcggagTCGCCCGCCGCCAAACGCAGGGGGAGCGGCTCggacatggaggaggaggaggaggagaaaccTAGAGCGGCCGTAGACAGCGACTCGGAGAACGAGGACGCCAAGCCGGCGCCGGCGTCCCCCGGCCGCCGGTCCGACCGCGCCGACAGTGACTCTGAGACGGAGACGCCCGGCAGACGCAAGGCGGCGCCGATAGACTCAGACGGCGAGGAGGAGGCGGAGAAACGGCCGGAGGAggcagaggggggaggaggaggaggaggaggaggggggaagtGGAAGGCTGTGATGCAGTCGGACAGCGaggacgaggaagaggaggccgGGAGGAGGAAGAAGGCTGCGGCGGGAAGCGATGCAGAGCAACCGGAAGAGGCGGGGAAGCAGAAGGTCGACAGCGAGGACGAAGACGAGAAGCCAGGTAGGGACCTCGGCgtaGGACCCAGATGTGGGCGTAGAGTAACCCAGCTGTCCTCTCGTTTGTCCCCCGGAGCAGCCAAGAGGAGCCGGGCGGTGTCGGACGACGGGAACTCGGACAGCGACGACACGGCGGGCTCGCTCGCCCCCGACAAGAGCATGGCGGCCAAGCTGAGAGAGCTGGGCTCGGACAGCGGCAGCGAGGACGACGAGCGCGCCAAGGCCGCCGGCGGCGGCCAGAAGGACGAGAAGGCGCTGTTCGGCAGCGACAGCGAATCGGGCGAaggcgaggaggaggaGAAAATGATCGCCGACATCTTTGGGGAGTCCGGAgacgaagaggaagaggagttcaCGGGTTTCAACCAGGAGGATCTAGAGGGGGACAAGAAGGAGGCGAAGGAGgagcaggagcagcaggagcagtCGGACTCGGACGAAGGGGTCGACCGCAGCGGCCAAGAtaccaGCTTCATGTCCGACTTTGACATCATGCTCGCTAAGAGGAAAGCCATGAACAGCAGGAAACGGCGGCACCGCGACGGAGGGACGTTCATCAGCGACGCCGACGACGTGGTCAGCGCCATGATCAGCAAGATGAACGAAGCCGCGGAGGAGGATCGAACTCTCAACAGTCAGAAGAAACCAGCGCTGAAAAAGCTCACGCTGCTGCCACAGGTCGTCATGCACCTGAAGAagtaagaagtgtgtgttttgtggggaaaaaaagggggggggtcCATTAAAGAGTGGATCAGTCCTCTTCCAGACAAATCGCTGCCGGCGCTCAGAATCCGAGAGGAGCTGCTCAGGATCCTGCAGGAACTGCCCAGTGTGAGCCAGGAGACTCTGAAGCACAGTGGCATCGGACGCTCCGTCATGTTCCTCTACAAACATCCCAAAGAGTCTCGATCCAACAAAGACCTCGCTCTCAAACTTATCAATGAGTGGTCGCGGCCGATATTCGGCTTGACGTCCAACTACAAGGGGATGACGAGAGAGGAGCGCCAGCAGAGAGATCTGGACCAGCAGATGCCTCAGAAACAACGACTCAGttcGGGTGGTCAGACGCCCCGGAGAGACCTGGAGAAACAGCTGACCGGGGAGGAAAAAGCTCTGCGACCCGGAGACCCCGGGTTCTGCGCCAGGGCCCGGGTGCCGATGCCCTCCAACAAAGACTACGTCGTGCGACCCAAATGGAACGTAGAGATGGAGTCCAACAGGAGCGGCTATAAGAAAGGCATCAGCATGGTGGAGAAGCACAAGCGGCGCTTTGCCGAGCAGAGGAAACTGAGCCGCCTGCAGGGAGCTGTCAAGATCAGCATAGAGGGAAACCGGATGCCCCTGCACGGCCAGGTGAAGAAGGGAATGTCCCGCGTTGATAAACAGATGCGTCGAATCGCCGACATCCGGCGCCTGACGAAGCCGGGACACGCTGTTAAAATCAGCGTCGAGGGCAACCGGATGCCCCTCTGATTTTAACCTCCATAGGATTtattcactttattttttttttcccttatttttaatgtgttgttttcctgaacaaaccccctcccctcccccatctTCAGGTCCAGCTCTGCCTTACTGAAGCCTGAGGTCAGAATGTGAACATCTGCTGTAAACTCATCTGGTCTTTGGGCTAAACAACTCAAAATATTACTCCAAAATGATCTGCAGAATAAAAGAGAACTGGCTGCAAACATCAGTAGTAGTTGGGTTAATTTGATCTCAGAATATTAGCTCATGCTGCATTCAGGTACTCCCATGATGGTCCCATTATCCCGAGTTAGGAAGTCCTCCTTCCAACTTGTTGGTGTTGAAGATTAAGTCGTAACGTGGAGAAAAAACATGAACGCTACAAAGatgatgtgttgtgttttattgctcAGAGTTTAAGTTTaactctcctgttgtcctcgggtcacatttgacccattttcaaaaagtttgtgTATCAGAAatctgggtttctttcaaccaaattgtcaaaataaataacgtggatggttccatacaacggtCATCACAACTACAACAAATAATCAattcactactttcattaaatatgaggttttcattcaattttatagcatttgaagtaGAATTGATAAAGAACctcggaaaaaagtgacaaatgtcaaaAAGCGCGGACAAAAATCGACCaggacattggaaaaagtgacgaCAACGTTGAAACAAGTGATTAAAAACACCAGGAAAAGCGACAAGTgtcttacattttaattttaaattttgacccagaaaaacaaaaagttacaagacaacacaagggttaaacaataGCTAGTTTCCAATTTGAAGCTTTATAGTTATTTTCTCCCTAAAGCCACTCGCATATCACTTCACTTGACGTATTAAGTTAATGCTAATAAATAACTTCTCTAACTAATCTAGCTCACTCTACGTAGACGGCTAACTGTTACAACCGGTTACCATTTTACAAATTACACGagcaaaaaaatgtatgtgcaaTTTGTAAACTTAAGTATCTTTCCATTAACTATGGCACCAACTCAGCTAGCAAAAAAGACGCCAACTTTTGGAGTTGTTCCGATATGAGGGGACAATTGCAGGCTTTGTCCCAGTCGGGAACTCATTCTTCTAATAAATTTGACACCACGTGAATGTAGCGTTTATGTTAGCAATGAGCTCCATTTTGCATCATCGCCAAACCAACTGGATCCACAAAGTTAGCTCATGTTAGCGTTACATTAGCTTTACCTCAAGTAAAGTAACGTTAGCGATCGGTTTCATCTCCAAGCCCATAATTGTAGTGGTCACTGGATCCACAATGTTCACTAATGTCAGCACAATGTTAGCTTTACCTCCTAAGTTAAGTAACCatagaagctaatgttagcagtgAGTGGACTTGGAGGTACAACCAACTCtaaggctaatgttagctttacATCTAAGCCAACtaagctagctaatgttagcagtcAGCTACATTAGCTGTATCTCAAAACAAGCCAAATCTTTCGCATTACCTTATACTATCAGTTAGCTATGTTAGTCATCCAAAACTGTCAAGATCCATAACATTTAGCTTACGTTAGCAGTCATTAGCGCTAGCTCTAAAGCAAGCCTGGTCCATAATGTCGGCTAATGTTAGCTCTAAACTAATTTTAGCAGTCAGTTACACGTTCAGCATTATGGACTTAAAGATGAAGCTAAGTTCATAACTTTTGTGGTTAGTAATTGTCTCTAAACCAATTATGTAGCTTAAGTTTGCTACATTAGCTTTAGCTCCAAACAAACTGGATCCCTAATGATGACTTGCAGAAAGCTAACACGGTTCATAATATTAGTAGTTATCTTAACATCCAGGACAACGAAGATAGCTAATGGCAGCAGTCCGCTGTGTTAGCTAGATCTCAAAACaagtaaaatgtacaacttGAGCTTAAATTATCAGTTGGCTACATTTTGTAAGTTTCACATTATGTTAGCGTTAGCACTTTTTTTGCCTAACCTACGGgcagagaatgtctaataaggggagagcttccactctcgggaaaattccgggttagggtacaatggggcttaatagggagtgagatagggagtgaacaggctctccatagacaggctctgcTACGGGTTTCTAAGTTAGCAATCAGCTACATTAGCTTTATCTCTTAAAGTGTAAGCGTGTGTTGCATCAGAGAGAAATCTAACGTGGCTGATCAAAGAATCATTTTGGTgacattttgagtttttttgtccAAAGTACcatcatgtatttttattttttttcttgattagagAATAAAATCGTCCCTCAGGCTCTTTTTTTGTTCTCCTGAATATGAAGGTGTTTGTGTTCTGCTAATCCACTGGCCTCCTCAGTCCCATTTTTGTCCCGTCTCTGTTCCCGTAGCGGCTGTACAGAAGTGTGTAAACTGTCGGCAGGACGGCGTTCACACAGGTAACGCGCGGCGACCCCGACCAGATGTCGGGGTCGGGGGTGTTGACTGTGTGAACCGGCCTTCTTTCTGCACTGTGTTCTGGATCAGGTTTACTTTTCTTAATAAAGACTCGACAGAAACTCA

Function

GO: NA

KEGG:

id description
K17498 SPN1, IWS1; transcription factor SPN1

RNA

RNA id representative length rna type GC content exon number start site end site
TU18541 False 3096 TUCP 0.37 7 2985927 2996305
XM_039778710.1 True 4865 mRNA 0.50 16 2977851 2996315

Neighbor

gene id symbol gene type direction distance location
LOC120571294 NA coding upstream 37128 2934777 ~ 2940723 (+)
LOC120570793 NA coding upstream 43146 2889025 ~ 2934705 (+)
LOC120570832 NA coding upstream 105449 2853218 ~ 2872402 (+)
LOC120544728 NA coding upstream 160290 2805911 ~ 2817561 (+)
LOC120544717 NA coding upstream 178524 2797986 ~ 2799327 (+)
gmnc NA coding downstream 38494 3034809 ~ 3044150 (+)
LOC120554600 NA coding downstream 276664 3272979 ~ 3273169 (+)
LOC120554633 NA coding downstream 278162 3274477 ~ 3274667 (+)
LOC120554604 NA coding downstream 279665 3275980 ~ 3276171 (+)
LOC120554596 NA coding downstream 281165 3277480 ~ 3277670 (+)
G13931 NA non-coding upstream 91471 2886085 ~ 2886380 (+)
G13930 NA non-coding upstream 93909 2882815 ~ 2883942 (+)
G13929 NA non-coding upstream 97999 2879393 ~ 2879852 (+)
G13921 NA non-coding upstream 130795 2846803 ~ 2847056 (+)
G13920 NA non-coding upstream 131486 2844055 ~ 2846365 (+)
G14017 NA non-coding downstream 136289 3132604 ~ 3166172 (+)
G14016 NA non-coding downstream 162415 3158730 ~ 3608475 (+)
G14019 NA non-coding downstream 167955 3164270 ~ 3164611 (+)
LOC120571786 NA non-coding downstream 199197 3195512 ~ 3196352 (+)
LOC120571720 NA non-coding downstream 547154 3543469 ~ 3548600 (+)
zgc:162872 LOC103361195,LOC100694875,LOC101467947,LOC102198539,LOC102776046 other upstream 13079 2948634 ~ 2964772 (+)
LOC120571130 NA other upstream 185006 2610872 ~ 2792845 (+)
G13555 NA other upstream 239663 2726319 ~ 2738188 (+)
LOC120571187 NA other upstream 682963 2263410 ~ 2294888 (+)
G13390 NA other upstream 1418188 1551864 ~ 1559663 (+)
G14148 NA other downstream 1022929 4019244 ~ 4055085 (+)
LOC120571647 LOC103360213,LOC102310147 other downstream 1241256 4237571 ~ 4852575 (+)
LOC120570718 LOC103473932 other downstream 1367351 4363666 ~ 4449830 (+)
G14246 NA other downstream 1371288 4367603 ~ 4420822 (+)
G14209 LOC102792843 other downstream 1503858 4500173 ~ 4527377 (+)

Expression


Co-expression Network