LOC120570718 (LOC103473932)


Basic Information

Item Value
gene id LOC120570718
gene name LOC103473932
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 4363666 ~ 4449830 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU18913
GGACCCATCAGAGACAAGAACCTTGCTACcggaacctgaacctgaacctgaacctgaacctgaacctgaacccagctgtgggTCCATGAAGAGTCACCGGTCCATGGAGCCACCACTACTTTAAGAAAAGACCTGTAAGGGAGAGGAGAATAGAAATAGAGGAGATCCTACTTgaaatggaggagagaggatTGATGGAGAGACTTGAATGGCAGAAGGAGCGAATTGCAATGAAAAgtgaaattaaaatgttaagAAGAAGATTGAGGACCCATCAAAGACCAGAGtctcctgaacctgaacctgaacccagctgtgtgtcctttaaGAGTGACCGGTCACATGGTCGCTTTATTTCCTTTAAAAGTCAACAACCTTTTGCTGACAGAGGAAGAAAGGTGTATCTCTGTAGGGAGCCCCTCCGTAATGCCGTCAGACACCCAGAACAACAATCTGAGTCGGTCAGCGACAAAAACAGAACACTCAGTGGACGCAAACCGACAGTGAACAAATGAGCCTGCTAGAGTCAGATGGTTGACACCAGGTCCATTGAGatgtaagtgtgtttttaatttcattaatcaaactgtgacatcactcatcaagaaaaaaaaaaaaaaaaaaaaaaaaaacgtaaatacagtaagatcatacttcacgtagggggtaatggtcgtaaatcggagatcactaaattgaatgttgagtcactttgtgcatacgcaaagacaatgtcggactcagtagttttctctggacccctgccaaacctgaccaatgatgaaatgtacagctgtacgtcatccttccaccgctggttgtcggggtggtgcccagctaatgatgtgggctatgtgaataactggggggcattctggggaaagcctggtctgatggagagagacggcattcatcccacctgggacggagccgctctcattACAAAAAATTTGAccgagtttatcagacataaaccatgacaacccaagtttgatattagtaatcagaggtgcagtgctacgcgcccctctgtgcttccgttggagcagtcgcccactcatagtctaataaccacggtgtctgttccccgactcagatcggttaaatcaaaggtaaacaaaagatacgctatacttaacaacctaattggaattaaaacgactgcaacgatagaacaaaataagaaaattagatgtggactattaaatattagatctctgtcttctaaagcattattggtaaacgagttgatatcagataataacattgacttattttgtcttactgaaacctggctgggccatgaagactatgttagtctaaatgaagccacatctcccagtcatattaatactcaaattcctagaggctcaggccgaggagggggagttgcagccatctttgatgcaagcctgttaattactcctaaacctaaattaaattatagctcctttgaaagtcttgttcttaatcttcgaCATCcgaaatggaaaacattacagccaattatattagTTGTTATTTACACAGGGCTCCAGGGTCgttattctgaatttttatctgaattctctgagtttttATAAT
>TU18953
GTTTCCTCTTGTTTCCTCCTTAAAGTTTATTTCCACTTTACAGAGTTTCTGACGCAGCTTTTTCTCTCCGTGTGAAGCTCCAGTTGAAGgacccatcagagaccagaccctgctgaacctgaacctgaacccagctgtgtgtccatgaagagcCACCGGTCCATGGAGCCACCACTACTTTAAGAAAAGACCTGTAAGGGAGAGGAGAACAGAAATGGAGTACAGGCTACTTGAAATGGAGAAGAGAGGATTGATGGAGAGACTTGAATGGCAGAAGGAGAGAATTGCGATGGAAAGGGAAATTGAAATGTTAAGAAGAAGATTGAGGTGAGTTGTGAACATCCAGCAAACTGGAACGAGTCTCATTGGATG
>XM_039819208.1
GTTTGATTTCCTGTTCATCACTGCTGGTTGTTATAAAGTGTTACTGCTCCTCTGATCTCTGTTGTCACAGTGTTTCTGGTTCTACAggattctttctgtctcctcctcctcctcctcctcctcctcctcctgatgAAGCTGAAACAGGTTTGTTGTTTTGCTGTCAGAGACAAAGGTTTCAGTCGACACACACGATAAGATGTCTCGGTGTCCCAGAGGTCTTCCAGGTGGAGCTGCAGCGTGAGAAACCCTCCAATCAGAGCAGTCCAGTGTGGCTGTGACTCATCAGGAAACAACTCACCTGAGTTCTTCTCCGTCAACTCTTTGGACTGTTTGaagaaactgacccatcagagaccagaccctgctgaacctgaacctgaacccagctgtgtgtccatgaagagcCACCGGTCCATGGAGCCACCACTACTTTAAGAAAAGACCTGTAAGGGAGAGGAGAACAGAAATGGAGTACAGGCTACTTGAAATGGAGAAGAGAGGATTGATGGAGAGACTTGAATGGCAGAAGGAGAGAATTGCGATGGAAAGGGAAATTGAAATGTTAAGAAGAAGATTGAGGACCCAGAAGAGACAAGAGtctcctgaacctgaacctgagcctgaacccagctgtgtatCCTTTAAGAGCGACTGGTCACATGAACGCTATATTAACTTTAAAGGAGAGCAACCCTCTGCTGAAAGGAGGATCCATCAAAGACCAGACtctgctgaacctgaacccagctgtgtgtccttcaagAGTGACCGGTCACAAAAACGCTTTATTGACTTTAAAGGAAAGCAACCCACTGCTGAAAAGAGagaggACCAGGAGAGCTCAGAGGTTCCCAGTGGTCAGTCTGTCCAGCAGCATCAAATACACCTGGACTCCATATGTATgctgctggaggagaacaTTGTCAGTTTTGTGAAGAACAAGCTGAAGAAGATCCATAAAGTTCTGAAtccagattacccagaatgcgtagagagtcagagggaggatgaagatgaggatgaagagcagaggagcagcagagaggcacTTATGAAGATCACAAtgcacttcctgaggagaatgaagcaggagGAGCTGGCTGAGCGTCTGCAGAGCAGAAGTTCTGCTGGAGTTTGTAAGCATAAACTCAAGACTAACCTAAACaagaagttccagtgtgtgtttgaggggattgctaaagcaggaaacccaacccttctgaatcagatgttcacagagatctacatcatgGAGGGAGGGACTACAGAGGTCAatgatgaacatgaggtcaggcagattgaaacagcatccagaAAATCAGACAGACCTGAAACAAAAGTCAAAcgagaagacatctttaaagccccacctggaagagatgaaccaatcagaacagtgatgaccAAGGGAGTGTCTGGCattgggaaaacagtcttaacacagaagttcactctggagtgggctgaaggcaaagccaaccaggacatccagttcataTTTCCAATCactttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgttgatCACTTCTtcagtgaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgacggtctcGATGAGTGTCGATttcctctggacttccacaacactgagatcctgactgatgttacagagtccacctcagtgggtgtgctgctcacaaacctcatcagggggaaactgcttccctctgctcgcctctggataaccacacgacctgctgcagccaatcagatccctgctgagtgtgttgacatggtgacagaggtcagagggttcactgaccaacaaaaggaggagtacttcagtaAGCGATGCAGAGACAAGAAGCAGGAaaacagaatcatctcccacatcaagacatcacgaagcctccacatcatgtgccacatcccagtattctgctggatcactgctacagttctggatgacgtgttgaagaccagagagggaggagagctgcctaaaaccctgactgagatgtacatccacttcctggtggttcagtccaaagtgaAGAACATCAAGTATGATAGAACATCTGAGACGGACCATCACTGGAGTCCAGAGAGCAAGAAGATGATCAAGTCTCTtggaaaactggcttttgagcagctgcagaaaggcaacctgatctttTATGAATCAGACCTGATGGAGTGTGGCATCAATATCacagcagcctcagtgtactcaggagtgttcacacagatctttaaagaggagagaggactgtaccaggacaatGTGTTCTCCTTCGTCCAtttgagtgttcaggagtttctggcagctcttcatgtccatctgacatttATCAACTCTGGACTCAACCTGCTGTCAGAAGAACAAACAACATCGTTGAGGTTTAAAGTGTTCTGGGACAAATCAACACGtttctaccagagtgctgtggacaaggccttgcagagtccaaatggacacctggacttgttcctccgcttcctcctgggtctttcactgcagaccaatcagaatctcCTACGAGGCCTGATGACACAGACAGGGAGTAGCTCAGAGACCAATCAGAAAGCAGTCAAGTACATCAAGATGAAGATTAGTGAGGATCTATGTacagagagaagcatcaatctgttccactgtctgaatgaactgaatgatggtTCTCTAGTGGAGGAGATCCAACTGTTCCTGAGATCAGGAAGCCTCTTCAcagataaactgtctcctgctcagtggtcagctctggtattcattttattgtcatcagaaaaagatctggacgtgtttgacctgaagaaatactctgcatcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctACTGAGTGgatgtaacctgtcagagaaaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacgacctgcaggattcaggagggaaactcatctctgatggactgaagagtccacactgcatactggacactctcagactgagtgtctgtaacctgtcagcgagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaatgaCCTGCAGGAatcaggagggaagctgatatctgatggactgaagagtccacactgcacactggagactctcagactgagtggctgtaacctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacgacctgcaggattcaggagggaagctgatgtctgttggactgaagagtccacactgcacactggagactctcagactgagtggctgtaacctgtcagagagaagctgtgaagatctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaaaaatgacctgcaggattcaggagggaagctgatatctgttggactgaagagtccacactgcacactggagatTCTTAGactgagtggctgtaacctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctccagtctgagagagctggacctgagtaacaatgacctgcaggattcaggagggaagctgatcgctgatggactgaagagtccacactgcacactggagactctccGtctgtcaggctgtctgatctcagaggaaggcagttcttctctggtctcagctctgagctccaacccctcccatttGAGAGAGCTGGAgctgagctacaatcatccaggagactcaggagtgaagctactGTCAGCGGGACTGGAGGATCCTCTCTGGAGACTAGACACTCTCAGgatggagcctgctggagtcagataTTTGACCCCAGGTCCATGGAGatattcctgtgaactcacactggacacaaacacagtgaacaaaaaactcaaactgtctgacaacaacaggaaggtgacacgtGTGGAGGAGTATCagtcatatcctgatcatccagagaggtttaaCTACTgtcctcagctgctgtgtagagatggtctgactggtcgctgttactgggaggtggagacgAGAGGAGATGTtgatatatcagtgagttacagaggaatcaggaggagaggagacagtgctgactgtgtgtttggatggaatgatcagtcctggagtctggaCTGCTCTGATGGTCGTTACTCTGTCTGGCACAATAAGAGAGaaacatccatctcctcctcctctgtctctggtagagtagcagacatctcctcctcctctgtctttggtagagtagcagtgtatgttgactgtcctgctggctctctgtccttctacacagtctcctctgactcactgatccacctccacaccttcaacaccacattcactcagcctgtCTATCCTGGGTTCTGGCTCGGttctggttcctcagtgtctctgagtcCTGTGCAGGACGGAGAGTgtcctcctgtttctcactgctgatcagttgagtctgtacCACCGGGGTCGTCAACTACAATTTTTTCAAGGGCCAGAAtgtttctaagcagacactgtGGGGgacggactttcaaataaaggaaataaaatgaatttatacctaatacgtcTATTCTTGTTAGAAAtcttcactttcttactgaattaatactatttattttgtacatgtattagtgtgagaaAACCCGtagaaaacatggaaactccataatgataacttgctctttaact
>XR_005641110.1
GATTTCCTGTTCATCACTGCTGGTTGTTATAAAGTGTTACTGCTCCTCTGATCTCTGTTGTCACAGTGTTTCTGGTTCTACAggattctttctgtctcctcctcctcctcctcctcctcctcctcctgatgAAGCTGAAACAGGTTTGTTGTTTTGCTGTCAGAGACAAAGGTTTCAGTCGACACACACGATAAGATGTCTCGGTGTCCCAGAGGTCTTCCAGGTGGAGCTGCAGCGTGAGAAACCCTCCAATCAGAGCAGTCCAGTACACGTTATTCGTGAAAATCTGCTTCCTGACAGGTGTGGCTGTGACTCATCAGGAAACAACTCACCTGAGTTCTTCTCCGTCAACTCTTTGGACTGTTTGaagaaactgacccatcagagaccagaccctgctgaacctgaacctgtacctgaacctgaacccagctgtgggTCCATGAAGAGTCACCGGTCCATGGAGCCACCACTACTTTAAGAAAAGACCTGTAAGGGAGAGGAGAATAGAAATAGAGGAGATCCTACTTgaaatggaggagagaggatTGATGGAGAGACTTGAATGGCAGAAGGAGCGAATTGCAATGAAAAgtgaaattaaaatgttaagAAGAAGATTGAGGACCCATCAAAGACCAGAGtctcctgaacctgaacctgaacccagctgtgtgtcctttaaGAGTGACCGGTCACATGGTCGCTTTATTTCCTTTAAAAGTCAACAACCTTTTGCTGACAGAGGAAGAAAGGTGTATCTCTGTAGGGAGCCCCTCCGTAATGCCGTCAGACACCCAGAACAACAATCTGAGTCGGTCAGCGACAAAAACAGAACACTCAGTGGACGCAAACCGACAGTGAACAAATGAGCCTGCTAGAGTCAGATGGTTGACACCAGgtctgaggaagtATTCATGTGAACTtacactggacacaaacacagtgaacagaaacCTCAAACTGTCCGACatcaacaggaaggtgacattaGTGGAG

Function

NR:

description
PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18913 False 1584 TUCP 0.49 4 4363666 4372769
TU18953 False 372 lncRNA 0.49 2 4379216 4386683
XM_039819208.1 True 4855 mRNA 0.48 16 4369069 4449830
XR_005641110.1 False 999 transcript 0.47 7 4369073 4399043

Neighbor

gene id symbol gene type direction distance location
LOC120544944 NA coding upstream 138349 4223592 ~ 4225317 (+)
LOC120571237 NA coding upstream 164310 4185906 ~ 4199356 (+)
LOC120544917 NA coding upstream 209150 4150582 ~ 4154516 (+)
LOC120571287 LOC105358025 coding upstream 820461 3537939 ~ 3543205 (+)
LOC120554338 NA coding upstream 1015744 3347816 ~ 3347922 (+)
LOC120570934 NA coding downstream 472257 4922087 ~ 5063976 (+)
LOC120571428 NA coding downstream 716381 5166211 ~ 5173445 (+)
LOC120571154 NA coding downstream 769820 5219650 ~ 5230445 (+)
LOC120572059 NA coding downstream 997316 5447146 ~ 5461510 (+)
LOC120549121 NA coding downstream 1093461 5543291 ~ 5547333 (+)
G14240 NA non-coding upstream 30245 4332891 ~ 4333421 (+)
G14239 NA non-coding upstream 31093 4332286 ~ 4332573 (+)
G14217 NA non-coding upstream 31541 4331519 ~ 4332125 (+)
G14231 NA non-coding upstream 97497 4265666 ~ 4266169 (+)
LOC120571758 NA non-coding upstream 201367 4154666 ~ 4162299 (+)
G14256 NA non-coding downstream 21437 4471267 ~ 4537198 (+)
G14257 NA non-coding downstream 27707 4477537 ~ 4477913 (+)
G14207 NA non-coding downstream 44052 4493882 ~ 4496518 (+)
G14224 LOC107835021 non-coding downstream 44496 4494326 ~ 4515290 (+)
G14259 NA non-coding downstream 53493 4503323 ~ 4505632 (+)
G14148 NA other upstream 308581 4019244 ~ 4055085 (+)
LOC120544739 NA other upstream 1367351 2977851 ~ 2996315 (+)
zgc:162872 LOC103361195,LOC100694875,LOC101467947,LOC102198539,LOC102776046 other upstream 1398894 2948634 ~ 2964772 (+)
LOC120571130 NA other upstream 1570821 2610872 ~ 2792845 (+)
G14209 LOC102792843 other downstream 50343 4500173 ~ 4527377 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other downstream 351510 4801340 ~ 5417135 (+)
G14344 NA other downstream 1060927 5510757 ~ 5528619 (+)
rnf169 NA other downstream 1943232 6393062 ~ 6404425 (+)
spcs2 spcs2 other downstream 1958155 6407985 ~ 6417509 (+)

Expression


Co-expression Network