G14282 (LOC108250350,LOC108250349,LOC108250351)


Basic Information

Item Value
gene id G14282
gene name LOC108250350,LOC108250349,LOC108250351
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 4782335 ~ 5350072 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU19035
tctgagtctgagatcattttctagttaaagagccagttatcatcaagaagtttccatgttttttaggggTTTTCTCACATTAATACATGTTcaaaaaaaatagtattaattcagtaagaaagtgaacatTTCTAACAAGAATAgacgtattaggtataaatacattttattttatttatttgaaagtccgtcCCCCacagtgtctgcttagaaacaTTCTGGCCCTTGAAAAATTGTAGTTGACGACCCCGGCGgtacagactcaactgatcagctgtgagaaacaggaggagactctccgTCctacacaggacacagagacactgaggaaccaggaGACCAGAACCTGAACCCAAACCCAGGATAGAGAgtctgagtgaatgtggtgttgaaggtgtagaggtggatcagtgagtcagaggagactctgtagaaggacagagagccagcaggacagtccacatacactgctactctaccagagacagaggaggaggagatggatgtttGTCTCTTATTGTGCCAGACAGAGTAACCATCATCAGAGCagatcagactccaggactgatcattacatccaaacacacagtcatcactgtctcctctcctcctgattcctctgtaactcactgatatatcaACCCTTCCTCTcgtctccacctcccagtaacagcgaccagtcagaccatctctacacagcagctgaggccaggagtcaaacctctctggatgatcaggatatggctgatacTCCTCCACacgtgtcaccttcctgttgttgtcagacagtttgagttttctgttcactgtgtttgtgtccagtgtgagttcacaggaatctgacggagagaaggagacacaacacagctgcagttattaaccaatcagcactttgatgatgacatcagagggttgaatgag

Function

NR:

description
PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19035 True 921 lncRNA 0.45 3 4782335 5350072

Neighbor

gene id symbol gene type direction distance location
LOC120544944 NA coding upstream 557018 4223592 ~ 4225317 (+)
LOC120571237 NA coding upstream 582979 4185906 ~ 4199356 (+)
LOC120544917 NA coding upstream 627819 4150582 ~ 4154516 (+)
LOC120571287 LOC105358025 coding upstream 1239130 3537939 ~ 3543205 (+)
LOC120554338 NA coding upstream 1434413 3347816 ~ 3347922 (+)
LOC120572059 NA coding downstream 97074 5447146 ~ 5461510 (+)
LOC120549121 NA coding downstream 193219 5543291 ~ 5547333 (+)
col4a3 NA coding downstream 291582 5641654 ~ 5711859 (+)
sst1.2 LOC104933374,LOC103361206 coding downstream 366198 5716270 ~ 5720289 (+)
sst1.1 LOC101485677,LOC102296407,LOC102206005 coding downstream 388066 5738138 ~ 5743105 (+)
G14280 NA non-coding upstream 2038 4774497 ~ 4780297 (+)
G14272 NA non-coding upstream 7283 4702308 ~ 4775052 (+)
G14274 NA non-coding upstream 8183 4704653 ~ 4774152 (+)
G14196 NA non-coding upstream 11879 4682729 ~ 4770456 (+)
G14277 NA non-coding upstream 19433 4737226 ~ 4762902 (+)
LOC120553302 NA non-coding downstream 33558 5383630 ~ 5386305 (+)
G14359 NA non-coding downstream 181232 5531304 ~ 5532129 (+)
G14353 LOC104946957 non-coding downstream 198883 5548955 ~ 5559454 (+)
G14372 NA non-coding downstream 273604 5623676 ~ 5633716 (+)
G14376 NA non-coding downstream 285572 5635644 ~ 5636188 (+)
G14209 LOC102792843 other upstream 254958 4500173 ~ 4527377 (+)
LOC120570718 LOC103473932 other upstream 332505 4363666 ~ 4449830 (+)
G14246 NA other upstream 361513 4367603 ~ 4420822 (+)
G14148 NA other upstream 727250 4019244 ~ 4055085 (+)
LOC120544739 NA other upstream 1786020 2977851 ~ 2996315 (+)
G14344 NA other downstream 160685 5510757 ~ 5528619 (+)
rnf169 NA other downstream 1042990 6393062 ~ 6404425 (+)
spcs2 spcs2 other downstream 1057913 6407985 ~ 6417509 (+)
G15019 NA other downstream 1622773 6972845 ~ 6989396 (+)
G15173 LOC102077075 other downstream 2048029 7398101 ~ 7399141 (+)

Expression


Co-expression Network