LOC120570817


Basic Information

Item Value
gene id LOC120570817
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 3056729 ~ 3228824 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU19185
gctgctggaggaaAACATCTTCACTTTTGTGAAGAACGAGCTGAAGAAGATTCAGAAGGTTCTGagtccagattacccagaatgctcagagagtcagagggaggatgtggatgaagagcagaggaggagcagagaggcatttctgaagatcacaTTGCACTTCCTGAGGACAATGAAGCAGGAGGAGCTGGCTGACTGTCTGCAGAGCAGAAGTCACTCTGGAGTTTGTAAGCAGAAACTCAAATCTCACCTAAACAAGAAgctccagtgtgtgtttgaagggATTGCTAAATCAGAAAACCCaacccttctgaatcagatgttcacagagatctacatcatggagggagggactgcagaggtcaatgatgaacatgaggtcatacagattgaaacagcatctaggaaaccagaca
>XM_039819385.1
gtcagtctgcccagcagcatcaaacacacctggGCTCCATCtttatgctgctggaggaaAACATCTTCACTTTTGTGAAGAACGAGCTGAAGAAGATTCAGAAGGTTCTGagtccagattacccagaatgctcagagagtcagagggaggatgtggatgaagagcagaggaggagcagagaggcatttctgaagatcacaTTGCACTTCCTGAGGACAATGAAGCAGGAGGAGCTGGCTGACTGTCTGCAGAGCAGAAGTCACTCTGGAGTTTGTAAGCAGAAACTCAAATCTCACCTAAACAAGAAgctccagtgtgtgtttgaagggATTGCTAAATCAGAAAACCCaacccttctgaatcagatgttcacagagatctacatcatggagggagggactgcagaggtcaatgatgaacatgaggtcatacagattgaaacagcatctaggaaaccagacagaccagaaataacaatcagacaagaagacatctttaaagcccCACCTGGAAGAGATAAACCAATTagaacagtgatgacaaagggagtggctggcatcgggaaaacagtcttaacacagaagttcactctggactgggctgaaaaCAAAGCCAACCAGGAAATCCAGTTCATATTTCCATTCACTTTCAGAGAGCTGAACatgctgaaagagaaaaagtacagcttggtggaacttgttgatcacttctttagtgaaaccaaagaagcaggaatctgtaggtttgaagagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttccacaacactgagatcctgactgatgttacagagtccacctcagtgggtgtgctactgacaaacctcatcagggggaaactacttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctgagtgtgttgacatggtgacagaggtcagagggttcacagacccacagaaggaggagtacttcaggaagagatttaCAGATGAGGAGAAGGCCAGCAGAATAATTTCCTacatcaagacatcacgaagcctccacatcatgtgtcacatcccagtcttctgctggatcactgctacagttctggaggaggtgttgaagaccagagagggaggaaagctgcccaagaccctgactgagatgtacatccacttcctggtggttcagtccaaagtgaagaacatcaagtatgaccaaggagctgagacagatccacactggagtccagagagcaggaagactgttgagtctctgggaaaactggcttttgagcagctgcagaaaggcaccctgatcttctatgaatcagacctgacagagtcTGGCATAGATAtcagagcagcctcagtgtactcaggagtgttcacagagatctttaaagaggagagtggactgtaccaggacaaggtgttctgcttcatccatctgagtattcaggagtttctggctgctcttcatgtccatctgacatttTCCAACTCTGGAGTAAATCTGCTGTCAGAAGAACAATCAACATCAACACGtttctaccagagtgctgtggacgAAGCCTTACGaagtccaaatggacacctggacttgttcctccgcttcctcctcggtctttcactgcagaccaatcagacTCTCCTAGGAGGCCTGATGAAACAGACAGTAAGTAGCTCAGTGACCAATCAGGAAACAGTGGActacatcaagaagaagatcagtgagaatctgtctgcagagcgaagcatcaatctgttccactgtctgaatgaactgaatgatcatTCTTTAGTTGAGCAGATCCAAGAGGCCCTGATATCAGGACTCCTCTCAACATATAAACTGTCTCTTGCTCAGTTGTCAGCTCttgtcttcatcttactgtcatcagaagaagatctggacgtgtttgacctgaagaaatactcggcttcagaggaggctcttctgatGCTACTGCCAGTGTTCAAatcctccaacaaagctctactgagtggctgtcaCCTGTcaaagagaagctgtgaagctctgtcttcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacaacctgcaggattcagggtGGAAGCTGATCTCTcatggactgaagagtccacactgcacactggagactctcagactgagtgtCTGTAACCTGTcaaagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagttacaatgacctgcaggattcaggattgaagctgatctctgttggactgaagagtccacattgcacactggagactctaAGGCTGATTGGCTGTAACCTCTCAGAAAGAAGCTGtaaagctctgtcctcagttctcagctcccagtcctctagtctgagagtgctggacctgagtaacaatgaCCTGAAGGACTCAGGAGTGACGATGGTGTCTGATGGACTGAAGAttccacactgcagactggaaactctcagtctctcaggctgtctgatctcagaggTAGGCTGTACTTTTCTGGCTTCAGCTCTGAGATCCAatccctcccatctgagagagctggacctgagctacaatcatccaggagactcaggagtgaagctgctttCTACTTTACTGGAGGATCCAAactggagactggacactctcagGGTGGACCATGGTGGACCGCAGAGACTGAGACCTGGTGTAaggaagtatgtctgtgaactggaactggacacaaacacagtacacagaaaactcaaactgtctgacaacaacaggaaggtgacataTGTGGAGGAGTATCagtcatatcctgatcatccagacagATTTGACCACTCggctcagctgctgtgtagaaatggtctgactggtcgctgttactgggaggttgagaggagaggagagattgatatatcagtgagttacagaggaattaGCAGGAGAGGAAACAGTCAAGACTCTATgtttggagggaatgatcattccTGGAGACTGCAGTGCTCTGATGGTGGTTACTCTGTCTGGCACAATAAGAGAAGAACAcgcatctcctcctcctcttctgacAGAGTAGGAGTGTATGTGGACGTTCCTGCTGGCATTCTTTCCTTCTACACAGtatcctctgactcactgatccacctccacaccttcaacaccacattcactcagcctctctatccTGGGTTTTGGATCTGgtctggttcctcagtgtctctgtgtcctgtgcaGGACTGAGAGTTTATCCTGTGGACAGAAACACTGACTGAAGAACAGCTGCTGAAATCAAAGTTCAATCTGTCACCATCACACCCTATGCACTGTGAAGCAGATCTGATTTCATTTCTTTCATTATCAACATTCGACTACAAACACTTCATCATATTTAACATCTAAACAATAATGAACTATCAATGCTAactatttcttttatattttgaattatgCTGTAATGTAATGAATGTAATAGACCGAATCACGGTGACGTCGCTCTAACACAAAAAGCTCTTCTGTGTAGACAAATGGCCGTTGATTTGAATTGCAGAGATTGTGAAATTGGCAAACTTGTTCATTTCtattgtcattttcagccgTTACTTTTAATGTTGAAAGATGTATAGTTAAACACAGAGGTCCCACCTATGTGTGGTCTCTGCtgttgcttattttctgtactgtttTGCTTTGCTAGCATCTTAAATAAACCAAATCTAGCGTTAGAAACCCCAACATCTCTCTGTCGGTCAGActgactgctagtttgggtggtgtcattttcttaagtctgtggcccaacaggtaaatAAACATTAGTAaaagtgttgacatatgaaagcatcaaacatgtaTTTTAGATGAAGGGGAGGAGAGTATATCCAGTTGTTCCTTGTTCCTGTTTGCTCAGCGCCGTTAAATTCTAAGTACGGGACGCAGAAGTTTTCTGCCCGGAacttattgtaaacaaatattGTTATTGGATCTATACTGTCATTAATTTAAAAcgtggattttctttttaaacattcatattttcttttgaGGGCAGTCAAATGATTTCTGTTTCCCAATCCTATTTCATGGCTCACCTGATCCATTTCCTTTGCTCTTCATTCAAATACTATGAAAAGCTATGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19185 False 416 lncRNA 0.47 2 3228075 3228624
XM_039819385.1 True 4194 mRNA 0.45 10 3056729 3228824

Neighbor

gene id symbol gene type direction distance location
ostn ostn,LOC102776327 coding downstream 46668 3001153 ~ 3010061 (-)
wdr74 wdr74 coding downstream 84012 2970130 ~ 2972717 (-)
LOC120544710 LOC103364778,LOC102782303,LOC102212015,LOC101467851,LOC101170765,LOC103393563 coding downstream 967420 2077680 ~ 2089309 (-)
LOC120544691 NA coding downstream 1002006 2041770 ~ 2054723 (-)
LOC120544682 NA coding downstream 1028780 2024856 ~ 2027949 (-)
LOC120571140 NA coding upstream 21348 3250172 ~ 3258908 (-)
LOC120554376 NA coding upstream 44852 3273676 ~ 3273783 (-)
LOC120554353 NA coding upstream 46354 3275178 ~ 3275285 (-)
LOC120554360 NA coding upstream 47858 3276682 ~ 3276791 (-)
LOC120554359 NA coding upstream 49348 3278172 ~ 3278279 (-)
G13984 NA non-coding downstream 41409 2977860 ~ 3015320 (-)
G13997 NA non-coding downstream 71155 2985324 ~ 2985574 (-)
G13991 NA non-coding downstream 88121 2964592 ~ 2968608 (-)
G13970 NA non-coding downstream 171099 2885295 ~ 2885630 (-)
G13969 NA non-coding downstream 172681 2882907 ~ 2884048 (-)
LOC120571770 NA non-coding upstream 173644 3402468 ~ 3410949 (-)
G14469 NA non-coding upstream 360665 3589489 ~ 3639043 (-)
G14481 NA non-coding upstream 461456 3690280 ~ 3690581 (-)
G14428 NA non-coding upstream 501776 3730600 ~ 3763944 (-)
G14499 NA non-coding upstream 553227 3782051 ~ 3874216 (-)
G13995 iws1 other downstream 72231 2981061 ~ 2984498 (-)
G13651 NA other downstream 1675008 1302896 ~ 1381721 (-)
LOC120571038 NA other downstream 1858986 1166598 ~ 1197743 (-)
G13587 NA other downstream 1859043 1127891 ~ 1197686 (-)
LOC120571545 NA other downstream 2078991 969648 ~ 977738 (-)
G14426 il1rap,LOC106536183,LOC107379882,LOC108229411,LOC106536182 other upstream 244113 3472937 ~ 3722632 (-)
LOC120544895 LOC102787186 other upstream 670629 3899453 ~ 4015956 (-)
LOC120571085 mb21d2 other upstream 799916 4028740 ~ 4055084 (-)
G14552 LOC102792843,LOC102297898 other upstream 1297250 4526074 ~ 5193378 (-)
G14579 NA other upstream 1834164 5062988 ~ 5111979 (-)

Expression


Co-expression Network