G14426 (il1rap,LOC106536183,LOC107379882,LOC108229411,LOC106536182)


Basic Information

Item Value
gene id G14426
gene name il1rap,LOC106536183,LOC107379882,LOC108229411,LOC106536182
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 3472937 ~ 3722632 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU19241
acacatacaaacacccacacacatacgctgctgctgctataaCTTATCTTTTCATGTTGCGCATTTACGCAGATTTAAAACCAGAACGTGTCGCTGATACGtctttatttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgacagtaaCTCTTCTCTGTTTTAGTTCCTGTCTCGGCTATAATTGCAACACATCGCTGCCTTTCATAAGTTAAATATTAGGCTACCACCACGGGACTTTATTTCGGGGCCCATTAATTAttcatacagacagacagagacacacacacacaggatcatACGGGAAGACTTCCCGGACCACCGGGGACCGTCCCGGTGCGCCGCCGTTACTCCTGGAGATTTACAGCCGCGGCCGAGCCCTGACACAGGCCGTTAATCATCAGAGCTCCCGGTGCTGCGGTGCTAACCGgaaggtgagtgtgtgtgtgtctgtgtgtgtgagtgtgagtcaGCTGCAGGACACTGTCAcacttctctcacacacagacacacgcacagcaAGACCCGGGGTACCCCTACAGTCCCATCCGGACCCGCCCCGCGCACAGTTCTGCTACCCCCCGCCCGCCCGTCCTCCGGGACGCTCAGCTGAATATCACCGAATGATCCATCCCGACCTGGCAGACACCGAGCAGACCTTCCAGACCGGCTGTCAATGGCGTCTTTAATCCgcaccctcctcttcctcaccctCGTGGTGGGCGGGACTACAGCAGCTGTCGGTCTGGCCAGCCAATCAGAGCCCAGGTGTTTGGACTGGGGGGAGTCCAGCGAGCGGGCGGTGTCGGTCCTGGAGGGCGAGGCCGGCTGGCTCTCCTGCCCTCTTTTCTCTCATCCCTCGGTCTACAACTACACCTCCATGCAGAGCGCCGGGCACAACCTCGTCTGGTACCGCCTCCCAGAGGGCCACGAACTGGAGCAGCCAATCACGTACAGTGCGCGGTTCAGCAAAGACCGAGAGAGGCTGTGGCTGCAGCCGGCCACCGCCGCTGACACCGGCCTCTACATCTGCATGCTACGG
>TU19243
cagatgataAGGAGTACGACGTGTACATCTCGTACGCGAGGAGCGGCGAGGAGGAGCAGTTTGTTCTGTCGACGCTGCGCAGCGTTCTGGAGAACGAGCTTGGGTACTCCGTGTGCATCTTCGACAGAGACAGTCTGCCGGGAGGGACCATCACAGATGAGACTCTGAGTTTCGTGGCTCGTAGCCGGCGCCTCCTGGTGGTCGTTCGCCCGGGCTACGCCTCGCAGGGCTCCCAGGCTCTGCTGGAGCTGAAGGCCGGCATCGACGGCATGGCGCGGGGCGGGCACCTGCGGGTGATCCTGGTCCAGTACAAGCCGGTGCGACGGCAGGTCTGGGTGCGGGAGCTGAGGCGGGCCCGCGTGGCCCTGGCTCTGGTTCGCTGGCAGGGGGACAAGTCCCGGGA

Function

symbol description
il1rap Predicted to enable interleukin-1 receptor activity; interleukin-1 receptor binding activity; and protein tyrosine kinase binding activity. Predicted to be involved in positive regulation of NF-kappaB transcription factor activity and positive regulation of synapse assembly. Predicted to act upstream of or within cytokine-mediated signaling pathway and positive regulation of dendrite development. Located in membrane.

NR:

description
interleukin-1 receptor accessory protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19241 True 1044 TUCP 0.57 4 3704905 3722632
TU19243 False 403 lncRNA 0.66 2 3472937 3476382

Neighbor

gene id symbol gene type direction distance location
LOC120571310 NA coding downstream 28999 3442448 ~ 3443938 (-)
LOC120544846 NA coding downstream 30621 3441109 ~ 3442316 (-)
LOC120554328 NA coding downstream 79900 3392932 ~ 3393037 (-)
LOC120544814 NA coding downstream 110553 3359156 ~ 3362384 (-)
trnav-aac NA coding downstream 114740 3358125 ~ 3358197 (-)
LOC120571265 fgf12,fgf12b,LOC104939444,LOC102791340,LOC102235588,LOC107670129 coding upstream 17130 3739762 ~ 3791682 (-)
LOC120571031 NA coding upstream 199150 3921782 ~ 3923856 (-)
LOC120544902 LOC103361205,LOC106936657,LOC106910224,LOC103150884,LOC103475299 coding upstream 329560 4052192 ~ 4078128 (-)
LOC120544909 NA coding upstream 365544 4088176 ~ 4138553 (-)
LOC120570840 NA coding upstream 938982 4661614 ~ 5252192 (-)
LOC120571770 NA non-coding downstream 61988 3402468 ~ 3410949 (-)
G14383 NA non-coding downstream 346724 3116707 ~ 3126213 (-)
G13984 NA non-coding downstream 457617 2977860 ~ 3015320 (-)
G13997 NA non-coding downstream 487363 2985324 ~ 2985574 (-)
G13991 NA non-coding downstream 504329 2964592 ~ 2968608 (-)
G14428 NA non-coding upstream 7968 3730600 ~ 3763944 (-)
G14499 NA non-coding upstream 59419 3782051 ~ 3874216 (-)
G14496 NA non-coding upstream 146262 3868894 ~ 3870735 (-)
G14507 NA non-coding upstream 148770 3871402 ~ 3871685 (-)
G14508 NA non-coding upstream 167091 3889723 ~ 3890506 (-)
LOC120570817 NA other downstream 244113 3056729 ~ 3228824 (-)
G13995 iws1 other downstream 488439 2981061 ~ 2984498 (-)
G13651 NA other downstream 2091216 1302896 ~ 1381721 (-)
LOC120571038 NA other downstream 2275194 1166598 ~ 1197743 (-)
G13587 NA other downstream 2275251 1127891 ~ 1197686 (-)
LOC120544895 LOC102787186 other upstream 176821 3899453 ~ 4015956 (-)
LOC120571085 mb21d2 other upstream 306108 4028740 ~ 4055084 (-)
G14552 LOC102792843,LOC102297898 other upstream 803442 4526074 ~ 5193378 (-)
G14579 NA other upstream 1340356 5062988 ~ 5111979 (-)
G14553 LOC108250350,LOC108250351,LOC108241855,LOC108249964,LOC107380983,LOC108242154,LOC108242155 other upstream 1436698 5159330 ~ 5350376 (-)

Expression


Co-expression Network