G14880


Basic Information

Item Value
gene id G14880
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6378775 ~ 6417560 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU19984
tagtacttttactgcagtagaGGATCATATATAAACTCAGTCAGGAAGTAGTTTGGGTAACACTCTCCATCTTTAATACGTTCAAACACAACTTACAgagaaataataatagaaataatACCAAACATTCAAAATCAAAGTTTCAGTCCACTTCCTGTCGTAAGGCATCAACACGCCACTGTTTAGcaacgttagcttagcataacgaTGCTAATCTGTCAACAGAATAaaagattaaactttaaacagtCGATGAAAATCTGCTAAATGTTTTCATTCTTATTTTACATTCCCCACAGCGGCCACATGGCCCCGCCCACCTGGAATActgcgctgtgattggtggaaaacGTCACGTCTGAAGGGCTTGaaattaataacaataaaaaaagtttttttaacataactGAAAGTACAAAATCTAACGAGTGGCGACGCAACCGAGAAACATGGAAggtttttttaaaagccttcAAACAGGAACTCAAACTgttattatgggatggatccagAAAGAACAACCTGAATCAACTCTTTTATAAAACGTTAATTTGTTAACGATGTCCAACGAGCTGCTGAACGCCGCGTCGCTGCCCGATGGGAGTCGCGCACGCGTCACTTTTGCGACAGGTAGCctccaagatgctaacggctttCTGTGCTAACGCACAAAGTCtaggagctaacgttagcaatctaaaaTGTGTCTGAAATGACTGCTGCTGCCGCTAGCTACAAGCTagcatcaaacacaacaaaggctgtcactggaatggtgttttgagctaacgttagcaatcagacaatcATAGACAGCCACAACGTttctgaaatgatttccatcttctgttacagtatgtaaagagaaacgtTTATTGTTTAGTGCGACTCCCATGGGGCAGTGACGGTCCTCCATCCTGTTGGAGTGTGTTGGCGTACACAGCGATGCTTGGGTTGTCTTCCACTCCACCACCGCGACACTTTGGGGTTTTTCAGGGTCcaaattttgacattttttggtcacttttatCCAAGTATTTGTCACGTTTTTTCTGAgctatttttttctaaaaaaaaaaaaaaaaaaaaaaaaaagctctttcCGACACGGTCACTTTGTTCAactttcttttatcattttattcttCCAATGCTATCAAACTGAACCCTTTAAATTCAGtcaaagtagtgaactgatttgtttttgtacCGGTTGAGAGCGTTGTGGTGAAATATCCACGTTAATATCcacgttatttatttttatttttttattaagttggttgaaagaaacccaaaattcAGATTTTTAGAAAATGCGTCAAATTTGAGAAGAGAGTTAATGTCAACGCTGCCACCGCAACTcagaaatatttgtttttccgtttttttttttgtctgtcacttttttcgtcattttacttctttttttttccatttaacattttttccaaaaaaaaaaaaaaaaaattctgtttctGAGACAAATCCTTCGATACGGGTCATGTAAACAGAATATTTAttgattaatttattaattacagGGACTGTGCATATTAATACACATTTCTGTCAGTATGCCAGCGTTAGCCAGTTACCCTTCTGTTTGGATCTGGAGAATAAAGTTTATTTTCTGACTGTAGTACTGTAGTATAGTACTGTAGTATAGTACTGTAGTATAGTACTGTAGCATAGTACTGTAGCATAGTACTGTAGCATAGTACTGTAGCATAGTACTGTAGTATAGTACTGTAGCATAGTACTGTAGTATAGTACTGTACTGTCTGATGGAGACGGGTGTGATATTCGGGTATGATTCACGTTTTTAGAAAGCATTCTTTGGACGTGTTTACAACTCAGTCAGctcagctctgtgtgttgctatggttactaGCTCCGACTTTGACGTGATGAAGATTTATATAATCGCATATAAACACAAATCgccgagaaaaaaaaaaaaaaaaagctaattaaaaaaaaaatttaaaaatatgattAACTTTTATAATTCCATTTTCTGTTTTCCTGTGAATCTCTAAATTATAATCCTgtgatgaaaatgttttttaacaaTTCTGGGAATTAAGACCTCGAGGTGACATAACACCAGTTTATTGGTTGCATTTCATTTGGATGAAAACTTaacttcagagagagagagagagggagggagagagagagagagagagagagagagagacagagacagagagagagacagaaagagagacagaaagagagagtgagacagagagagagagagaaagagagagagagagacagagagagagagagacagagagagagagagacagagagagacagagagagagagagagaaagagagagagacagagagagagagagagacagaaagagagagagagacagagagagacagagagagagacacagagagagacagagagagagagagagagagagagagagagacagagagagagagagagagacagagatagagacacagagagagagacagagagagagagagagacgagagagagagagagagagacacagagagagagagagacagagagagacagagatagagacacagagagagagagagagacagaaagagagagagacacagagagagagatcatgcgtggcagggcacctttaactgtgatggagtctctctctctctagtctGATTCTGGTGTTCTGAGATGAAACCAAACCGGCGCCCTGCCGTTAGGGTCCCAGCGGAGTTATTTGGTCTTCTTGTCCGAGGCCAGCGCGTCGTGCAGCTGAGAAACACACTTCTCAAACTGGTCCATGGCCAGCGTCCCGCTGTCGTCGAAGAACGCCGCCACAGACTTGGTGAACTCCGCTTCCCGACACTTCTTCGACTTTCCATCGATGAAGGAAACTCTCAGAGTGTACTGGTCATCGAaccaaacacacacacacactcac
>TU19990
tagtacttttactgcagtagaGGATCATATATAAACTCAGTCAGGAAGTAGTTTGGGTAACACTCTCCATCTTTAATACGTTCAAACACAACTTACAgagaaataataatagaaataatACCAAACATTCAAAATCAAAGTTTCAGTCCACTTCCTGTCGTAAGGCATCAACACGCCACTGTTTAGcaacgttagcttagcataacgaTGCTAATCTGTCAACAGAATAaaagattaaactttaaacagtCGATGAAAATCTGCTAAATGTTTTCATTCTTATTTTACATTCCCCACAGCGGCCACATGGCCCCGCCCACCTGGAATActgcgctgtgattggtggaaaacGTCACGTCTGAAGGGCTTGaaattaataacaataaaaaaagtttttttaacataactGAAAGTACAAAATCTAACGAGTGGCGACGCAACCGAGAAACATGGAAggtttttttaaaagccttcAAACAGGAACTCAAACTgttattatgggatggatccagAAAGAACAACCTGAATCAACTCTTTTATAAAACGTTAATTTGTTAACGATGTCCAACGAGCTGCTGAACGCCGCGTCGCTGCCCGATGGGAGTCGCGCACGCGTCACTTTTGCGACAGGTAGCctccaagatgctaacggctttCTGTGCTAACGCACAAAGTCtaggagctaacgttagcaatctaaaaTGTGTCTGAAATGACTGCTGCTGCCGCTAGCTACAAGCTagcatcaaacacaacaaaggctgtcactggaatggtgttttgagctaacgttagcaatcagacaatcATAGACAGCCACAACGTttctgaaatgatttccatcttctgttacagtatgtaaagagaaacgtTTATTGTTTAGTGCGACTCCCATGGGGCAGTGACGGTCCTCCATCCTGTTGGAGTGTGTTGGCGTACACAGCGATGCTTGGGTTGTCTTCCACTCCACCACCGCGACACTTTGGGGTTTTTCAGGGTCcaaattttgacattttttggtcacttttatCCAAGTATTTGTCACGTTTTTTCTGAgctatttttttctaaaaaaaaaaaaaaaaaaaaaaaaaagctctttcCGACACGGTCACTTTGTTCAactttcttttatcattttattcttCCAATGCTATCAAACTGAACCCTTTAAATTCAGtcaaagtagtgaactgatttgtttttgtacCGGTTGAGAGCGTTGTGGTGAAATATCCACGTTAATATCcacgttatttatttttatttttttattaagttggttgaaagaaacccaaaattcAGATTTTTAGAAAATGCGTCAAATTTGAGAAGAGAGTTAATGTCAACGCTGCCACCGCAACTcagaaatatttgtttttccgtttttttttttgtctgtcacttttttcgtcattttacttctttttttttccatttaacattttttccaaaaaaaaaaaaaaaaaattctgtttctGAGACAAATCCTTCGATACGGGTCATGTAAACAGAATATTTAttgattaatttattaattacagGGACTGTGCATATTAATACACATTTCTGTCAGTATGCCAGCGTTAGCCAGTTACCCTTCTGTTTGGATCTGGAGAATAAAGTTTATTTTCTGACTGTAGTACTGTAGTATAGTACTGTAGTATAGTACTGTAGCATAGTACTGTAGCATAGTACTGTAGTATAGTACTGTAGCATAGTACTGTAGTATAGTACTGTACTGTCTGATGGAGACGGGTGTGATATTCGGGTATGATTCACGTTTTTAGAAAGCATTCTTTGGACGTGTTTACAACTCAGTCAGctcagctctgtgtgttgctatggttactaGCTCCGACTTTGACGTGATGAAGATTTATATAATCGCATATAAACACAAATCgccgagaaaaaaaaaaaaaaaaagctaattaaaaaaaaaatttaaaaatatgattAACTTTTATAATTCCATTTTCTGTTTTCCTGTGAATCTCTAAATTATAATCCTgtgatgaaaatgttttttaacaaTTCTGGGAATTAAGACCTCGAGGTGACATAACACCAGTTTATTGGTTGCATTTCATTTGGATGAAAACTTaacttcagagagagagagagagggagagagagagagacagagatagagacacagagagagagagagacacagagagagagagagacacagagagagagagagagagaga
>TU19992
tagtacttttactgcagtagaGGATCATATATAAACTCAGTCAGGAAGTAGTTTGGGTAACACTCTCCATCTTTAATACGTTCAAACACAACTTACAgagaaataataatagaaataatACCAAACATTCAAAATCAAAGTTTCAGTCCACTTCCTGTCGTAAGGCATCAACACGCCACTGTTTAGcaacgttagcttagcataacgaTGCTAATCTGTCAACAGAATAaaagattaaactttaaacagtCGATGAAAATCTGCTAAATGTTTTCATTCTTATTTTACATTCCCCACAGCGGCCACATGGCCCCGCCCACCTGGAATActgcgctgtgattggtggaaaacGTCACGTCTGAAGGGCTTGaaattaataacaataaaaaaagtttttttaacataactGAAAGTACAAAATCTAACGAGTGGCGACGCAACCGAGAAACATGGAAggtttttttaaaagccttcAAACAGGAACTCAAACTgttattatgggatggatccagAAAGAACAACCTGAATCAACTCTTTTATAAAACGTTAATTTGTTAACGATGTCCAACGAGCTGCTGAACGCCGCGTCGCTGCCCGATGGGAGTCGCGCACGCGTCACTTTTGCGACAGGTAGCctccaagatgctaacggctttCTGTGCTAACGCACAAAGTCtaggagctaacgttagcaatctaaaaTGTGTCTGAAATGACTGCTGCTGCCGCTAGCTACAAGCTagcatcaaacacaacaaaggctgtcactggaatggtgttttgagctaacgttagcaatcagacaatcATAGACAGCCACAACGTttctgaaatgatttccatcttctgttacagtatgtaaagagaaacgtTTATTGTTTAGTGCGACTCCCATGGGGCAGTGACGGTCCTCCATCCTGTTGGAGTGTGTTGGCGTACACAGCGATGCTTGGGTTGTCTTCCACTCCACCACCGCGACACTTTGGGGTTTTTCAGGGTCcaaattttgacattttttggtcacttttatCCAAGTATTTGTCACGTTTTTTCTGAgctatttttttctaaaaaaaaaaaaaaaaaaaaaaaaaagctctttcCGACACGGTCACTTTGTTCAactttcttttatcattttattcttCCAATGCTATCAAACTGAACCCTTTAAATTCAGtcaaagtagtgaactgatttgtttttgtacCGGTTGAGAGCGTTGTGGTGAAATATCCACGTTAATATCcacgttatttatttttatttttttattaagttggttgaaagaaacccaaaattcAGATTTTTAGAAAATGCGTCAAATTTGAGAAGAGAGTTAATGTCAACGCTGCCACCGCAACTcagaaatatttgtttttccgtttttttttttgtctgtcacttttttcgtcattttacttctttttttttccatttaacattttttccaaaaaaaaaaaaaaaaaattctgtttctGAGACAAATCCTTCGATACGGGTCATGTAAACAGAATATTTAttgattaatttattaattacagGGACTGTGCATATTAATACACATTTCTGTCAGTATGCCAGCGTTAGCCAGTTACCCTTCTGTTTGGATCTGGAGAATAAAGTTTATTTTCTGACTGTAGTACTGTAGTATAGTACTGTAGTATAGTACTGTAGCATAGTACTGTAGCATAGTACTGTAGTATAGTACTGTAGCATAGTACTGTAGTATAGTACTGTACTGTCTGATGGAGACGGGTGTGATATTCGGGTATGATTCACGTTTTTAGAAAGCATTCTTTGGACGTGTTTACAACTCAGTCAGctcagctctgtgtgttgctatggttactaGCTCCGACTTTGACGTGATGAAGATTTATATAATCGCATATAAACACAAATCgccgagaaaaaaaaaaaaaaaaagctaattaaaaaaaaaatttaaaaatatgattAACTTTTATAATTCCATTTTCTGTTTTCCTGTGAATCTCTAAATTATAATCCTgtgatgaaaatgttttttaacaaTTCTGGGAATTAAGACCTCGAGGTGACATAACACCAGTTTATTGGTTGCATTTCATTTGGATGAAAACTTaacttcagagagagagagagagggagggagagagagagagagagagagagagagagacagagacagagagagagacagaaagagagacagaaagagagagtgagacagagagagagagagaaagagagagagagagacagagagagagagagagagagagagagagaaagagagagagacagagagagagagagagacagaaagagagagagagacagagagagacagagagagagacacagagagagacagagagagagagagagagagagacagagagagagagagacagagagagacagagatagagacacagagagagagagagagacagaaagagagagagacacagagagagagatcatgcgtggcagggcacctttaactgtgatggagtctctctctctctagtctGATTCTGGTGTTCTGAGATGAAACCAAACCGGCGCCCTGCCGTTAGGGTCCCAGCGGAGTTATTTGGTCTTCTTGTCCGAGGCCAGCGCGTCGTGCAGCTGAGAAACACACTTCTCAAACTGGTCCATGGCCAGCGTCCCGCTGTCGTCGAAGAACGCCGCCACAGACTTGGTGAACTCCGCTTCCCGACACTTCTTCGACTTTCCATCGATGAAGGAAACTCTCAGAGTGTACTGGTCATCGAaccaaacacacacacacactcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19984 True 2952 lncRNA 0.40 2 6390614 6417560
TU19990 False 2216 lncRNA 0.47 6 6378775 6417560
TU19992 False 2788 lncRNA 0.45 5 6390614 6417560

Neighbor

gene id symbol gene type direction distance location
LOC120545232 NA coding downstream 101930 6275892 ~ 6276845 (-)
LOC120545072 NA coding downstream 406859 5970990 ~ 5971916 (-)
LOC120545063 NA coding downstream 414905 5962920 ~ 5963870 (-)
LOC120545043 NA coding downstream 429912 5939672 ~ 5948863 (-)
LOC120545036 NA coding downstream 459765 5918054 ~ 5919010 (-)
LOC120553580 NA coding upstream 24212 6441772 ~ 6442698 (-)
LOC120545295 NA coding upstream 49288 6466848 ~ 6467780 (-)
LOC120545304 NA coding upstream 65431 6482991 ~ 6484025 (-)
LOC120545387 NA coding upstream 128531 6546091 ~ 6547017 (-)
LOC120545488 NA coding upstream 328620 6746180 ~ 6751981 (-)
G14877 NA non-coding downstream 15379 6363124 ~ 6363396 (-)
G14846 NA non-coding downstream 65711 6260858 ~ 6313064 (-)
G14840 NA non-coding downstream 128350 6249908 ~ 6250425 (-)
G14835 NA non-coding downstream 128953 6246107 ~ 6249822 (-)
G14833 NA non-coding downstream 154403 6223978 ~ 6224372 (-)
G14923 NA non-coding upstream 39838 6457398 ~ 6457867 (-)
G14925 NA non-coding upstream 59214 6476774 ~ 6477418 (-)
G14937 NA non-coding upstream 148977 6566537 ~ 6566808 (-)
G14940 NA non-coding upstream 160678 6578238 ~ 6578461 (-)
G14943 NA non-coding upstream 191397 6608957 ~ 6609212 (-)
G14853 NA other downstream 75963 6302349 ~ 6302812 (-)
G14754 NA other downstream 672798 5703387 ~ 5705977 (-)
col4a4 LOC104946957 other downstream 739575 5555474 ~ 5639200 (-)
G14722 NA other downstream 844948 5510521 ~ 5533827 (-)
LOC120554300 cldn1,LOC103361214 other downstream 868740 5489256 ~ 5510035 (-)
arrb1 arrb1,LOC102797194,LOC100705119 other upstream 523695 6941255 ~ 6967985 (-)
atg16l2 NA other upstream 603410 7020970 ~ 7032540 (-)
G15110 NA other upstream 684806 7102366 ~ 7104090 (-)
G15114 abcc5 other upstream 694139 7111699 ~ 7113608 (-)
LOC120543742 abcc5 other upstream 697159 7114719 ~ 7126398 (-)

Expression


Co-expression Network