Gene
RNA
| Item | Value |
|---|---|
| gene id | G14908 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 6476674 ~ 6477146 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0050877 | nervous system process | biological_process |
| GO:0050953 | sensory perception of light stimulus | biological_process |
| GO:0007600 | sensory perception | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0003008 | system process | biological_process |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU20028 | True | 383 | lncRNA | 0.43 | 2 | 6476674 | 6477146 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| abcg1 | abcg1,LOC103475277,LOC103152983,LOC102205798 | coding | upstream | 28346 | 6420513 ~ 6448328 (+) |
| LOC120549609 | NA | coding | upstream | 123673 | 6350475 ~ 6353001 (+) |
| LOC120545249 | NA | coding | upstream | 152264 | 6323484 ~ 6324410 (+) |
| LOC120545240 | NA | coding | upstream | 185696 | 6290058 ~ 6290978 (+) |
| LOC120545220 | NA | coding | upstream | 302164 | 6169219 ~ 6174510 (+) |
| LOC120545383 | NA | coding | downstream | 33599 | 6510745 ~ 6520784 (+) |
| LOC120572075 | NA | coding | downstream | 35031 | 6512177 ~ 6516516 (+) |
| LOC120552698 | NA | coding | downstream | 48062 | 6525208 ~ 6526163 (+) |
| LOC120572775 | NA | coding | downstream | 57323 | 6534469 ~ 6535401 (+) |
| LOC120552719 | NA | coding | downstream | 64217 | 6541363 ~ 6542380 (+) |
| G14907 | NA | non-coding | upstream | 2905 | 6473510 ~ 6473769 (+) |
| G14904 | NA | non-coding | upstream | 10419 | 6465508 ~ 6466255 (+) |
| G14902 | NA | non-coding | upstream | 12853 | 6458942 ~ 6463821 (+) |
| G14901 | NA | non-coding | upstream | 17856 | 6458124 ~ 6458818 (+) |
| G14863 | lipt2 | non-coding | upstream | 88274 | 6381723 ~ 6388400 (+) |
| G14917 | NA | non-coding | downstream | 17242 | 6494388 ~ 6494650 (+) |
| G14928 | NA | non-coding | downstream | 31425 | 6508571 ~ 6509974 (+) |
| G14930 | NA | non-coding | downstream | 33989 | 6511135 ~ 6511886 (+) |
| G14939 | NA | non-coding | downstream | 101076 | 6578222 ~ 6578453 (+) |
| LOC120572178 | NA | non-coding | downstream | 212885 | 6690031 ~ 6690891 (+) |
| spcs2 | spcs2 | other | upstream | 59165 | 6407985 ~ 6417509 (+) |
| rnf169 | NA | other | upstream | 72249 | 6393062 ~ 6404425 (+) |
| G14344 | NA | other | upstream | 948055 | 5510757 ~ 5528619 (+) |
| G14187 | LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 | other | upstream | 1059539 | 4801340 ~ 5417135 (+) |
| G14209 | LOC102792843 | other | upstream | 1949297 | 4500173 ~ 4527377 (+) |
| G15019 | NA | other | downstream | 495699 | 6972845 ~ 6989396 (+) |
| G15173 | LOC102077075 | other | downstream | 920955 | 7398101 ~ 7399141 (+) |
| G15234 | NA | other | downstream | 1014219 | 7491365 ~ 7492057 (+) |
| rffl | rffl | other | downstream | 1329663 | 7806809 ~ 7853429 (+) |
| LOC120543808 | NA | other | downstream | 1349464 | 7826610 ~ 7828087 (+) |
