Gene
RNA
| Item | Value |
|---|---|
| gene id | G14930 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 6511135 ~ 6511886 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0050877 | nervous system process | biological_process |
| GO:0050953 | sensory perception of light stimulus | biological_process |
| GO:0007600 | sensory perception | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0003008 | system process | biological_process |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU20051 | True | 752 | lncRNA | 0.38 | 1 | 6511135 | 6511886 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| abcg1 | abcg1,LOC103475277,LOC103152983,LOC102205798 | coding | upstream | 62807 | 6420513 ~ 6448328 (+) |
| LOC120549609 | NA | coding | upstream | 158134 | 6350475 ~ 6353001 (+) |
| LOC120545249 | NA | coding | upstream | 186725 | 6323484 ~ 6324410 (+) |
| LOC120545240 | NA | coding | upstream | 220157 | 6290058 ~ 6290978 (+) |
| LOC120545220 | NA | coding | upstream | 336625 | 6169219 ~ 6174510 (+) |
| LOC120572075 | NA | coding | downstream | 291 | 6512177 ~ 6516516 (+) |
| LOC120552698 | NA | coding | downstream | 13322 | 6525208 ~ 6526163 (+) |
| LOC120572775 | NA | coding | downstream | 22583 | 6534469 ~ 6535401 (+) |
| LOC120552719 | NA | coding | downstream | 29477 | 6541363 ~ 6542380 (+) |
| LOC120545393 | NA | coding | downstream | 38804 | 6550690 ~ 6551630 (+) |
| G14928 | NA | non-coding | upstream | 1161 | 6508571 ~ 6509974 (+) |
| G14917 | NA | non-coding | upstream | 16485 | 6494388 ~ 6494650 (+) |
| G14908 | NA | non-coding | upstream | 33989 | 6476674 ~ 6477146 (+) |
| G14907 | NA | non-coding | upstream | 37366 | 6473510 ~ 6473769 (+) |
| G14904 | NA | non-coding | upstream | 44880 | 6465508 ~ 6466255 (+) |
| G14939 | NA | non-coding | downstream | 66336 | 6578222 ~ 6578453 (+) |
| LOC120572178 | NA | non-coding | downstream | 178145 | 6690031 ~ 6690891 (+) |
| G15012 | NA | non-coding | downstream | 432436 | 6944322 ~ 6991913 (+) |
| G15021 | NA | non-coding | downstream | 465913 | 6977799 ~ 6978105 (+) |
| G15032 | NA | non-coding | downstream | 504909 | 7016795 ~ 7017311 (+) |
| spcs2 | spcs2 | other | upstream | 93626 | 6407985 ~ 6417509 (+) |
| rnf169 | NA | other | upstream | 106710 | 6393062 ~ 6404425 (+) |
| G14344 | NA | other | upstream | 982516 | 5510757 ~ 5528619 (+) |
| G14187 | LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 | other | upstream | 1094000 | 4801340 ~ 5417135 (+) |
| G14209 | LOC102792843 | other | upstream | 1983758 | 4500173 ~ 4527377 (+) |
| G15019 | NA | other | downstream | 460959 | 6972845 ~ 6989396 (+) |
| G15173 | LOC102077075 | other | downstream | 886215 | 7398101 ~ 7399141 (+) |
| G15234 | NA | other | downstream | 979479 | 7491365 ~ 7492057 (+) |
| rffl | rffl | other | downstream | 1294923 | 7806809 ~ 7853429 (+) |
| LOC120543808 | NA | other | downstream | 1314724 | 7826610 ~ 7828087 (+) |
