G15012


Basic Information

Item Value
gene id G15012
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6944322 ~ 6991913 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU20157
CCAGTTTACAGCGTGTTTCCTGCAGCGAGCATTAAGATGCATTAAGGAAGAGACTCCGGAGGCGAGGCCATCACGGATAATGCTTCAGCAGCGGAAAGAAAAAGCTCTCTGCTTCCTGACAGTTTCTAAAGAGACCGTGAAACACATCAGAACcaaggagggagagacaaagagggagggagagagggagggagagagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagaccgacagaccgacagacagacacacaggaatgTTTTCATGTTGTGGTTGCAGGATTCCCTTCATTTAGTTTGTACAGTTAATAAAAAAGCTTAATGTTCAGGATTATTATGGTCTGTATTAAAGCTTCCCAGTTATGGAATATAAAATGCAAACAAGTCACCGAGCGGAAAGAGTCACATCCCTTTTGTCCAATCAACAGATAGCTTAAAAAaaccagaacacacacacacgttccctTTGAGCGCTCTCAGAGCAGTTAGTTTACGTTAAGGCGAGGCGTGTTTTCGTGGGGTTGTTGCTGTGACAACAtgactagagatgttccgataccgccTAAAATGCTTGTATCGCTATCGGAAAGTACCGATCCGACACCACGTCATTTAGCCCTGaacaaaatctactttaaaagtagtttatttaaagtTCGTTTCCGTTCGGACtcgctgtcaaactggataatacaacaacaacaaagacagCAATtacatcacatccatacagggataggaGTTCATTCACATTTTAACCAATGCTTTCCATGACTATGTATTCCTGAAAATGTAGATTATGTATATCCAAAAATCACACAAGTAGGCACACTTACGTTCCCCACACGCAAATTTGGCTGCCGACTGACTGTCAGGAAGCGTTGGCTGACATCCTCGCACGATGTAGAAGACTAGTGGGAGTTTGGGACTTTCCACGCCCACGGTACCTCGGCCCTTAATGCGTCTCGTCTAGTAACACTGGAGATGGTCCCTCGTCTCGTGCCTGGCGTCTGACTCGTGATGGAGGAACCTGCAATCGGCGTGACGTTGGTCGATGTCGATGGAGGAAAGAAGGagctagtgatggtcaaataaCACACCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20157 True 1134 lncRNA 0.47 2 6944322 6991913

Neighbor

gene id symbol gene type direction distance location
or55e1 LOC104939064 coding upstream 2888 6935046 ~ 6941434 (+)
LOC120543617 NA coding upstream 14737 6913684 ~ 6929585 (+)
LOC120545568 LOC102303044,LOC101479096 coding upstream 32832 6910543 ~ 6911490 (+)
LOC120545541 NA coding upstream 44740 6898638 ~ 6899582 (+)
LOC120545533 LOC101478539 coding upstream 49825 6893550 ~ 6894497 (+)
LOC120545619 abcf3 coding downstream 373883 7365796 ~ 7396634 (+)
trnal-cag NA coding downstream 419917 7411830 ~ 7411912 (+)
LOC120543955 NA coding downstream 439030 7430943 ~ 7440997 (+)
ece2b LOC103361209,LOC101485402 coding downstream 543186 7535099 ~ 7570718 (+)
ano7 ano7,LOC103361833,LOC108228741 coding downstream 581811 7573724 ~ 7603726 (+)
LOC120572178 NA non-coding upstream 253431 6690031 ~ 6690891 (+)
G14939 NA non-coding upstream 365869 6578222 ~ 6578453 (+)
G14930 NA non-coding upstream 432436 6511135 ~ 6511886 (+)
G14928 NA non-coding upstream 434348 6508571 ~ 6509974 (+)
G14917 NA non-coding upstream 449672 6494388 ~ 6494650 (+)
G15032 NA non-coding downstream 24882 7016795 ~ 7017311 (+)
G15050 NA non-coding downstream 60273 7052186 ~ 7053965 (+)
G15028 NA non-coding downstream 101215 7093128 ~ 7093466 (+)
G15063 NA non-coding downstream 104548 7096461 ~ 7099577 (+)
G15120 NA non-coding downstream 146664 7138577 ~ 7138781 (+)
spcs2 spcs2 other upstream 526813 6407985 ~ 6417509 (+)
rnf169 NA other upstream 539897 6393062 ~ 6404425 (+)
G14344 NA other upstream 1415703 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 1527187 4801340 ~ 5417135 (+)
G14209 LOC102792843 other upstream 2416945 4500173 ~ 4527377 (+)
G15173 LOC102077075 other downstream 406188 7398101 ~ 7399141 (+)
G15234 NA other downstream 499452 7491365 ~ 7492057 (+)
rffl rffl other downstream 814896 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 834697 7826610 ~ 7828087 (+)
LOC120543711 LOC102298536 other downstream 866140 7858053 ~ 7892473 (+)

Expression


Co-expression Network