G15063


Basic Information

Item Value
gene id G15063
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 7096461 ~ 7099577 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU20215
CAACAAGGCAGATATGACGTCATGCTGCACTTCCTGTCTGCTCTGTTCATCTAGTActaacaggcttttattttggtTTATGAGACATTaggagcttttattttggtggttCAATCCATCAATTATGAGACATtaggggcttttattttggtggttTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttCAATCCATCAGTTATGAGACATTaggagcttttattttggtggttCAATCCATCAATTATGAGACATtaagggcttttattttggtggttTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttCAATCCATCAGTTATGAGATATTaggagcttttattttggtggtaCAATCCATCAGTTATGAGGCATtaggggcttttattttggcagTACAACCCATCAATTATGAGACAttgggggcttttattttggtggtaCAATCCATCAGTTATGAGACATTAgtagcttttattttggtggttTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttCTATCCCTCAGTTATGAGACATTAgtagcttttattttggtggttAAATCCATCAGTTATGAGACATtaggggcttttattttggtggttCTATCCATCAGTTATGAGACAGtaggggcttttattttggtgtttttatccATCAGTTATGAGACATtaggggcttttattttggtggttCAATCCATCAGTTATGAGACATtaggggcttttattttggtggttAAATCCATCAGTTATGAGACATTAgtagcttttattttggtggttCAATCCATCAGTTATGAGACATtaggggcttttattttggtggttCAATCCATCAATTATGAGACATtaggggcttttattttggtggttCAATCCATCAATTATGAGACAGTAGGGGCTATTATTTTGGTGGTTTTATCCATCAGTTATGAGACATTAGGGTCTTTTATTTTGGTGGTTCAATCCATCAATTATGAGACAGTAGGGGCTATTATTTTGGTGGTTTTATCCATCAGTTATGAGATATtaggggcttttattttggtggttCAATCCATCAATTATGAGACAGtaggggcttttattttggtggttTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttCAATCCATCAATTATGAGACATtaggggcttttattttggtggttTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttTTATCCATCAGTTATGAGACAGTAGGGGCTATTATTTTGGTGGTTTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttCAATCCATTAGTTATGAGACATtaggggcttttattttggtggttTTATCCATCAGTTATGAGACATTAGGGGCTTTTATTTTTGTGGTTCAATCTATTAGTTATGAGACATtaggggcttttattttggtggtaCAATCCATCAGTTATGAGACATtaggggcttttattttggtggttCAACCCATCAGTTATGAGACATtaggggcttttattttggtggttCAACCCATCAGTTATGAGAAATtaggggcttttattttggtggttCAATCCATTAGTTATGAGACATtaggggcttttattttggtggttCAATCCATCAATTATGAGATATtaggggcttttattttggtggtaCAATCCATGAGTTATGAGACATtaggggcttttattttggtggttCAACCCATCAGTTATGAGACATtaggggcttttattttgtatgaaTTCTGCGGATAATTCTGTGTCCATAGATCCCGTGTTTCCATGGTTACGAGACGTAAGGACAAACAGGAAGAAGTCAGAAGTCCTGACAGCTAATAACTCATCTAATCTGAAGATTAaagttaaaacaataaaaccaaacCAAGCAGAAGAATATATATGTTCTATTTACATCTTCATGTTGAAATGTTCAGGAGATCTTCCAGCATTTAGGTTAATAAAACCATGGCAACACTCTCACAGGACTGTGTTTAGGCATCAAATATAAATACGatctttatttatgtttatatacTGGCAGCAAAACAACTAAAGTTTTTAAATAAAGTGACATAAACGacaaaaaaaagcgacaaaatgttgaaaaaagtgacaataaagtcTGAAAAAAGGCGACTAAAACGTGTGATTTTAAGCCAAACCATTTGTTTCTAGACTTAAGGACAGCCTGACTTCTAATTTAACGTGTTTACAGTTAACTGGAGGTTATTTAATATGCTTATATGTTTATGACGTAACTTCAGTATTTCTTTATATCTTTAGGTTTATAAAACACTCAGTATTTCCTCCCAGATGACCGATCCTCTAATGACAGAAAAGTAATCATTTAGAGTCTGTCGACCCCCGAAAAACTCCCCCAGATGGTTTGTTCCAGCATGATTCTGACCCAGAGCCCTCTATTGGCCGTAGCAGGTATTACGGaggaagggggcggggcttaaacACAGGAAGGGGCGGGGCTTCCCCTCTGTGTTCAGACTCAAAAGTGATTTAGATTCTGTCAGCTCTGATCTCTGATCTCAGATCTCGGATCAGTCCAGGAACACGTACATCTTCatcctcttcttcatcctcgTACAGACACCTTGGTCTCCATGGCGACCAGCATGGAGCGCAGCCGAGAGTTCTCATTGGCCAGCAGCTTGGACGGCTCGTCAAACTCCGCCACCTGAAACGATATCAAATCTAACTTTATGTAcgcacacaaatatacacacacacacacatatatacacacacacacacatatatacacacacacacacatatatacacacacacacacatatataca
>TU20216
CAACAAGGCAGATATGACGTCATGCTGCACTTCCTGTCTGCTCTGTTCATCTAGTActaacaggcttttattttggtTTATGAGACATTaggagcttttattttggtggttCAATCCATCAATTATGAGACATtaagggcttttattttggtggttTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttCAATCCATCAGTTATGAGATATTaggagcttttattttggtggtaCAATCCATCAGTTATGAGGCATtaggggcttttattttggtggttCAATCCATCAATTATGAGACATtaggggcttttattttggtggttTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttTTATCCATCAGTTATGAGACAGTAGGGGCTATTATTTTGGTGGTTTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttCAATCCATTAGTTATGAGACATtaggggcttttattttggtggttTTATCCATCAGTTATGAGACATTAGGGGCTTTTATTTTTGTGGTTCAATCTATTAGTTATGAGACATtaggggcttttattttggtggtaCAATCCATCAGTTATGAGACATtaggggcttttattttggtggttCAACCCATCAGTTATGAGACATtaggggcttttattttggtggttCAACCCATCAGTTATGAGAAATtaggggcttttattttggtggttCAATCCATTAGTTATGAGACATtaggggcttttattttggtggttCAATCCATCAATTATGAGATATtaggggcttttattttggtggtaCAATCCATGAGTTATGAGACATtaggggcttttattttggtggttCAACCCATCAGTTATGAGACATtaggggcttttattttgtatgaaTTCTGCGGATAATTCTGTGTCCATAGATCCCGTGTTTCCATGGTTACGAGACGTAAGGACAAACAGGAAGAAGTCAGAAGTCCTGACAGCTAATAACTCATCTAATCTGAAGATTAaagttaaaacaataaaaccaaacCAAGCAGAAGAATATATATGTTCTATTTACATCTTCATGTTGAAATGTTCAGGAGATCTTCCAGCATTTAGGTTAATAAAACCATGGCAACACTCTCACAGGACTGTGTTTAGGCATCAAATATAAATACGatctttatttatgtttatatacTGGCAGCAAAACAACTAAAGTTTTTAAATAAAGTGACATAAACGacaaaaaaaagcgacaaaatgttgaaaaaagtgacaataaagtcTGAAAAAAGGCGACTAAAACGTGTGATTTTAAGCCAAACCATTTGTTTCTAGACTTAAGGACAGCCTGACTTCTAATTTAACGTGTTTACAGTTAACTGGAGGTTATTTAATATGCTTATATGTTTATGACGTAACTTCAGTATTTCTTTATATCTTTAGGTTTATAAAACACTCAGTATTTCCTCCCAGATGACCGATCCTCTAATGACAGAAAAGTAATCATTTAGAGTCTGTCGACCCCCGAAAAACTCCCCCAGATGGTTTGTTCCAGCATGATTCTGACCCAGAGCCCTCTATTGGCCGTAGCAGGTATTACGGaggaagggggcggggcttaaacACAGGAAGGGGCGGGGCTTCCCCTCTGTGTTCAGACTCAAAAGTGATTTAGATTCTGTCAGCTCTGATCTCTGATCTCAGATCTCGGATCAGTCCAGGAACACGTACATCTTCatcctcttcttcatcctcgTACAGACACCTTGGTCTCCATGGCGACCAGCATGGAGCGCAGCCGAGAGTTCTCATTGGCCAGCAGCTTGGACGGCTCGTCAAACTCCGCCACCTGAAACGATATCAAATCTAACTTTATGTAcgcacacaaatatacacacacacacacatatatacacacacacacacatatatacacacacacacacatatatacacacacacacacatatataca
>TU20218
CAACAAGGCAGATATGACGTCATGCTGCACTTCCTGTCTGCTCTGTTCATCTAGTActaacaggcttttattttggtTTATGAGACATTaggagcttttattttggtggttCAATCCATCAATTATGAGACATtaagggcttttattttggtggttTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttCAATCCATCAGTTATGAGATATTaggagcttttattttggtggtaCAATCCATCAGTTATGAGGCATtaggggcttttattttggcagTACAACCCATCAATTATGAGACAttgggggcttttattttggtggtaCAATCCATCAGTTATGAGACATTAgtagcttttattttggtggttTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttCTATCCCTCAGTTATGAGACATTAgtagcttttattttggtggttAAATCCATCAGTTATGAGACATtaggggcttttattttggtggttCTATCCATCAGTTATGAGACAGtaggggcttttattttggtgtttttatccATCAGTTATGAGACATtaggggcttttattttggtggttCAATCCATCAGTTATGAGACATtaggggcttttattttggtggttAAATCCATCAGTTATGAGACATTAgtagcttttattttggtggttCAATCCATCAGTTATGAGACATtaggggcttttattttggtggttCAATCCATCAATTATGAGACATtaggggcttttattttggtggttCAATCCATCAATTATGAGACAGTAGGGGCTATTATTTTGGTGGTTTTATCCATCAGTTATGAGACATTAGGGTCTTTTATTTTGGTGGTTCAATCCATCAATTATGAGACAGTAGGGGCTATTATTTTGGTGGTTTTATCCATCAGTTATGAGATATtaggggcttttattttggtggttCAATCCATCAATTATGAGACAGtaggggcttttattttggtggttTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttCAATCCATCAATTATGAGACATtaggggcttttattttggtggttTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttTTATCCATCAGTTATGAGACAGTAGGGGCTATTATTTTGGTGGTTTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttTTATCCATCAGTTATGAGACATtaggggcttttattttggtggttCAATCCATTAGTTATGAGACATtaggggcttttattttggtggttTTATCCATCAGTTATGAGACATTAGGGGCTTTTATTTTTGTGGTTCAATCTATTAGTTATGAGACATtaggggcttttattttggtggtaCAATCCATCAGTTATGAGACATtaggggcttttattttggtggttCAACCCATCAGTTATGAGACATtaggggcttttattttggtggttCAACCCATCAGTTATGAGAAATtaggggcttttattttggtggttCAATCCATTAGTTATGAGACATtaggggcttttattttggtggttCAATCCATCAATTATGAGATATtaggggcttttattttggtggtaCAATCCATGAGTTATGAGACATtaggggcttttattttggtggttCAACCCATCAGTTATGAGACATtaggggcttttattttgtatgaaTTCTGCGGATAATTCTGTGTCCATAGATCCCGTGTTTCCATGGTTACGAGACGTAAGGACAAACAGGAAGAAGTCAGAAGTCCTGACAGCTAATAACTCATCTAATCTGAAGATTAaagttaaaacaataaaaccaaacCAAGCAGAAGAATATATATGTTCTATTTACATCTTCATGTTGAAATGTTCAGGAGATCTTCCAGCATTTAGGTTAATAAAACCATGGCAACACTCTCACAGGACTGTGTTTAGGCATCAAATATAAATACGatctttatttatgtttatatacTGGCAGCAAAACAACTAAAGTTTTTAAATAAAGTGACATAAACGacaaaaaaaagcgacaaaatgttgaaaaaagtgacaataaagtcTGAAAAAAGGCGACTAAAACGTGTGATTTTAAGCCAAACCATTTGTTTCTAGACTTAAGGACAGCCTGACTTCTAATTTAACGTGTTTACAGTTAACTGGAGGTTATTTAATATGCTTATATGTTTATGACGTAACTTCAGTATTTCTTTATATCTTTAGGTTTATAAAACACTCAGTATTTCCTCCCAGATGACCGATCCTCTAATGACAGAAAAGTAATCATTTAGAGTCTGTCGACCCCCGAAAAACTCCCCCAGATGGTTTGTTCCAGCATGATTCTGACCCAGAGCCCTCTATTGGCCGTAGCAGGTATTACGGaggaagggggcggggcttaaacACAGGAAGGGGCGGGGCTTCCCCTCTGTGTTCAGACTCAAAAGTGATTTAGATTCTGTCAGCTCTGATCTCTGATCTCAGATCTCGGATCAGTCCAGGAACACGTACATCTTCatcctcttcttcatcctcgTACAGACACCTTGGTCTCCATGGCGACCAGCATGGAGCGCAGCCGAGAGTTCTCATTGGCCAGCAGCTTGGACGGCTCGTCAAACTCCGCCACCTGAAACGATATCAAATCTAACTTTATGTAcgcacacaaatatacacacacacacacatatatacacacacacacacatatatacacacacacacacatatatacacacacacacacatatataca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20215 True 2983 lncRNA 0.37 2 7096461 7099577
TU20216 False 2038 lncRNA 0.49 3 7096461 7099577
TU20218 False 2803 lncRNA 0.40 2 7096461 7099577

Neighbor

gene id symbol gene type direction distance location
or55e1 LOC104939064 coding upstream 155027 6935046 ~ 6941434 (+)
LOC120543617 NA coding upstream 166876 6913684 ~ 6929585 (+)
LOC120545568 LOC102303044,LOC101479096 coding upstream 184971 6910543 ~ 6911490 (+)
LOC120545541 NA coding upstream 196879 6898638 ~ 6899582 (+)
LOC120545533 LOC101478539 coding upstream 201964 6893550 ~ 6894497 (+)
LOC120545619 abcf3 coding downstream 266219 7365796 ~ 7396634 (+)
trnal-cag NA coding downstream 312253 7411830 ~ 7411912 (+)
LOC120543955 NA coding downstream 331366 7430943 ~ 7440997 (+)
ece2b LOC103361209,LOC101485402 coding downstream 435522 7535099 ~ 7570718 (+)
ano7 ano7,LOC103361833,LOC108228741 coding downstream 474147 7573724 ~ 7603726 (+)
G15028 NA non-coding upstream 2995 7093128 ~ 7093466 (+)
G15050 NA non-coding upstream 42496 7052186 ~ 7053965 (+)
G15032 NA non-coding upstream 79150 7016795 ~ 7017311 (+)
G15012 NA non-coding upstream 104548 6944322 ~ 6991913 (+)
G15021 NA non-coding upstream 118356 6977799 ~ 6978105 (+)
G15120 NA non-coding downstream 39000 7138577 ~ 7138781 (+)
G15122 NA non-coding downstream 42298 7141875 ~ 7142167 (+)
G15123 LOC108250351 non-coding downstream 43195 7142772 ~ 7143613 (+)
G15124 NA non-coding downstream 57713 7157290 ~ 7157648 (+)
G15127 NA non-coding downstream 67801 7167378 ~ 7180052 (+)
G15019 NA other upstream 107065 6972845 ~ 6989396 (+)
spcs2 spcs2 other upstream 678952 6407985 ~ 6417509 (+)
rnf169 NA other upstream 692036 6393062 ~ 6404425 (+)
G14344 NA other upstream 1567842 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 1679326 4801340 ~ 5417135 (+)
G15173 LOC102077075 other downstream 298524 7398101 ~ 7399141 (+)
G15234 NA other downstream 391788 7491365 ~ 7492057 (+)
rffl rffl other downstream 707232 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 727033 7826610 ~ 7828087 (+)
LOC120543711 LOC102298536 other downstream 758476 7858053 ~ 7892473 (+)

Expression


Co-expression Network