G15074


Basic Information

Item Value
gene id G15074
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6887216 ~ 6991918 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU20236
aTCAATCGGTGTGttatttgaccatcactagctCCTTCTTTCCTCCATCGACATCGACCAACGTCACGCCGATTGCAGGTTCCTCCATCACGAGTCAGACGCCAGGCACGAGACGAGGGACCATCTCCAGTGTTACTAGACGAGACGCATTAAGGGCCGAGGTACCGTGGGCGTGGAAAGTCCCAAACTCCCACTAGTCTTCTACATCGTGCGAGGATGTCAGCCAACGCTTCCTGACAGTCAGTCGGCAGCCAAATTTGCGTGTGGGGAACGTAAGTGTGCCTACTTGTGTGATTTTTGGATATACATAATCTACATTTTCAGGAATACATAGTCATGGAAAGCATTGGTTAAAATGTGAATGAACtcctatccctgtatggatgtgatgtaATTGctgtctttgttgttgttgtattatccagtttgacagcgaGTCCGAACGGAAACGAactttaaataaactacttttaaagtagattttgttCAGGGCTAAATGACGTGGTGTCGGATCGGTACTTTCCGATAGCGATACAAGCATTTTAggcggtatcggaacatctctagtcaTGTTGTCACAGCAACAACCCCACGAAAACACGCCTCGCCTTAACGTAAACTAACTGCTCTGAGAGCGCTCAAagggaacgtgtgtgtgtgttctggttTTTTTAAGCTATCTGTTGATTGGACAAAAGGGATGTGACTCTTTCCGCTCGGTGACTTGTTTGCATTTTATATTCCATAACTGGGAAGCTTTAATACAGACCATAATAATCCTGAACATTAAGCTTTTTTATTAACTGTACAAACTAAATGAAGGGAATCCTGCAACCACAACATGAAAAcattcctgtgtgtctgtctgtcggtctgtcggtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctctctccctccctctctccctccctctttgtctctccctccttgGTTCTGATGTGTTTCACGGTCTCTTTAGAAACTGTCAGGAAGCAGAGAGCTTTTTCTTTCCGCTGCTGAAGCATTATCCGTGATGGCCTCGCCTCCGGAGTCTCTTCCTTAATGC
>TU20238
aTCAATCGGTGTGttatttgaccatcactagctCCTTCTTTCCTCCATCGACATCGACCAACGTCACGCCGATTGCAGGTTCCTCCATCACGAGTCAGACGCCAGGCACGAGACGAGGGACCATCTCCAGTGTTACTAGACGAGACGCATTAAGGGCCGAGGTACCGTGGGCGTGGAAAGTCCCAAACTCCCACTAGTCTTCTACATCGTGCGAGGATGTCAGCCAACGCTTCCTGACAGTCAGTCGGCAGCCAAATTTGCGTGTGGGGAACGTAAGTGTGCCTACTTGTGTGATTTTTGGATATACATAATCTACATTTTCAGGAATACATAGTCATGGAAAGCATTGGTTAAAATGTGAATGAACtcctatccctgtatggatgtgatgtaATTGctgtctttgttgttgttgtattatccagtttgacagcgaGTCCGAACGGAAACGAactttaaataaactacttttaaagtagattttgttCAGGGCTAAATGACGTGGTGTCGGATCGGTACTTTCCGATAGCGATACAAGCATTTTAggcggtatcggaacatctctagtcaTGTTGTCACAGCAACAACCCCACGAAAACACGCCTCGCCTTAACGTAAACTAACTGCTCTGAGAGCGCTCAAagggaacgtgtgtgtgtgttctggttTTTTTAAGCTATCTGTTGATTGGACAAAAGGGATGTGACTCTTTCCGCTCGGTGACTTGTTTGCATTTTATATTCCATAACTGGGAAGCTTTAATACAGACCATAATAATCCTGAACATTAAGCTTTTTTATTAACTGTACAAACTAAATGAAGGGAATCCTGCAACCACAACATGAAAAcattcctgtgtgtctgtctgtcggtctgtcggtctgtctgtctgtctgtcggtctgtctgtctgtctgtctgtctgtatctgtgtgtgtgtgtCTCTGTCTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20236 True 1101 lncRNA 0.46 2 6944360 6991918
TU20238 False 952 lncRNA 0.45 3 6887216 6991918

Neighbor

gene id symbol gene type direction distance location
LOC120545524 NA coding downstream 2740 6882361 ~ 6884476 (-)
LOC120545509 NA coding downstream 64986 6820147 ~ 6822230 (-)
LOC120545506 LOC101478264,LOC104929709,LOC102796112 coding downstream 107112 6779175 ~ 6780104 (-)
LOC120545488 NA coding downstream 135235 6746180 ~ 6751981 (-)
LOC120545387 NA coding downstream 340199 6546091 ~ 6547017 (-)
wdr62 NA coding upstream 44204 7036122 ~ 7059696 (-)
LOC120554469 NA coding upstream 50164 7042082 ~ 7042373 (-)
LOC120544032 NA coding upstream 271056 7262974 ~ 7267714 (-)
LOC120543849 NA coding upstream 406275 7398193 ~ 7412507 (-)
polr2d polr2d coding upstream 503115 7495033 ~ 7509145 (-)
LOC120549739 NA non-coding downstream 83595 6802892 ~ 6803621 (-)
G14949 NA non-coding downstream 180923 6705589 ~ 6706293 (-)
G14943 NA non-coding downstream 278004 6608957 ~ 6609212 (-)
G14940 NA non-coding downstream 308755 6578238 ~ 6578461 (-)
G14937 NA non-coding downstream 320408 6566537 ~ 6566808 (-)
G15083 NA non-coding upstream 4213 6996131 ~ 6997391 (-)
G15091 NA non-coding upstream 24378 7016296 ~ 7017402 (-)
G15086 NA non-coding upstream 42446 7034364 ~ 7034716 (-)
G15094 NA non-coding upstream 43155 7035073 ~ 7035526 (-)
G15097 NA non-coding upstream 44760 7036678 ~ 7037528 (-)
pgm2l1 pgm2l1 other downstream 506760 6359243 ~ 6380456 (-)
G14853 NA other downstream 584404 6302349 ~ 6302812 (-)
G14754 NA other downstream 1181239 5703387 ~ 5705977 (-)
col4a4 LOC104946957 other downstream 1248016 5555474 ~ 5639200 (-)
G14722 NA other downstream 1353389 5510521 ~ 5533827 (-)
atg16l2 NA other upstream 29052 7020970 ~ 7032540 (-)
G15110 NA other upstream 110448 7102366 ~ 7104090 (-)
G15114 abcc5 other upstream 119781 7111699 ~ 7113608 (-)
LOC120543742 abcc5 other upstream 122801 7114719 ~ 7126398 (-)
rpl35a rpl35a other upstream 137708 7129626 ~ 7136162 (-)

Expression


Co-expression Network