G15174


Basic Information

Item Value
gene id G15174
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 7400765 ~ 7402776 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU20404
CGTATGGTGGGTGATCTCCAGACAGAAGGCCGGGTCCTGCCTGCAGGCCTCCTCCACCGTACGCTGCCGGTGTTTGTACGGACACTTGACCTCCAGGCAGAGCAGCCATTGGCCGGTGTGGCTGTCCGTCACGATGCCGTCGGGACTCCCAGCCAACCAGGGGCGCCGCTCGTCCAGGAACAAACCGCAGGACTGCACGGTGACGGACCGGCCCAGCGCCACGCTCTTCATCTCCTGCAggaacatcatcatcatcatcatgcttctgactggctagtagtccttacctaggtactgtcagggcccgccctcaaactctgcttctgattggctagtagtccttacctaggtactgtcaggacctcatactctgcttctgattggctagtagtccttacctaggtactgtcagggcacgccctcatactctgcttctgactggctagtagtccttaccgaggtactgtcagggcacgccctcatactctgcttctgactggctagtagtccttacctaggtactgtcaggacctcatactctgcttctgattggctagtagtccttacctaggtactgtcaggacctcatactctgcttctgactggctagtagtccttacctaggtactgtcaggaactcatactctgcttctgactggctagtagtccttacctaggtactgtcaggacctcatactctgcttctgactggctagtagtccttacctaggtactgtcagggcacgcccacatactctgcttctgactggctagtagtccttacctagctactgagcatgtgtgactgacaacaaagatgttacagaagtgagatgtctcactctgtagctaaaacagagacctgaacacagggtgaaaagaggagctgcagcaatgtgcagtacaacaaaaatgtgttttttgataattaaaccatgtaaacctattctgatataacctttaaatacagttatgaacctgaaaataagcagaatatgggcactttaagtagtTTAACGACAAAACGacaaaaagttgtaaaaagacagtgttgttgttgctgttttcaacggttttgtagctttttcagaAGTCAGTGTTGGATGGTCAGGTGTGACAGCAGGTGTGACATCAGGTGTGCAGGTGTACCTGATACCTGCGGACCGCCTTGGCCTCCATGTTGACCCCCCAGGACATGGCTCTGGTCTGGATGTGCCGCCCCTCACCTGTCCAGTCACAGGGAAGGGAAGAAGAACAGTCAGTCTAACtttaataactttattaatCTGTTATCTAGCAAGGGGCGGAGCTTCTGGGGCTCACCTGGCTTACCTGTGACAGCAGCCAGGTaggaagggggcggggcttaccTGTGACAGCAGCCATGTaggaagggggcggggcttaccTGTGACTGCAGCCAGGTAGGAAGGGGGCGGGGCCTTGCTCTTGCCGTTGACGAAGCGGCAGTGAGCGATGCGGTGAGCCACTGAGGCCGTGATGCGGTTCTTCCTCCAGGTGAACCAGTCCTGGTTGCTGCTCTGTCCGCGGGTAAGAATCTCCACCTGCTGCACCACCTGGTGGTCCACCTGCAGACCCAGACCCAGAGGAACCTGGTCCGGGCTCAGGGAGGCCCGGTCTGGGCCCGCATCGGCATCTGGACCAGGGGggggaagaagtactcagattaggcaaggcagctttatttgtagagcacatttcagcaacagggcaattcaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20404 True 1742 lncRNA 0.50 3 7400765 7402776

Neighbor

gene id symbol gene type direction distance location
LOC120545619 abcf3 coding upstream 4131 7365796 ~ 7396634 (+)
or55e1 LOC104939064 coding upstream 459331 6935046 ~ 6941434 (+)
LOC120543617 NA coding upstream 471180 6913684 ~ 6929585 (+)
LOC120545568 LOC102303044,LOC101479096 coding upstream 489275 6910543 ~ 6911490 (+)
LOC120545541 NA coding upstream 501183 6898638 ~ 6899582 (+)
trnal-cag NA coding downstream 9054 7411830 ~ 7411912 (+)
LOC120543955 NA coding downstream 28167 7430943 ~ 7440997 (+)
ece2b LOC103361209,LOC101485402 coding downstream 132323 7535099 ~ 7570718 (+)
ano7 ano7,LOC103361833,LOC108228741 coding downstream 170948 7573724 ~ 7603726 (+)
LOC120551040 NA coding downstream 209472 7612248 ~ 7640011 (+)
G15171 NA non-coding upstream 8455 7391413 ~ 7392310 (+)
LOC120544109 NA non-coding upstream 12083 7382638 ~ 7388682 (+)
G15156 NA non-coding upstream 39556 7326575 ~ 7361209 (+)
G15162 lrch3 non-coding upstream 44208 7354998 ~ 7356557 (+)
G15144 NA non-coding upstream 71546 7309629 ~ 7329219 (+)
G15179 NA non-coding downstream 22664 7425440 ~ 7459538 (+)
G15236 NA non-coding downstream 92284 7495060 ~ 7541926 (+)
G15243 NA non-coding downstream 264366 7667142 ~ 7745991 (+)
G15262 NA non-coding downstream 376481 7779257 ~ 7800890 (+)
G15267 NA non-coding downstream 380992 7783768 ~ 7839409 (+)
G15173 LOC102077075 other upstream 1624 7398101 ~ 7399141 (+)
G15019 NA other upstream 411369 6972845 ~ 6989396 (+)
spcs2 spcs2 other upstream 983256 6407985 ~ 6417509 (+)
rnf169 NA other upstream 996340 6393062 ~ 6404425 (+)
G14344 NA other upstream 1872146 5510757 ~ 5528619 (+)
G15234 NA other downstream 88589 7491365 ~ 7492057 (+)
rffl rffl other downstream 404033 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 423834 7826610 ~ 7828087 (+)
LOC120543711 LOC102298536 other downstream 455277 7858053 ~ 7892473 (+)
G15415 NA other downstream 767920 8170696 ~ 8172491 (+)

Expression


Co-expression Network