LOC120544114


Basic Information

Item Value
gene id LOC120544114
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 7207735 ~ 7211366 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU20443
ATGACTCAAAATGTGAAGTGGAAATGGCGCTGTTGAAGTGGTTTACCGGCGCACGTGACCGTGGAGGGGAGAGGGCTGCAAGAGcccaaagagaaaaaggagcgTCCACCACACAGACGCTGAAAAGACTCTTGCCATCCCATTCCCTTTCAACTCCGTTCCACTTTTTCAAGGAGGCTTTTGCTATCTGCTGCCTGACCACGCCCACCTCACCTGTTGCCTATAAATTGATTGTGAACCCTTTGGCTCATTCTTTGCTCACTCTGCCGGCACTCCAATGCAACCTGTCACACAGTAACTGCAATGAATCCACGTCACTCTGAATGATAAATAAAATACCACTGGTGCTGCATTGAACCCTG
>XR_005636457.1
AGCCTGCATGCCTCACTCCAGGGTGTGGAATCCGCAACACTGGTGCACTGAAGAGTAATGCAATGACTCAAAATGTGAAGTGGAAATGGCGCTGTTGAAGTGGTTTACCGGCGCACGTGACCGTGGAGGGGAGAGGGCTGCAAGAGcccaaagagaaaaaggagcgTCCACCACACAGACGCTGAAAAGACTCTTGCCATCCCATTCCCTTTCAACTCCGTTCCACTTTTTCAAGGAGGCTTTTGCTATCTGCTGCCTGACCACGCCCACCTCACCTGTTGCCTATAAATTGATTGTGAACCCTTTGGCTCATTCTTTGCTCACTCTGCCGGCACTCCAATGCAACCTGTCACACAGTAACTGCAATGAATCCACGTCACTCTGAATGATAAATAAAATACCACTGGTGCTGCATTGAA
>XR_005636458.1
CTGTGACTTCAAGGAGAACTTCTATcagacattcacaaattgagGTGCACTGAAGAGTAATGCAATGACTCAAAATGTGAAGTGGAAATGGCGCTGTTGAAGTGGTTTACCGGCGCACGTGACCGTGGAGGGGAGAGGGCTGCAAGAGcccaaagagaaaaaggagcgTCCACCACACAGACGCTGAAAAGACTCTTGCCATCCCATTCCCTTTCAACTCCGTTCCACTTTTTCAAGGAGGCTTTTGCTATCTGCTGCCTGACCACGCCCACCTCACCTGTTGCCTATAAATTGATTGTGAACCCTTTGGCTCATTCTTTGCTCACTCTGCCGGCACTCCAATGCAACCTGTCACACAGTAACTGCAATGAATCCACGTCACTCTGAATGATAAATAAAATACCACTGGTGCTGCATTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20443 False 362 TUCP 0.58 2 7207735 7208291
XR_005636457.1 False 419 lncRNA 0.50 3 7207740 7208728
XR_005636458.1 True 421 lncRNA 0.48 3 7207740 7211366

Neighbor

gene id symbol gene type direction distance location
wdr62 NA coding downstream 148039 7036122 ~ 7059696 (-)
LOC120554469 NA coding downstream 165362 7042082 ~ 7042373 (-)
LOC120545524 NA coding downstream 323259 6882361 ~ 6884476 (-)
LOC120545509 NA coding downstream 385505 6820147 ~ 6822230 (-)
LOC120545506 LOC101478264,LOC104929709,LOC102796112 coding downstream 427631 6779175 ~ 6780104 (-)
LOC120544032 NA coding upstream 51608 7262974 ~ 7267714 (-)
LOC120543849 NA coding upstream 186827 7398193 ~ 7412507 (-)
polr2d polr2d coding upstream 283667 7495033 ~ 7509145 (-)
trnag-ucc NA coding upstream 298634 7510000 ~ 7510071 (-)
LOC120551046 LOC106510929 coding upstream 501286 7712652 ~ 7715037 (-)
G15190 NA non-coding downstream 65543 7141596 ~ 7142192 (-)
G15112 NA non-coding downstream 97039 7110045 ~ 7110696 (-)
G15111 NA non-coding downstream 102602 7104837 ~ 7105133 (-)
G15109 NA non-coding downstream 105650 7096459 ~ 7102085 (-)
G15108 NA non-coding downstream 113399 7082808 ~ 7094336 (-)
G15209 NA non-coding upstream 116330 7327696 ~ 7330920 (-)
G15211 NA non-coding upstream 134292 7345658 ~ 7419047 (-)
G15212 lrch3 non-coding upstream 143438 7354804 ~ 7356508 (-)
G15226 NA non-coding upstream 234792 7446158 ~ 7461790 (-)
G15227 NA non-coding upstream 235335 7446701 ~ 7459539 (-)
LOC120543599 LOC102193948,LOC103360213,LOC102310147,LOC107834023,LOC106944350,LOC103473932 other downstream 8196 7142729 ~ 7199539 (-)
rpl35a rpl35a other downstream 71573 7129626 ~ 7136162 (-)
LOC120543742 abcc5 other downstream 81337 7114719 ~ 7126398 (-)
G15114 abcc5 other downstream 94127 7111699 ~ 7113608 (-)
G15110 NA other downstream 103645 7102366 ~ 7104090 (-)
lrch3 lrch3 other upstream 98548 7309914 ~ 7343893 (-)
trnaa-cgc NA other upstream 724890 7936256 ~ 7936327 (-)
LOC120551075 LOC103475274,LOC105922519 other upstream 925935 8137301 ~ 8155303 (-)
G15757 NA other upstream 1256991 8468357 ~ 8469760 (-)
G15771 NA other upstream 1390551 8601917 ~ 8656963 (-)

Expression


Co-expression Network