Gene
RNA
| Item | Value |
|---|---|
| gene id | G15212 |
| gene name | lrch3 |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 7354804 ~ 7356508 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| lrch3 | Predicted to be active in cytosol. Orthologous to human LRCH3 (leucine rich repeats and calponin homology domain containing 3). |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and calponin homology domain-containing protein 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU20463 | True | 466 | lncRNA | 0.51 | 2 | 7354804 | 7356508 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120544032 | NA | coding | downstream | 87090 | 7262974 ~ 7267714 (-) |
| wdr62 | NA | coding | downstream | 295108 | 7036122 ~ 7059696 (-) |
| LOC120554469 | NA | coding | downstream | 312431 | 7042082 ~ 7042373 (-) |
| LOC120545524 | NA | coding | downstream | 470328 | 6882361 ~ 6884476 (-) |
| LOC120545509 | NA | coding | downstream | 532574 | 6820147 ~ 6822230 (-) |
| LOC120543849 | NA | coding | upstream | 41685 | 7398193 ~ 7412507 (-) |
| polr2d | polr2d | coding | upstream | 138525 | 7495033 ~ 7509145 (-) |
| trnag-ucc | NA | coding | upstream | 153492 | 7510000 ~ 7510071 (-) |
| LOC120551046 | LOC106510929 | coding | upstream | 356144 | 7712652 ~ 7715037 (-) |
| LOC120551059 | NA | coding | upstream | 626586 | 7983094 ~ 7986427 (-) |
| G15209 | NA | non-coding | downstream | 23884 | 7327696 ~ 7330920 (-) |
| G15190 | NA | non-coding | downstream | 212612 | 7141596 ~ 7142192 (-) |
| G15112 | NA | non-coding | downstream | 244108 | 7110045 ~ 7110696 (-) |
| G15111 | NA | non-coding | downstream | 249671 | 7104837 ~ 7105133 (-) |
| G15109 | NA | non-coding | downstream | 252719 | 7096459 ~ 7102085 (-) |
| G15226 | NA | non-coding | upstream | 89650 | 7446158 ~ 7461790 (-) |
| G15227 | NA | non-coding | upstream | 90193 | 7446701 ~ 7459539 (-) |
| G15235 | NA | non-coding | upstream | 134878 | 7491386 ~ 7492016 (-) |
| G15300 | NA | non-coding | upstream | 141517 | 7498025 ~ 7498806 (-) |
| G15301 | NA | non-coding | upstream | 149439 | 7505947 ~ 7572179 (-) |
| lrch3 | lrch3 | other | downstream | 10911 | 7309914 ~ 7343893 (-) |
| LOC120544114 | NA | other | downstream | 143438 | 7207735 ~ 7211366 (-) |
| LOC120543599 | LOC102193948,LOC103360213,LOC102310147,LOC107834023,LOC106944350,LOC103473932 | other | downstream | 155265 | 7142729 ~ 7199539 (-) |
| rpl35a | rpl35a | other | downstream | 218642 | 7129626 ~ 7136162 (-) |
| LOC120543742 | abcc5 | other | downstream | 228406 | 7114719 ~ 7126398 (-) |
| trnaa-cgc | NA | other | upstream | 579748 | 7936256 ~ 7936327 (-) |
| LOC120551075 | LOC103475274,LOC105922519 | other | upstream | 780793 | 8137301 ~ 8155303 (-) |
| G15757 | NA | other | upstream | 1111849 | 8468357 ~ 8469760 (-) |
| G15771 | NA | other | upstream | 1245409 | 8601917 ~ 8656963 (-) |
| LOC120544569 | dgkd,LOC102780004 | other | upstream | 1335566 | 8692074 ~ 8742123 (-) |
