LOC120543711 (LOC102298536)


Basic Information

Item Value
gene id LOC120543711
gene name LOC102298536
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 7858053 ~ 7892473 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU20556
GCTGGGAATCAGCCCTGATGGACAGCACCTGGCAGCTGGAGACCGCTGTGGAAACCTGCGtaTCTTTGGTCTGGCGTTCCTGGATGAGTTGGTGAAGATCGAGGCTCATGACTCGGAGGTTTTGTGTCTGGAGTTTTCCCCGACATCCACAGGTGTGAACTTGTTGGCGTCGGCCAGCAGAGATCGACTGATTCACGTCTTCAACCTGGAGAAGAACTACAGTCTGGAACAAACTCTCAGCGACCACTCAGCCTCCATCACTGCAGTCAAGTTCaccgGCGAGAGTCCCGAGGTCCGACTCGTGAGCTGCGGCGCCGATAAAAGCATCTACTTCCAGACAGCCGAGCAGtctgtggAGGGAcacaccaagaaccagaatcacatttctttagtgtgatattagatgtgagaagaaggaaatggttctaacattggtctttag
>XM_039776883.1
CGCCCGCTGAAGAGAAGAGTGTCAGGTTTCCTAAAAGCTGAAATAGTCCTCCATCATTATCATCACAAACTGTCCCGTTTCTGGTTCACATCAGCGGGCGTTTATGGACCGACACCGCGGTGTTTACACGGTTATTGTCTCGGATTGTAGCGGCGTAGTTGTATCTTTCCGGATAACCgtttaaaagttaaaataaagcGGTGTGTTGTTATCATGGCGGAGGGAGCGGACAGCGGGTCAGTCAACACCGCGAAGAGGAAACAACCAGCGGGGAGAAGGAGCCGCCAGAGCCGCAGCAAAACCTCCAGCAGCCGGGTGACTCTAGAGAAAGTTTTGGGTATCAGCACAGCCAACAGCAGcggtctgacctctgaccccaaatCTGGGCTCATCGCCTATCCTGCAGggtgtgTCATCGTGTTGCTCCACCCGAAGAACAACAAACAGACTCACATCATCAACACGTCCAGGAAGCCGTTCAGCGCGCTGGCGTTCTCCCACGATGGAAAACACCTGGTGACTGGCGAGaGTGGTCACATgccctgtgtgcgtgtgtgggagGTGGATGGAGGGGGGAGTCAGGTGGCCGAGGTCCAGTGTCATAAATACGGAGTTTCCTGCGTGGCGTTCTCCACCAACAGCTGCTACATCGTCTCCGTGGGATACCAACACGACATGACCGTCAGTGTTTGGGACTGGAGGAAAGGGTTGATCATAGCCTCCAACAAGGTGTCCAGCCGAGTGCTGGCCGTCTCCTTCTCTCAGGACAACAGCTACTTCGTCACCGCGGGCAACCGACACGTCAAGTTCTGGTTCCTGGACGCCTCCAAAGAACGCCGGGTGAACAGCACGGtgcctctgattggtcggtcTGGGTTGCTAGGCGACCATAAGAACAGCGTGTTCAGCGGGGTGGCGTGTGGGCGTGGCCTCACGGCGTCCAAAACCTTCTGCATCACCAGCTCCGGTCTGCTGTGTCTGTTCAACAGCAACAGGCATCTGGAGGCCTGGGTCCACCTCAagacGGCGTCGGCGAGCTGTCTGGCGGTCAGTAAGGACTTCCTGTTCTGTGGCTGCGCTGACGGAGCCGTCCGGGTGTTCAGCCCGTCCAACCTGCAGTACATCAGCACGCTGCAGCGGCCGCACCGCCTGGGGGTGGACCTGGCCCAGAGTACACAGCACGGCGACCTGCTCCCGGCCAGCCCCGGTGCTCAGTACCCCGACACGCTGgcggtgacctttgacccctcctCCAGACACCTGACCTGTGTGTACAACGACCACAGCGTGTACGTGTGGGACGTCCGAGACGTGAGGAACGCCACCAAGCTGTACTCGGCTCTGTACCACAGCAGCTGCGTCTGGAGCGTCGAGgTGTATCCCGAGCTGCCGGATGCCTCTCGGGCCTGTctgcctccctcctccttcctcaccTGTTCCTCCGATAACACCATCAGGCTGTGGCACGCTGACCCCCCCACCGGCCACAGGAACCTCTACAGCAACGACCTGCTGAGGATCCTGTACGTGGGGGAGGACACGCAGCACCTGCAGGccgagggggagaggggggagtgGGGGGAGGCCGCCGGGGCTGATGGGAAGGCTGGGATCAGAGTGCTGGGAATCAGCCCTGATGGACAGCACCTGGCAGCTGGAGACCGCTGTGGAAACCTGCGtaTCTTTGGTCTGGCGTTCCTGGATGAGTTGGTGAAGATCGAGGCTCATGACTCGGAGGTTTTGTGTCTGGAGTTTTCCCCGACATCCACAGGTGTGAACTTGTTGGCGTCGGCCAGCAGAGATCGACTGATTCACGTCTTCAACCTGGAGAAGAACTACAGTCTGGAACAAACTCTCAGCGACCACTCAGCCTCCATCACTGCAGTCAAGTTCaccgGCGAGAGTCCCGAGGTCCGACTCGTGAGCTGCGGCGCCGATAAAAGCATCTACTTCCAGACAGCCGAGCAG

Function

NR:

description
PREDICTED: mitogen-activated protein kinase-binding protein 1-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20556 False 442 lncRNA 0.48 5 7882202 7892473
XM_039776883.1 True 1968 mRNA 0.59 14 7858053 7886305

Neighbor

gene id symbol gene type direction distance location
LOC120543651 NA coding upstream 166981 7679029 ~ 7691072 (+)
eif4h eif4h,LOC102797691 coding upstream 192903 7642554 ~ 7665150 (+)
LOC120551040 NA coding upstream 218042 7612248 ~ 7640011 (+)
ano7 ano7,LOC103361833,LOC108228741 coding upstream 254327 7573724 ~ 7603726 (+)
ece2b LOC103361209,LOC101485402 coding upstream 287335 7535099 ~ 7570718 (+)
LOC120551067 NA coding downstream 222912 8115385 ~ 8118646 (+)
LOC120543907 NA coding downstream 231152 8123625 ~ 8125669 (+)
LOC120551081 NA coding downstream 352158 8244631 ~ 8307210 (+)
nyap2a LOC103360223 coding downstream 506927 8399400 ~ 8422336 (+)
LOC120543718 NA coding downstream 536752 8429225 ~ 8469760 (+)
G15265 NA non-coding upstream 862 7853527 ~ 7857191 (+)
G15273 NA non-coding upstream 18059 7839469 ~ 7839994 (+)
G15267 NA non-coding upstream 18644 7783768 ~ 7839409 (+)
G15266 NA non-coding upstream 22135 7835175 ~ 7835918 (+)
G15262 NA non-coding upstream 57163 7779257 ~ 7800890 (+)
G15372 NA non-coding downstream 92462 7984935 ~ 7999507 (+)
G15378 NA non-coding downstream 136668 8029141 ~ 8129061 (+)
G15408 NA non-coding downstream 245029 8137502 ~ 8154585 (+)
G15417 NA non-coding downstream 280191 8172664 ~ 8173812 (+)
G15421 NA non-coding downstream 320720 8213193 ~ 8213969 (+)
rffl rffl other upstream 4624 7806809 ~ 7853429 (+)
LOC120543808 NA other upstream 29966 7826610 ~ 7828087 (+)
G15234 NA other upstream 365996 7491365 ~ 7492057 (+)
G15173 LOC102077075 other upstream 458912 7398101 ~ 7399141 (+)
G15019 NA other upstream 868657 6972845 ~ 6989396 (+)
G15415 NA other downstream 278223 8170696 ~ 8172491 (+)
LOC120543817 LOC104967478 other downstream 659118 8551591 ~ 8621654 (+)
LOC120544007 LOC106595375,LOC106565963,LOC106611916,LOC106588692,LOC106572435,LOC106612550,LOC106583987,LOC103477372 other downstream 903597 8796070 ~ 8808975 (+)
G15525 NA other downstream 957028 8849501 ~ 8850871 (+)
LOC120543609 LOC108250351,LOC108250349 other downstream 1014257 8906730 ~ 9098564 (+)

Expression


Co-expression Network