G15316


Basic Information

Item Value
gene id G15316
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 7569982 ~ 7637023 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU20627
tgcagGGTGGGTTTTGCCCGCTGTAGTTGCGTGGTGATGTTGCCAGGGTGAAGTTGATGAAGCCGCTGAGTGTGCTGTCTCTTGTGTAGCCGTAGTACAGGCGAGGCAGGAAGGACGACGTGAACGCTATGAGGAATgcctggaaacacacacacgcacacgcacacacacacacacacacacacacacacacacacacacacacacacacaaaacatctttGGCAGGAAGCAGCTTCTTCTGCTGAACAAATGACGACACACACAGGAGCTGCACGGGATTGGACAGCAGTGGCTTcaggaggagacacacacacactcatgctcaCTCCCTCACACGATCACATGCTcactcgctcacacacacgctCGCACACACACTCGCGCACACACGCCACAGTGATGTCAGAGAGTGCGTTCattcaacaaacacacaaacgacCCAAGGcccattaatattaataacaataacaataataacggTGATAAAGCAGAAATCAGTGACATTGTCCCATagcttcatcttcatcatcggTCCTTCGTGTCTCTGTGAAGTCCACTGAGTCCGTTTAGTTTAGTTtccagacaggaagtcagtctGATCGTCTCCACCGAACAACGTTAATAAACCTGCAACATCCCATAATAACCTCCATATAAACTCCTCTAAGTAAGACACTAACCAGCCGGCTAAGCAAGGAACATTTCTGTCCGGTAACAGTCTGACTAAACGACAGGCAGGTTTCCAACCTGACACCCAGAGCGGTTTCTTAAAAGGAGACCTGTTATAAACAGTTTCCAGCTTCATACGTAGCTTGTGTTTCTTCTTGAACATGTTTAGGGGCAGAGACAGAAGATGTAAACATTAAAAGGCTCTGCCCACAGCTAGGCAGAGATATATGAACTGTTGTTTAAGTCAATCACAGATCATCTAaaaatctgtacatcatttggAAAAAACATGTTGTCGAAGAAAAGATTAATCCTGTATACAGACGACATCCTGTTTAATATCTAAAAAACATGTTGGCGAAAAAAAGATTCATCTTGTATACAGACGACATCCTGGTTTATATCTAAAAACATGTTGGCGAAAAAAAGATTCATCCTGTATACAGACGACATCCTGTTTTATATCTAAAAACATGTTGGCGAAAAAAAGATTCATCCTGTATACAGACGACATcctgttttatatttaaaaacatgttggcAAAAAAAAGAGTCATCCTGTATACAGACAACATCCTGTTTTATATCTCACTGCTTttttgagtttaggaaaagaacaacggggttggctttaggaaacgtgacacgcgggacatgatctgcggtctcctgggtgaaagtcctgtgtttgacccgtCCTCCActccgaccaacctccctacgcagattttcaccctttcatactactctctacggcgtcaattcacacgcaattgcaaggtaatgtaagtcaatggaggccaaacagcaTTGAttaacacgctaaaaagcaagtatgtgtcttgataacacggcaataatggcatacgaattggagtgtcatacatacgccatttCATGAGATCCGTCTGAACTATGAGGTTTTGgctcacagggatttctttTAAATACGTTTACGtcattatttgaagctttggTGTTTTAATGTTTGACACAAACATCCGAGATTGTAACATTACAGAAACACTAATATAAGAAAtatctgtgtaataacagttgTATGACTGTATATTTAACtagaaaaaactttaaaaaaaaggtgacaaatgtaaaaaaaaaaaagcttcaaaaagtgagcgagaaaaaaaaaagtgacaaaaacattgcctAAAATTCACAGGGATTTGAAGCTGTGGCGTTTTAATGTTTAACATCTGAGATTGTAACATAgatatgaaagaaaaaacagaaacttgTAACAGGTCTCCTTTAACAGACTGAGCGAATAGGCCCAACCCCGTCCCCCCCCTGCGATTGGCCGGTGTGTCTACCAGACCTCGCAGCGCTGCCCTGTGTTCATTGGCGTCCCCTCGGGACAGTTGAAGTGGCGGCTGAAGTCTGGAGAGTTGGCGAGTGTGCCGATGACTCGGTACCGCGGCGGGCTGTGGGGGTCGGTCATCAGACCCTCGTGGGCGCTCTCGGGGGTCCGGACAGAACACCACACCTGgaaaacat
>TU20632
cacgcacacacacacacacacaaaacatctttGGCAGGAAGCAGCTTCTTCTGCTGAACAAATGACGACACACACAGGAGCTGCACGGGATTGGACAGCAGTGGCTTcaggaggagacacacacacactcatgctcaCTCCCTCACACGATCACATGCTcactcgctcacacacacgctCGCACACACACTCGCGCACACACGCCACAGTGATGTCAGAGAGTGCGTTCattcaacaaacacacaaacgacCCAAGGcccattaatattaataacaataacaataataacggTGATAAAGCAGAAATCAGTGACATTGTCCCATagcttcatcttcatcatcggTCCTTCGTGTCTCTGTGAAGTCCACTGAGTCCGTTTAGTTTAGTTtccagacaggaagtcagtctGATCGTCTCCACCGAACAACGTTAATAAACCTGCAACATCCCATAATAACCTCCATATAAACTCCTCTAAGTAAGACACTAACCAGCCGGCTAAGCAAGGAACATTTCTGTCCGGTAACAGTCTGACTAAACGACAGGCAGGTTTCCAACCTGACACCCAGAGCGGTTTCTTAAAAGGAGACCTGTTATAAACAGTTTCCAGCTTCATACGTAGCTTGTGTTTCTTCTTGAACATGTTTAGGGGCAGAGACAGAAGATGTAAACATTAAAAGGCTCTGCCCACAGCTAGGCAGAGATATATGAACTGTTGTTTAAGTCAATCACAGATCATCTAaaaatctgtacatcatttggAAAAAACATGTTGTCGAAGAAAAGATTAATCCTGTATACAGACGACATCCTGTTTAATATCTAAAAAACATGTTGGCGAAAAAAAGATTCATCCTGTATACAGACGACATcctgttttatatttaaaaacatgttggcAAAAAAAAGAGTCATCCTGTATACAGACAACATCCTGTTTTATATCTCACTGCTTttttgagtttaggaaaagaacaacggggttggctttaggaaacgtgacacgcgggacatgatctgcggtctcctgggtgaaagtcctgtgtttgacccgtCCTCCActccgaccaacctccctacgcagattttcaccctttcatactactctctacggcgtcaattcacacgcaattgcaaggtaatgtaagtcaatggaggccaaacagcaTTGAttaacacgctaaaaagcaagtatgtgtcttgataacacggcaataatggcatacgaattggagtgtcatacatacgccatttCATGAGATCCGTCTGAACTATGAGGTTTTGgctcacagggatttctttTAAATACGTTTACGtcattatttgaagctttggTGTTTTAATGTTTGACACAAACATCCGAGATTGTAACATTACAGAAACACTAATATAAGAAAtatctgtgtaataacagttgTATGACTGTATATTTAACtagaaaaaactttaaaaaaaaggtgacaaatgtaaaaaaaaaaaagcttcaaaaagtgagcgagaaaaaaaaaagtgacaaaaacattgcctAAAATTCACAGGGATTTGAAGCTGTGGCGTTTTAATGTTTAACATCTGAGATTGTAACATAgatatgaaagaaaaaacagaaacttgTAACAGGTCTCCTTTAACAGACTGAGCGAATAGGCCCAACCCCGTCCCCCCCCTGCGATTGGCCGGTGTGTCTACCAGACCTCGCAGCGCTGCCCTGTGTTCATTGGCGTCCCCTCGGGACAGTTGAAGTGGCGGCTGAAGTCTGGAGAGTTGGCGAGTGTGCCGATGACTCGGTACCGCGGCGGGCTGTGGGGGTCGGTCATCAGACCCTCGTGGGCGCTCTCGGGGGTCCGGACAGAACACCACACCTGgaaaacat

Function

NR:

description
PREDICTED: elongation factor 1-delta-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20627 True 2186 lncRNA 0.51 2 7569982 7637023
TU20632 False 1874 lncRNA 0.40 3 7569982 7592732

Neighbor

gene id symbol gene type direction distance location
trnag-ucc NA coding downstream 59911 7510000 ~ 7510071 (-)
polr2d polr2d coding downstream 60837 7495033 ~ 7509145 (-)
LOC120543849 NA coding downstream 157475 7398193 ~ 7412507 (-)
LOC120544032 NA coding downstream 302268 7262974 ~ 7267714 (-)
wdr62 NA coding downstream 510286 7036122 ~ 7059696 (-)
LOC120551046 LOC106510929 coding upstream 75629 7712652 ~ 7715037 (-)
LOC120551059 NA coding upstream 346071 7983094 ~ 7986427 (-)
LOC120543635 NA coding upstream 385605 8022628 ~ 8063341 (-)
LOC120543856 NA coding upstream 442201 8079224 ~ 8098464 (-)
LOC120543874 LOC101482597,LOC103360230,LOC107102854 coding upstream 732746 8369769 ~ 8392277 (-)
G15300 NA non-coding downstream 71176 7498025 ~ 7498806 (-)
G15235 NA non-coding downstream 77966 7491386 ~ 7492016 (-)
G15226 NA non-coding downstream 108192 7446158 ~ 7461790 (-)
G15227 NA non-coding downstream 110443 7446701 ~ 7459539 (-)
G15212 lrch3 non-coding downstream 213474 7354804 ~ 7356508 (-)
G15325 eif4h,LOC102797691,LOC106535584 non-coding upstream 5598 7642621 ~ 7658962 (-)
G15330 NA non-coding upstream 30174 7667197 ~ 7745661 (-)
G15332 NA non-coding upstream 45703 7682726 ~ 7708677 (-)
G15339 NA non-coding upstream 137418 7774441 ~ 7897904 (-)
G15346 NA non-coding upstream 180419 7817442 ~ 7873063 (-)
lrch3 lrch3 other downstream 226089 7309914 ~ 7343893 (-)
LOC120544114 NA other downstream 358616 7207735 ~ 7211366 (-)
LOC120543599 LOC102193948,LOC103360213,LOC102310147,LOC107834023,LOC106944350,LOC103473932 other downstream 370443 7142729 ~ 7199539 (-)
rpl35a rpl35a other downstream 433820 7129626 ~ 7136162 (-)
LOC120543742 abcc5 other downstream 443584 7114719 ~ 7126398 (-)
trnaa-cgc NA other upstream 299233 7936256 ~ 7936327 (-)
LOC120551075 LOC103475274,LOC105922519 other upstream 500278 8137301 ~ 8155303 (-)
G15757 NA other upstream 831334 8468357 ~ 8469760 (-)
G15771 NA other upstream 964894 8601917 ~ 8656963 (-)
LOC120544569 dgkd,LOC102780004 other upstream 1055051 8692074 ~ 8742123 (-)

Expression


Co-expression Network