G15325 (eif4h,LOC102797691,LOC106535584)


Basic Information

Item Value
gene id G15325
gene name eif4h,LOC102797691,LOC106535584
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 7642621 ~ 7658962 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU20644
tttttcaaatttttttttaaaaaaagttactttttttctttctctctctttcttgcgCCAAATCTAATATTTTATGGCCGTGACTGATCTGGTAGCTGGTTGCCTTGGTTACAGGATTCCCGTCCGTTGAGAAGCGTGGCGGCAAGTTTAGAAAAAGTTGAGTTAGAGTCAGaagaaatggaaagaaagaTGTTTCAGGTGAAGTTTTCAGGGCAGATCaatggaccaatcagagactcCCGTTGAGTTAAATCTGATTGGACTGGACATGTTTGACTCTCATCGGCCCCGAGAGCCAATCGGAGGAGCCTTAACTGTAGGCCACGCCCccaaggagaaaaaaagggtcaaaaactgaaaacagcaAGAAATATGATCAAAGCTACAAAAAAACTCTACAGGTTTAAAGtctgtgtctgcatgtctgtctctgtctgtctgtgtctgcctgcctgtctctctgtctgtaaaTAAATGGCGGGCGACCTTTGACCCAGGAAGGGGGCGGGGCTACAGGACATAATAGCTATGACATCACAGAAAgcagagggggggaggggggtcatGCATCCCGAGCTGCTCgttgtgtttacagtttatGATTCATCTGAGTCAGAGTGGAAAGATTATTCTTTATTCTCTCTAAGAATAAATATTCTGCTCAGACTGAagatggagaagaagaagaagataaagtagtagtagaagaagaGGAGGGTGGCGACCTCTCGGCGTTTTAAAGAACCACGATGCAACATTATCACCGATACATATCGTAACATAATCCTCCGTTAGATACAGCTTCACCTGACCACTTCATATTTACTGGCTGGTTTTACATTTAACTATCTGACACATCTACTCTGGGGGGTTCTGGACCTTTTGGACCGTGTGCAGAGGTCCTTCTTTAACCGACCCCTCCTACAGATTTAACCCGATCCACTTGGAACTTGGCGAGCCCGATCTAAACACCTCGGCGAAGCTACGTCGGGAATCTTGTGCGCTTTCGTCCAACGGTGTTGCCGTGGCGACAAGGGTTGGGCAtctttttgattttaaatattCTTCCTTTGGATTCCGGTTCTTTGAGatgttgaaacaaataagaggaaagtttgattttgatttaaTGGTGGTTTGTagtttttctgccttttttacGTTAAAGAAAGCCccactagagcgccgcttactgggctccatggctgcaacacaacaggcGCCTGGTCGCTATGGAAACCTAAACTTGTGCATGTTAAATTGGGAAgagatgatcggatttgaaacctaaccctccaaacgattccactggaatcgtaattttttaaGCGATTCGAAGtagttctcgatgcccaaccctagcgGCAAGGCGGCATATTCTCACGCCACgaaaacaggaagtggctgCACTGAAGTGCGCACCGCTGATTGTCGCAGTAGGAGTTAGATATTTAAGTGGCTTGTGGGAGCCGGAGAGTGGCATGTCCTTCACCGTAAGACATCAAATATAACGTATAACGTTAGAGTTTTAAAATATAACGTAAAATAACgtacaatataatataaatataacatgATACCGCAAGGCGACGTCACACGCGGTGTGAGAGGAAATGGTTAGGATTAATAAAACAAGAATGGGGTTGCTCCCCCCCTACCCATTTCTCTACGCAGATTTTCACcgtttcatactactcgctacggcatcAAATCACACGCAATCGGCGTACAGAAGTACCGCAAGTACACGCCTCATGGACGCGCCACACGCCACTTAAAAACCTAACTCCCTCTCGATTACTGACCAGGACTTGCATCTTTAATATGCATGTCTGGAAGAACTCAAGTTATAAAACTGTCAAATCATATTTCAGTTGCTTTCTTTAAATGGATATGAATGTATCGGTCTAATATTGTATCGCGTGTTCGCTGCCAGTCAGGAAGGAAAGCTAACCGCGGCGTTTCAAGATCATCCCGTTGGcgtttctctctttcctttcccgTGTTAAAGTTCTctccccatcccccccccccatcagtCTCTTAAGGCTGGTCTTTGGGGATCACCTCCTCTCGCGGCTTGGCTCCGCCGAAGATGGCCGAGTTTGGGTTGGCGACCTGGTTGAGAGGCTCAGAGACGGTCCGAGGCTTCAGCTGCAGCCGAGGCCTCTGAGCACGCTCCTCTTCAGACGGTTCCCTGAAGTCTGTGGCTCCTCCTCCGCGGGGGGGTCCTCCTTCTCTGAAGCGAGCCGATCCTCCGGGCCCTCCTGCTCCCGGTCCTCCCGGTCCTCCGGCGCCGGGGCCCCCCCGCCTGTCACCGGGGCGACCGCCGCCTCGACTCCGCCCTCCCATGAAGTCATCGTCTCTGAAACCTCGAGCGTCATCTTTCCTGAAGCCGAAGCCACCGCCGGGGCCTCCTCGCTCCTGCTTGCGTCCCTCTGCGATGTCAACCCTCAGGGACCTCTGGGAACAGCTGAACAGAGCGCCGTCGTATGTCAGAGCTTCTTTTAGAGATTCCAAATCTTCAAACTCGACGTAACAAAATCCTTTGAACTTGTCCGTCTCTTTGTCTCGGACCAATCGCACGCTGCGGATGTTGAGCTCTTTGAAGATGATGTCGATGTCTCCCTGCACCGAGTTGAACGGCAGGTTTCCCACGTACGCCGTGAACGGAGGCTCTGTCGGCAGCTCCTTCTGCTTCCTGGGGCCGCCTGATCCACCGCCACCACGggacctgagagagagacagacaggcagagagcatcatggg
>TU20645
ATgaaatatgactttttccgcaaatattaagactttttaactgactttttttatgcaaatattaagactttttactgacttttttatgcaaataTTAAGACTTtctactgactttttttctgccaatattaagactttttactgactttttttcacaattatTTACTGAAGTATTTTTCGACTTCCTTCATTTCTATAAACTGTGCCAAACAACAGATTTGTCCTCTTATCAAACTGGCCTTTGTCTTTAAGAACAATCTAACGTTTGCAGTCTTTCCATCCCTAGTTTCCAGAGCAGCGTTCGATTTGATCAGTGAGAGCCGTGCAGACTTGGAGGAGAAACCAAACAGAAGATCAGTTAAACAACAACATCACATGTCTGCAGCAGGCGAGTCATTACTTCCTGGCGCTGATTCGGCGTCCGTACCTCGAGCGTCATCTTTCCTGAAGCCGAAGCCACCGCCGGGGCCTCCTCGCTCCTGCTTGCGTCCCTCTGCGATGTCAACCCTCAGGGACCTCTGGGAACAGCTGAACAGAGCGCCGTCGTATGTCAGAGCTTCTTTTAGAGATTCCAAATCTTCAAACTCGACGTAACAAAATCCTTTGAACTTGTCCGTCTCTTTGTCTCGGACCAATCGCACGCTGCGGATGTTGAGCTCTTTGAAGATGATGTCGATGTCTCCCTGCACCGAGTTGAACGGCAGGTTTCCCACGTACGCCGTGAACGGAGGCTCTGTCGGCAGCTCCTTCTGCTTCCTGGGGCCGCCTGATCCACCGCCACCGAAGCTCCCGTAGGCCCGGTCCCGCTCATCGTAGTTGTCGAAGTCCGCCA

Function

symbol description
eif4h Predicted to enable RNA strand annealing activity; RNA strand-exchange activity; and ribosomal small subunit binding activity. Predicted to be involved in eukaryotic translation initiation factor 4F complex assembly and formation of translation preinitiation complex. Predicted to be located in perinuclear region of cytoplasm. Human ortholog(s) of this gene implicated in Williams-Beuren syndrome. Orthologous to human EIF4H (eukaryotic translation initiation factor 4H).

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20644 True 2770 lncRNA 0.49 5 7645218 7658962
TU20645 False 832 lncRNA 0.40 4 7642621 7651108

Neighbor

gene id symbol gene type direction distance location
trnag-ucc NA coding downstream 132550 7510000 ~ 7510071 (-)
polr2d polr2d coding downstream 133476 7495033 ~ 7509145 (-)
LOC120543849 NA coding downstream 230114 7398193 ~ 7412507 (-)
LOC120544032 NA coding downstream 374907 7262974 ~ 7267714 (-)
LOC120554469 NA coding downstream 600248 7042082 ~ 7042373 (-)
LOC120551046 LOC106510929 coding upstream 53690 7712652 ~ 7715037 (-)
LOC120551059 NA coding upstream 324132 7983094 ~ 7986427 (-)
LOC120543635 NA coding upstream 363666 8022628 ~ 8063341 (-)
LOC120543856 NA coding upstream 420262 8079224 ~ 8098464 (-)
LOC120543874 LOC101482597,LOC103360230,LOC107102854 coding upstream 710807 8369769 ~ 8392277 (-)
G15316 NA non-coding downstream 5598 7569982 ~ 7637023 (-)
G15301 NA non-coding downstream 70442 7505947 ~ 7572179 (-)
G15300 NA non-coding downstream 143815 7498025 ~ 7498806 (-)
G15235 NA non-coding downstream 150605 7491386 ~ 7492016 (-)
G15226 NA non-coding downstream 180831 7446158 ~ 7461790 (-)
G15330 NA non-coding upstream 8235 7667197 ~ 7745661 (-)
G15332 NA non-coding upstream 23764 7682726 ~ 7708677 (-)
G15339 NA non-coding upstream 115479 7774441 ~ 7897904 (-)
G15346 NA non-coding upstream 158480 7817442 ~ 7873063 (-)
G15350 NA non-coding upstream 190032 7848994 ~ 7857158 (-)
lrch3 lrch3 other downstream 298728 7309914 ~ 7343893 (-)
LOC120544114 NA other downstream 431255 7207735 ~ 7211366 (-)
LOC120543599 LOC102193948,LOC103360213,LOC102310147,LOC107834023,LOC106944350,LOC103473932 other downstream 443082 7142729 ~ 7199539 (-)
rpl35a rpl35a other downstream 506459 7129626 ~ 7136162 (-)
LOC120543742 abcc5 other downstream 516223 7114719 ~ 7126398 (-)
trnaa-cgc NA other upstream 277294 7936256 ~ 7936327 (-)
LOC120551075 LOC103475274,LOC105922519 other upstream 478339 8137301 ~ 8155303 (-)
G15757 NA other upstream 809395 8468357 ~ 8469760 (-)
G15771 NA other upstream 942955 8601917 ~ 8656963 (-)
LOC120544569 dgkd,LOC102780004 other upstream 1033112 8692074 ~ 8742123 (-)

Expression


Co-expression Network