G15332



Basic Information


Item Value
gene id G15332
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 7682726 ~ 7708677 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU20653
atccagaactgtagcagtgatccagaagAAGATTGGGATGTGACACATGATGTAGAGGCTTCGTGATgacttgatgtgggagatgattctgctggtCTGCTCCTCATTTGTGAATCTTTTCTTGAAGTACTCTTCCTTCTGTGGttcagtgaaccctctgacctctgtcaccatgtcaacacagAAGGGATCTGAtcggctgctgcaggtcgtgtggttatccagaggcgagcagagggaagcagtttccccctgatgaggtttgtcagcagcacatccactgaggtggactctgtcacatcagtcaggatctcagtgttgaggaagtctagaggaagtcgacactcatccagaccatcaaagatgaacacaaccaggaactcttcaaacctgtagattcctgcttctttggtttcactaaagaacaaatgaacaagttgcaccaagctgtactttttctctttcaacacattcagctctctgaaggtgaatgtaaatgtgaactggatgtcctggttggctttgccttcagcccagtccagagtgaacttttgtgttaagactgttttcccgatgccagccactccgtttgtcatcactgttctgattggttcatctcttccaggtggagttttaaagatgtcttcacatatgattgttgtttctggtctgtctggtttcctggatgctgtttcaatctgtctgacctcatgttcaaCATTGACCTCTTCAGTCTCTCCCTttgtgatgtagatctctgcgaacatctgattcagaaaggttttgtttccagctttagcaatcccctcaaacacacactggaacttcttTCGTGAGTTGGATTTGACTTGTTGCTGGCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU20653 True 860 lncRNA 0.45 2 7682726 7708677

Neighbor


gene id symbol gene type direction distance location
trnag-ucc NA coding downstream 172655 7510000 ~ 7510071 (-)
polr2d polr2d coding downstream 173581 7495033 ~ 7509145 (-)
LOC120543849 NA coding downstream 270219 7398193 ~ 7412507 (-)
LOC120544032 NA coding downstream 415012 7262974 ~ 7267714 (-)
LOC120554469 NA coding downstream 640353 7042082 ~ 7042373 (-)
LOC120551046 LOC106510929 coding upstream 3975 7712652 ~ 7715037 (-)
LOC120551059 NA coding upstream 274417 7983094 ~ 7986427 (-)
LOC120543635 NA coding upstream 313951 8022628 ~ 8063341 (-)
LOC120543856 NA coding upstream 370547 8079224 ~ 8098464 (-)
LOC120543874 LOC101482597,LOC103360230,LOC107102854 coding upstream 661092 8369769 ~ 8392277 (-)
G15325 eif4h,LOC102797691,LOC106535584 non-coding downstream 23764 7642621 ~ 7658962 (-)
G15316 NA non-coding downstream 45703 7569982 ~ 7637023 (-)
G15301 NA non-coding downstream 110547 7505947 ~ 7572179 (-)
G15300 NA non-coding downstream 183920 7498025 ~ 7498806 (-)
G15235 NA non-coding downstream 190710 7491386 ~ 7492016 (-)
G15339 NA non-coding upstream 65764 7774441 ~ 7897904 (-)
G15346 NA non-coding upstream 108765 7817442 ~ 7873063 (-)
G15350 NA non-coding upstream 140317 7848994 ~ 7857158 (-)
G15353 NA non-coding upstream 163375 7872052 ~ 7900120 (-)
G15356 NA non-coding upstream 177883 7886560 ~ 7886932 (-)
lrch3 lrch3 other downstream 338833 7309914 ~ 7343893 (-)
LOC120544114 NA other downstream 471360 7207735 ~ 7211366 (-)
LOC120543599 LOC102193948,LOC103360213,LOC102310147,LOC107834023,LOC106944350,LOC103473932 other downstream 483187 7142729 ~ 7199539 (-)
rpl35a rpl35a other downstream 546564 7129626 ~ 7136162 (-)
LOC120543742 abcc5 other downstream 556328 7114719 ~ 7126398 (-)
trnaa-cgc NA other upstream 227579 7936256 ~ 7936327 (-)
LOC120551075 LOC103475274,LOC105922519 other upstream 428624 8137301 ~ 8155303 (-)
G15757 NA other upstream 759680 8468357 ~ 8469760 (-)
G15771 NA other upstream 893240 8601917 ~ 8656963 (-)
LOC120544569 dgkd,LOC102780004 other upstream 983397 8692074 ~ 8742123 (-)

Expression



Co-expression Network