G15346


Basic Information

Item Value
gene id G15346
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 7817442 ~ 7873063 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU20696
acacacacacacacagacacacacacacacacagacacacacacacagacacacacacacagagacacacacacagagacacacacacagagatacagacacacacagacacagacacacacagacacagagacacacagacacacagagacacacacacacacagagacacacacacacacagagacacacacacagagacacacacacacagagacacacacacacagagagacacacacacacacacagagacacacacacacagagacagagacacacacacagagacacacacacagagacagagacacacacacacacacacacacacacacacacacacacagagagacacacacacagagacacacaca
>TU20697
cacacacaaagagacacacacacagagacacacacacacacacacacacagacagagacacagagacacacacacacacacagacacacacacacacacagacacacacacacagacacacacacacagagacacacacacacacagagacacacacacacagagacacacacacacagagagacacacacacacacacagagacacacacacacagagacagagacacacacacagagacacacacacagagacagagacacacacacacacacacacacacacacacacacacacagagacacatatacacacacac
>TU20698
AGACAGCGAGACAgacacacacacacacacacacacagacagagacacagagacacacacacacacacagacacacacacacacacagacacacacacacagacacacacacacagagacacacacacagagacacacacacacagagacacacacacacacagagacacacacacacacagagacacacacacagagacacacacacacagagacacacacacacagacacacacacacacacacagacacacagagac
>TU20699
cacacacaaagagacacacacacagagacacacacacacacacacacacagacagagacacagagacacacacacacacacacacacacacacacacacagacacacacacacagacacacacacacagagacacacacacagagacacacacacacagacacacacacacacagagacacacacagagacagagacacacacacacagagacacacacacacagagacacacacacagagagacacacacacagagacacacaca
>TU20700
acacacacacacacagacacacacacacacacagacacacacacacagacacacacacacagagacacacacacagagacacacacacagacagacacacacacacacacacagacagacttacacacagagagacacacacacacactcccttcacagacacacacacacacacacacacacacacacacacacacacacacacagagacagacacacacacacacacaactgacacacac
>TU20701
AGACAGCGAGACAgacacacacacacacacacacacagacagagacacagagacacacacacacacacagacacacacacacacacagacacacacacacagacacacacacacagagacacacacagagacacacacacacacagagacacagacacacacacacacagagacacacacagagacagagacacacacacacagagacacacacacacagagacagagacacacacacagagacacacacacagagacagagacacacacacacacacacacacacacacacacacacacagagagacacacacacagagacacacaca
>TU20702
cacacacaaagagacacacacacagagacacacacacacacacacacacagacagagacacagagacacacacacacacacagacacacacacacacacagacacacacacacagacacacacacacagagacacacacacagagacacacacacacagagacacacacacacacagagacacagacacacacacacacagagacacacacagagacagagacacacacacacagagacacacacacacagagacagagacacacacacagagacacacacacagagacagagacacacacacacacacacacacacacacacacacacacagagagacacacacacagagacacacaca
>TU20703
cacacacaaagagacacacacacagagacacacacacacacacacacacagacagagacacagagacacacacacacacacagacacacacacacacacagacacacacacacagacacacacacacagagacacacacacagagacacacacacacagagacacacacacacacagagacacacacacagagacacacacacacagagacacacacacacagagagacacacacacacacacagagacacacacacacagagacagagacacacacacagagacacacacacagagacagagacacacacacacacacacacacacacacacacacacacagagacacatatacacacacac
>TU20704
acacacacacacacagacacacacacacacacagacacacacacacagacacacacacacagagacacacacacagagacacacacacagacacacacacacagagacacacacacagagacacacacacacagagacacacacacacagagagacacacacacagagaacacacacacagagacacacacagagacacacacacacacagagacacagacacacacacacacagagacacacacagagacagagacacacacacacagagacacacacacacagagacagagacacacacacagagacacacacacagagacagagacacacacacacacacacacacacacacacacacacacagagagacacacacacagagacacacaca
>TU20705
acacacacacacacagacacacacacacacacagacacacacacacagacacacacacacagagacacacacacagagacacacacacacacacacacacacacacagagacacacacacacacagacacacacacacacacacacacacaacagacacacacacacaagagacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacagagac
>TU20706
cacacacaaagagacacacacacagagacacacacacacacacacacacagacagagacacagacagagacacacacacacacacacacagacacacacacacacagacacacagagacacacacacacacagagacacacacacagagacacacacacacagagacacacacacacagagagacagacacacacacacacacacacagagacagacacacacgcacagacacacacacacacacacacagagacagacacacacacacacacacacacacgcgcacagagagaaacacacacacacagacagagacagacacacatacaaaaacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20696 False 377 lncRNA 0.47 2 7859745 7860218
TU20697 False 319 lncRNA 0.46 5 7817442 7860482
TU20698 False 260 lncRNA 0.53 5 7843236 7873063
TU20699 False 266 lncRNA 0.38 4 7859745 7860482
TU20700 False 242 lncRNA 0.40 3 7842071 7860218
TU20701 False 329 lncRNA 0.50 4 7859745 7873063
TU20702 False 360 lncRNA 0.50 3 7859745 7860482
TU20703 False 363 lncRNA 0.49 5 7817442 7860482
TU20704 True 394 lncRNA 0.50 2 7859745 7860218
TU20705 False 282 lncRNA 0.38 2 7843236 7860218
TU20706 False 337 lncRNA 0.38 4 7833245 7860482

Neighbor

gene id symbol gene type direction distance location
LOC120551046 LOC106510929 coding downstream 102405 7712652 ~ 7715037 (-)
trnag-ucc NA coding downstream 307371 7510000 ~ 7510071 (-)
polr2d polr2d coding downstream 308297 7495033 ~ 7509145 (-)
LOC120543849 NA coding downstream 404935 7398193 ~ 7412507 (-)
LOC120544032 NA coding downstream 549728 7262974 ~ 7267714 (-)
LOC120551059 NA coding upstream 110031 7983094 ~ 7986427 (-)
LOC120543635 NA coding upstream 149565 8022628 ~ 8063341 (-)
LOC120543856 NA coding upstream 206161 8079224 ~ 8098464 (-)
LOC120543874 LOC101482597,LOC103360230,LOC107102854 coding upstream 496706 8369769 ~ 8392277 (-)
LOC120543728 NA coding upstream 749419 8622482 ~ 8638087 (-)
G15330 NA non-coding downstream 71781 7667197 ~ 7745661 (-)
G15332 NA non-coding downstream 108765 7682726 ~ 7708677 (-)
G15325 eif4h,LOC102797691,LOC106535584 non-coding downstream 158480 7642621 ~ 7658962 (-)
G15316 NA non-coding downstream 180419 7569982 ~ 7637023 (-)
G15301 NA non-coding downstream 245263 7505947 ~ 7572179 (-)
G15356 NA non-coding upstream 13497 7886560 ~ 7886932 (-)
LOC120544065 NA non-coding upstream 198529 8071592 ~ 8072887 (-)
G15403 NA non-coding upstream 246452 8119515 ~ 8125709 (-)
G15428 NA non-coding upstream 381810 8254873 ~ 8255584 (-)
G15430 NA non-coding upstream 387088 8260151 ~ 8260686 (-)
lrch3 lrch3 other downstream 473549 7309914 ~ 7343893 (-)
LOC120544114 NA other downstream 606076 7207735 ~ 7211366 (-)
LOC120543599 LOC102193948,LOC103360213,LOC102310147,LOC107834023,LOC106944350,LOC103473932 other downstream 617903 7142729 ~ 7199539 (-)
rpl35a rpl35a other downstream 681280 7129626 ~ 7136162 (-)
LOC120543742 abcc5 other downstream 691044 7114719 ~ 7126398 (-)
trnaa-cgc NA other upstream 63193 7936256 ~ 7936327 (-)
LOC120551075 LOC103475274,LOC105922519 other upstream 264238 8137301 ~ 8155303 (-)
G15757 NA other upstream 595294 8468357 ~ 8469760 (-)
G15771 NA other upstream 728854 8601917 ~ 8656963 (-)
LOC120544569 dgkd,LOC102780004 other upstream 819011 8692074 ~ 8742123 (-)

Expression


Co-expression Network