G15378


Basic Information

Item Value
gene id G15378
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8029141 ~ 8129061 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU20748
ctcTTCTGCACCTGTTTGGCGtccttctgtgtgtctgtgtgtatgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtctctgtctttgtgtgtgtgtgtgtttgtgtgtgtgcgcgagtgtgtctctgtatctatgtgtgtgtgtgtctctgtctctgactgtgtgtttgcatgagtgtctgtgtgtgtgtgtttgtatgtctgtttgtgtctgggtgtatgtgtgtttgtctgtgtgtatgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaccagcTGTGACTAACGCAGCGCTATGATTGGAGGACTCTTCATCTACAACCACAAGGGGGAGGTGCTGATCTCGCGGGTCTACCGCGATGACATCGGgaacaatgcgg
>TU20749
AGGGTCTCCATGCTGTATTCTAGCTGTGTAGAGGATTGTAGGGGACCAACCAGGTTTTTGGGGCtctttggttgaaagaaacccagatTTCTGATAGAGAAAGTAAAAtgttgaggaggagaagaggttTAAATGGAGCTgattctgtattgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgttggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaccagcTGTGACTAACGCAGCGCTATGATTGGAGGACTCTTCATCTACAACCACAAGGGGGAGGTGCTGATCTCGCGGGTCTACCGCGATGACATCGGgaacaatgcgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20748 True 450 lncRNA 0.54 3 8029141 8129061
TU20749 False 407 lncRNA 0.49 2 8075359 8129061

Neighbor

gene id symbol gene type direction distance location
LOC120543651 NA coding upstream 338069 7679029 ~ 7691072 (+)
eif4h eif4h,LOC102797691 coding upstream 363991 7642554 ~ 7665150 (+)
LOC120551040 NA coding upstream 389130 7612248 ~ 7640011 (+)
ano7 ano7,LOC103361833,LOC108228741 coding upstream 425415 7573724 ~ 7603726 (+)
ece2b LOC103361209,LOC101485402 coding upstream 458423 7535099 ~ 7570718 (+)
LOC120551081 NA coding downstream 115570 8244631 ~ 8307210 (+)
nyap2a LOC103360223 coding downstream 270339 8399400 ~ 8422336 (+)
LOC120543718 NA coding downstream 300164 8429225 ~ 8469760 (+)
rnf168 NA coding downstream 418557 8547618 ~ 8566587 (+)
mindy4b NA coding downstream 1130016 9259077 ~ 9275432 (+)
G15372 NA non-coding upstream 29634 7984935 ~ 7999507 (+)
G15275 NA non-coding upstream 129126 7872416 ~ 7900015 (+)
G15276 NA non-coding upstream 143446 7885062 ~ 7885695 (+)
G15269 NA non-coding upstream 158854 7798837 ~ 7870287 (+)
G15408 NA non-coding downstream 8441 8137502 ~ 8154585 (+)
G15417 NA non-coding downstream 43603 8172664 ~ 8173812 (+)
G15421 NA non-coding downstream 84132 8213193 ~ 8213969 (+)
G15445 NA non-coding downstream 205124 8334185 ~ 8334478 (+)
G15447 NA non-coding downstream 224667 8353728 ~ 8354098 (+)
LOC120543711 LOC102298536 other upstream 136668 7858053 ~ 7892473 (+)
rffl rffl other upstream 175712 7806809 ~ 7853429 (+)
LOC120543808 NA other upstream 201054 7826610 ~ 7828087 (+)
G15234 NA other upstream 537084 7491365 ~ 7492057 (+)
G15173 LOC102077075 other upstream 630000 7398101 ~ 7399141 (+)
G15415 NA other downstream 41635 8170696 ~ 8172491 (+)
LOC120543817 LOC104967478 other downstream 422530 8551591 ~ 8621654 (+)
LOC120544007 LOC106595375,LOC106565963,LOC106611916,LOC106588692,LOC106572435,LOC106612550,LOC106583987,LOC103477372 other downstream 667009 8796070 ~ 8808975 (+)
G15525 NA other downstream 720440 8849501 ~ 8850871 (+)
LOC120543609 LOC108250351,LOC108250349 other downstream 777669 8906730 ~ 9098564 (+)

Expression


Co-expression Network