G15507


Basic Information

Item Value
gene id G15507
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8690012 ~ 8700884 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU20951
TGAGAATGTTTTATTTGCCAAAAGGCTGAAATGACTCAGCGGTTTCTCTTGTGTGTGATTAAGGCTTCAGACAGCAATCGCTGATAtgtttaagacattttaataaatgaacAGTTAGTTTGGTCCTTTAAAGACAGCGCCACTCAGGAGCGTCTCTGATTGGTTCAGGAGCGTCTATGTCTCCGCCCCATCGTTACTTTTTACCACTTCCTCCAAATATCAGCTGCAGTTCATACAGGAAATAAATATCTTTTAGTACAAAAGTTAATGTTTCTAGAAAGAGTTAAAGGTTCTGCTGCGTCCAGAGGAGCTTGTGATTGGTCGGCCGGTCAgcggggtcaaaggtcacacgGAGCCGACTGGATCCTTCTGTCCTCTCATGTAGAACCCGGGCCGGCTGGGTTTCAATCCTTGAGGTTgtccaaagacaaaaacatcctACCGTAAAAAAGTCTAAAGTTCAAAAGGGACAAGCATTacaaaaagcgccaaaaaaaatgccaaagaaGCACCCAAAACACGGGCAAAAAAGGGTTAAAGAAGCACCCAAAAAAGGATTGAAAAAACGCTGAAAAAGGGTTAAAGAACGGTTAAAAaaaactaggggtggtacggttcatgaaaaaacacccgaaccgctcggttcgctagtctcggttcggagcgtgtgtgtaccgcacggttcgtcagtacactgttaatggtcactaacctcttactgccgtagtgcccactttatacacctatgttaaaacacttactggaaatgacgagcgggatgggcgtgacaaacgcaacccatggcagctgattggacgattgcgtcacatgggtctggctggtcccaaatttcaaagccagactgtcatggcggctcgttcagaatacgatctcatattgtactaaaatagttcaccgaaacgtgtttctgaaaacattttaagcgagaaataggccatgcagttgctgaatctgtcttcatttcagatcgacaaaggtcagtttaacagattttcatcagattttgagagacaccgtgccgaccgctcctcaagtggagtggcgCACTGCtggtcacgtcacctgcagagatgggagagaggctgcccagagctggaggatgcgccagcgtcgtttatagtctggtgtgtgggaacattttggatttcacgttacctatgatgaaataaaacaatatagaactgccactgtgtgcacgttttgtgcaacatgcattcaatatgcaaattttagctatatgctgaagtatattctggagtgataaagaaaaaaataataaccgtactgaaccgaaaaccgtgaccctaaaaccgtgatacgaaccgaaccgtgggttttgtgaaccgtaccacccctaaaaaaaaaacttaaaaaactgtcaaaaagcGCCAGAAAAAGCGTCCAAAGTGTTAAAAGGGTAATAAAACAGCATCAAAAGCTTCAAAGGAAAAGGAGTTTGTGTGGAGGTTGGTGTGGTCactgaagacagacagaaagacagaaagacagaaagacatgaagacagaaagacagaaagacatgaagacagaaagacatgaagacagaaagacatgaagacagaaagacatgAAGACAGATTCTGCAGATTCTAAAGAAATGAGACCAAAGGGAGAACGTGAACGCGTGTCCTCTCCACACAGAGAGTCTCTGACTCGGCAGACTTGTTCTAAACGTTCTGTTTGGGTCTGAAGGTAAGACAATGTCAATAAAGGTTTAAAAGTCTCTGGTGGCGGTGGATCCATGTTAGGCCCCGCCCTCTCCGCCTCCCGGGTGAGATGACAAGGCACTAGCGGGTCCTGGTATTGGTCCAATCACAGCGAGCGTCAGATGTGATGTCACAGCATGTGGCTGTGTTCAGGGTCAGAGGAAACGTCCGTTATCACATCGCTGCATCTGGGACATCAAAGACAAAGCTTTGACTTCTTAGAATCATTATTATACTCATGATGACATATCTAACGAGTGTCCAAAGCATCAAAAGCatcaaaagcatca
>TU20952
TGAGAATGTTTTATTTGCCAAAAGGCTGAAATGACTCAGCGGTTTCTCTTGTGTGTGATTAAGGCTTCAGACAGCAATCGCTGATAtgtttaagacattttaataaatgaacAGTTAGTTTGGTCCTTTAAAGACAGCGCCACTCAGGAGCGTCTCTGATTGGTTCAGGAGCGTCTATGTCTCCGCCCCATCGTTACTTTTTACCACTTCCTCCAAATATCAGCTGCAGTTCATACAGGAAATAAATATCTTTTAGTACAAAAGTTAATGTTTCTAGAAAGAGTTAAAGGTTCTGCTGCGTCCAGAGGAGCTTGTGATTGGTCGGCCGGTCAgcggggtcaaaggtcacacgGAGCCGACTGGATCCTTCTGTCCTCTCATGTAGAACCCGGGCCGGCTGGGTTTCAATCCTTGAGGTTgtccaaagacaaaaacatcctACCGTAAAAAAGTCTAAAGTTCAAAAGGGACAAGCATTacaaaaagcgccaaaaaaaatgccaaagaaGCACCCAAAACACGGGCAAAAAAGGGTTAAAGAAGCACCCAAAAAAGGATTGAAAAAACGCTGAAAAAGGGTTAAAGAACGGTTAAAAaaaactaggggtggtacggttcatgaaaaaacacccgaaccgctcggttcgctagtctcggttcggagcgtgtgtgtaccgcacggttcgtcagtacactgttaatggtcactaacctcttactgccgtagtgcccactttatacacctatgttaaaacacttactggaaatgacgagcgggatgggcgtgacaaacgcaacccatggcagctgattggacgattgcgtcacatgggtctggctggtcccaaatttcaaagccagactgtcatggcggctcgttcagaatacgatctcatattgtactaaaatagttcaccgaaacgtgtttctgaaaacattttaagcgagaaataggccatgcagttgctgaatctgtcttcatttcagatcgacaaaggtcagtttaacagattttcatcagattttgagagacaccgtgccgaccgctcctcaagtggagtggcgCACTGCtggtcacgtcacctgcagagatgggagagaggctgcccagagctggaggatgcgccagcgtcgtttatagtctggtgtgtgggaacattttggatttcacgttacctatgatgaaataaaacaatatagaactgccactgtgtgcacgttttgtgcaacatgcattcaatatgcaaattttagctatatgctgaagtatattctggagtgataaagaaaaaaataataaccgtactgaaccgaaaaccgtgaccctaaaaccgtgatacgaaccgaaccgtgggttttgtgaaccgtaccacccctaaaaaaaaaacttaaaaaactgtcaaaaagcGCCAGAAAAAGCGTCCAAAGTGTTAAAAGGGTAATAAAACAGCATCAAAAGCTTCAAAGGAAAAGGAGTTTGTGTGGAGGTTGGTGTGGTCactgaagacagacagaaagacagaaagacagaaagacatgaagacagaaagacagaaagacatgaagacagaaagacatgaagacagaaagacatgaagacagaaagacatgAAGACAGATTCTGCAGATTCTAAAGAAATGAGACCAAAGGGAGAACGTGAACGCGTGTCCTCTCCACACAGAGAGTCTCTGACTCGGCAGACTTGTTCTAAACGTTCTGTTTGGGTCTGAAGGTAAGACAATGTCAATAAAGGTTTAAAAGTCTCTGGTGGCGGTGGATCCATGTTAGGCCCCGCCCTCTCCGCCTCCCGGGTGAGATGACAAGGCACTAGCGGGTCCTGGTATTGGTCCAATCACAGCGAGCGTCAGATGTGATGTCACAGCATGTGGCTGTGTTCAGGGTCAGAGGAAACGTCCGTTATCACATCGCTGCATCTGACGGCGTCTTCAGGCCTCGCTGGCGCTGCTGTTCCTGTTGATCTCTCGGATTCCCTGAAGGATCCTCTTAATGTGACCTACTTTAGTTACACCCagatcctacacacacacacacacacacacatagacagacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacagagacacacacacacacacacacacacacaaagagacacacacacacaaacacatacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20951 False 2037 lncRNA 0.36 3 8690012 8692544
TU20952 True 2297 lncRNA 0.46 5 8690012 8700884

Neighbor

gene id symbol gene type direction distance location
rnf168 NA coding upstream 123425 8547618 ~ 8566587 (+)
LOC120543718 NA coding upstream 220252 8429225 ~ 8469760 (+)
nyap2a LOC103360223 coding upstream 267676 8399400 ~ 8422336 (+)
LOC120551081 NA coding upstream 382802 8244631 ~ 8307210 (+)
LOC120543907 NA coding upstream 564343 8123625 ~ 8125669 (+)
mindy4b NA coding downstream 558193 9259077 ~ 9275432 (+)
LOC120551113 NA coding downstream 582580 9283464 ~ 9301261 (+)
LOC120543803 NA coding downstream 608315 9309199 ~ 9315322 (+)
LOC120543792 NA coding downstream 608323 9309207 ~ 9329512 (+)
LOC120543784 NA coding downstream 630683 9331567 ~ 9339168 (+)
G15499 NA non-coding upstream 51589 8587277 ~ 8638423 (+)
G15497 NA non-coding upstream 87742 8579871 ~ 8602270 (+)
G15498 NA non-coding upstream 93613 8586383 ~ 8596399 (+)
LOC120544074 NA non-coding upstream 155271 8531244 ~ 8534741 (+)
G15487 NA non-coding upstream 185858 8503817 ~ 8504154 (+)
G15513 NA non-coding downstream 50734 8751618 ~ 8911859 (+)
G15519 NA non-coding downstream 50857 8751741 ~ 8754422 (+)
G15485 NA non-coding downstream 75754 8776638 ~ 8777948 (+)
G15518 NA non-coding downstream 99486 8800370 ~ 8829278 (+)
G15524 NA non-coding downstream 133036 8833920 ~ 8834390 (+)
LOC120543817 LOC104967478 other upstream 68358 8551591 ~ 8621654 (+)
G15415 NA other upstream 517521 8170696 ~ 8172491 (+)
LOC120543711 LOC102298536 other upstream 797539 7858053 ~ 7892473 (+)
rffl rffl other upstream 836583 7806809 ~ 7853429 (+)
LOC120543808 NA other upstream 861925 7826610 ~ 7828087 (+)
LOC120544007 LOC106595375,LOC106565963,LOC106611916,LOC106588692,LOC106572435,LOC106612550,LOC106583987,LOC103477372 other downstream 95186 8796070 ~ 8808975 (+)
G15525 NA other downstream 148617 8849501 ~ 8850871 (+)
LOC120543609 LOC108250351,LOC108250349 other downstream 205846 8906730 ~ 9098564 (+)
G15540 NA other downstream 225708 8926592 ~ 8930270 (+)
G15552 NA other downstream 293297 8994181 ~ 9091968 (+)

Expression


Co-expression Network