G15514


Basic Information

Item Value
gene id G15514
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8902835 ~ 8916243 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU20970
TGGTTACATTACTGGTTATATTACTGGTTACATTACTGGTTACATTACTGGTTACATTACTGCGTTACATTACTGCGTTACATTACTGGTTACATTACTGGTTACATTACTGGTTACATTACTGCTTTACATTACTGGTTACATTACTGGTTACATTACTGGTTACATTACTGGTTACATTACTGGTTATATTACTGGTTATATTACtggttatattactgcgttacagcagaAAGGAATAAATTACTGTAACGGGTTGGTTACACtggttacctgtgtgtgtgtgtgtgtgacctgtgtgtgtgtgttacctgtgacTCCGCTGCAGCTAGCCTCACACTCCTCCCTGGACTCAAAGTGGTTTTCGTTGGCGTCACAGCCTCCGTAGGTGAAGCCTCgacagctctgattggtcacATCGTAGTAGAACCTGGGGAAGGCTGCACGGCACGAGCCCACCTTCATCGGCAGCCGGCAACGGACTggaagagacaaacacacactgttgtctgtctggttgGTTTCTCCCAGCACCACCAGCGGGACGACGCGCAGTTCCTCCCCGCCCTCCTGGTTCTTTGTCTCGGCGTCTGTCGGAACTTTCTTGCGGTAAATCTTGAACTGCGTGCTGGGTCGATACACGCACATGTCCCGGCCCTGGCGCACGCACTGGACCAGCATGCACTGCGGCAGTCCATCCATGGGGAAGCCGAGCAGCGCCAGGTCGCAGCCCGCGGTCTGACAGCAGGCCTCGCGGCACAGCCGCGGGTCCGATCCCTCCACGGTGTTGTTCTGGCCCTGCAGTAGCACGGAGGCCAGGGACACCGGGTCCAGAGCCTGGTCCGGGTCTACATCCGGGTCCCAGGCGCAGTCCAGAGCCAGAGCCGGCCCGGTAGCGAGCAGGAGGCAGAGTAACAGCAGAGACACGCGCTGCATCATCTTGGACATCAATAGACGAGACAACAGGGAACTAAAGCACTTCCTGCTTCTGATGGCGCAGATATATTCACCTGGGCGGCAGGTGAGGCCACGTCCCTCCCCCGCTGCGTCATGACGTCACACAGACACCTCGAACAGAACGTTACGGCCTGATGATGTCAGCTGTTAGATAATTAATCTTTCTcttatttaacctttatgtctctgtgtgtgtgtgtgtgtgtatgtgtgcgtgtgtctgtgtgtgtgtgtatctctatgtctgtgtgtgtgtgtgtgtgtgtgtgtatctctatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggcagacagacagagaggcagacagacagacagacaggcagacagacaacccagggtttcccaatccagcagCACGTTCACATTAAAGAGGCGGGGTTTGCACAGCTCGACCAATCACAGacatctaccagagctgcatattttacataagaagagcaaattataactctacataaatatgaagaacacagacacggttttacaggaaAACActatacagtcgctgcttcctaaaacaggaggacagctggcaaaaataTAGCTGATGCTGTAAATGCATAAATCACGAgacttattaatatcacttcctcatcagtcaggaccaagatctgaccataattacactggtgatttccataaactgttgttgctttagccttttattaaAGTTACAACCCCAGCAGTGGGAAGCCATCGttagagcaaataaaacatatcaaaacataattctaactgatgcattggcaacacacggctcaagaagccaacAGACAACATgtaatatataactatatataattatattatataactatatataattccctcccattaaaatcgaTATCGttcataaagatacccatcagggaatgttaacggggtgaCTGTCTCTAAATATTTTAActatgagcgcacctctctctctctctctctctctctctctctctgtctctctctctctccctctctctctctctctctctctctgtctctctctctctgtctctctctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20970 True 2029 lncRNA 0.48 6 8902835 8916243

Neighbor

gene id symbol gene type direction distance location
rnf168 NA coding upstream 336248 8547618 ~ 8566587 (+)
LOC120543718 NA coding upstream 433075 8429225 ~ 8469760 (+)
nyap2a LOC103360223 coding upstream 480499 8399400 ~ 8422336 (+)
LOC120551081 NA coding upstream 595625 8244631 ~ 8307210 (+)
LOC120543907 NA coding upstream 777166 8123625 ~ 8125669 (+)
mindy4b NA coding downstream 342834 9259077 ~ 9275432 (+)
LOC120551113 NA coding downstream 367221 9283464 ~ 9301261 (+)
LOC120543803 NA coding downstream 392956 9309199 ~ 9315322 (+)
LOC120543792 NA coding downstream 392964 9309207 ~ 9329512 (+)
LOC120543784 NA coding downstream 415324 9331567 ~ 9339168 (+)
G15517 NA non-coding upstream 3163 8899219 ~ 8899672 (+)
LOC120544096 NA non-coding upstream 7580 8894477 ~ 8895255 (+)
LOC120544125 NA non-coding upstream 8442 8893503 ~ 8894393 (+)
G15530 NA non-coding upstream 25285 8876220 ~ 8877550 (+)
G15524 NA non-coding upstream 68445 8833920 ~ 8834390 (+)
G15516 NA non-coding downstream 8126 8924369 ~ 8926498 (+)
G15543 NA non-coding downstream 34019 8950262 ~ 8952015 (+)
G15567 NA non-coding downstream 202394 9118637 ~ 9119355 (+)
G15571 NA non-coding downstream 256589 9172832 ~ 9175805 (+)
LOC120544104 NA non-coding downstream 313454 9229697 ~ 9233965 (+)
G15525 NA other upstream 51964 8849501 ~ 8850871 (+)
LOC120544007 LOC106595375,LOC106565963,LOC106611916,LOC106588692,LOC106572435,LOC106612550,LOC106583987,LOC103477372 other upstream 93860 8796070 ~ 8808975 (+)
LOC120543817 LOC104967478 other upstream 281181 8551591 ~ 8621654 (+)
G15415 NA other upstream 730344 8170696 ~ 8172491 (+)
LOC120543711 LOC102298536 other upstream 1010362 7858053 ~ 7892473 (+)
G15540 NA other downstream 10349 8926592 ~ 8930270 (+)
G15552 NA other downstream 77938 8994181 ~ 9091968 (+)
G15565 NA other downstream 197599 9113842 ~ 9122292 (+)
G15572 NA other downstream 356656 9272899 ~ 9354628 (+)
G15605 NA other downstream 457911 9374154 ~ 9378204 (+)

Expression


Co-expression Network