G15516


Basic Information

Item Value
gene id G15516
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8924369 ~ 8926498 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU20974
aaaatacccaTAATACTATACTCCAGAAAATGACAAGTTATTATTAATCTCAACACTGTTTCCTCCTAACTCCTGTTAAATCACATAAGACTAGGAATATCTAAAGTaaattattgttcattttgttGGATAGAtctttgttcattttttgaagtGTATTAATCCGTGTTTTGGGGTTCCTAAACATAGCCTACTGTTCTGTAGAATTAAGTTCTCAtctgagcagatttctgtcattcaaataactgagttgtagtttaaaacttttacagccaatttaataaaattaagAGTTTTTATTCGGTCTCGGGTCCATAAatacagttaatggatacaggcacggagaactgaaggctcggttagcaaacattagctctgattagcagTTAGCGCCGGTTAgctagctccgttataaagacaTGAAGCGGAGGAGCCTGCTgctgagaggggtaacaaccagactctgataaatgatgttcagggagctttcacagcagtgtGGCCCTGTTGTTTctacggttttattagtacagttaatcccattGCAAGACCACCAGCAGTATGCTACTactaacgatagcctctctgagcaagtgcaacaTTGACGCGGTCATGCATGTGGCACACAACTTtgcgagggggaggggctggagacAGCTGGTCTGTGTGCGCTGTAAATAATTTACCGTTGTTTGgaatagggctgcaacaacgaatcgataaaattCCATTATTAAAAAAGTTGGCAACAAATTTCATTATCAATTCGTTGTGTCGCTCAactattacgccactcagtcgtggagatgaaaaaaatgttgttgaGCGCAGAGCGGAGTGGAGCAGCATGGAGTGGAGCAGCGCGGAGTGGAGCAGCGCGGAGTGGAACAGCGCAGCGCAgagcgaaagaaaagaaaaaagagcagaGCGGGGGTAGAGGAAATACGGAGAGAGACCAGAGAGACCCGTAACGTTGCTCTGAAACACACGGCGGAGGCAGATAAAGCAGTACATCCTAAGTCATCCAAGGTCTGGGAGCATTTCCCACTAAATAAATTGAAAAcgtgttaattgcaagataagcAAAAGCGACATGGCATGGCACGGGCGCACCACTCTGATGATTCAGCACCTAAAACGTAAACATGAGtccttgatgaggaggaagggagttcaacagcagggtaaagtcacccctaaccctaaccctaccaTTCAAgaattaggctactaatcattggcacaaattaacagttgtagctagggctgcacaatatatcataaatgttgtgttaacttGAAACGGGTaaaccttgtggtgcattcaaagttattgtaaaatacccttttcttaTCTGTTTCGgtcatttaacagcaatttactggtgaaataagttattattgttatgatgttattattattacatttttaataaatcatttaaatcctCCCTTTTTTGCGCTGTATTAATATTCATTAATATTGAGATTAGATTTCTGGGACTCTTCAGTAACCTCTTTCCTTCGctcacctcctccttcctcttgctccctcgctcctctgagtctcccgaggcctcactgacaactttcctcttgccctccttcttcttctcctccttctccttgtgtttctgcatgtactcGGTGATAAGGTCGGGGAAGTCCAGGTTGTCTTGCGGCTCCCATGTGTTATCCTCACTGGAAAGGTGAGTGCAGACACAAGAAAATCTCCTCAGGCTTTGATTTTAGGCAATGCATTCTCACTCTAATTGCTAATTCgtattattccttttttctaTTGTCATTTTGTAAGGTTATTTGATGGTCTGCAACTTAGTGTCAAAATACCAAACCTTCAACTTTGAGGGCATGATACAATGCCGGAATTTATGCTGTAGATTATCTGCAATTTCTAAATatatatatatatatatatattcaggaCCAAGAACACCAAGTATTAATATTATAGACTCATACTTACTCTGAGAACCCCTTCCATTTCAGCAgaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20974 True 2015 lncRNA 0.41 2 8924369 8926498

Neighbor

gene id symbol gene type direction distance location
rnf168 NA coding upstream 357782 8547618 ~ 8566587 (+)
LOC120543718 NA coding upstream 454609 8429225 ~ 8469760 (+)
nyap2a LOC103360223 coding upstream 502033 8399400 ~ 8422336 (+)
LOC120551081 NA coding upstream 617159 8244631 ~ 8307210 (+)
LOC120543907 NA coding upstream 798700 8123625 ~ 8125669 (+)
mindy4b NA coding downstream 332579 9259077 ~ 9275432 (+)
LOC120551113 NA coding downstream 356966 9283464 ~ 9301261 (+)
LOC120543803 NA coding downstream 382701 9309199 ~ 9315322 (+)
LOC120543792 NA coding downstream 382709 9309207 ~ 9329512 (+)
LOC120543784 NA coding downstream 405069 9331567 ~ 9339168 (+)
G15514 NA non-coding upstream 8126 8902835 ~ 8916243 (+)
G15513 NA non-coding upstream 12510 8751618 ~ 8911859 (+)
G15517 NA non-coding upstream 24697 8899219 ~ 8899672 (+)
LOC120544096 NA non-coding upstream 29114 8894477 ~ 8895255 (+)
LOC120544125 NA non-coding upstream 29976 8893503 ~ 8894393 (+)
G15543 NA non-coding downstream 23764 8950262 ~ 8952015 (+)
G15567 NA non-coding downstream 192139 9118637 ~ 9119355 (+)
G15571 NA non-coding downstream 246334 9172832 ~ 9175805 (+)
LOC120544104 NA non-coding downstream 303199 9229697 ~ 9233965 (+)
G15575 NA non-coding downstream 331928 9258426 ~ 9273836 (+)
G15525 NA other upstream 73498 8849501 ~ 8850871 (+)
LOC120544007 LOC106595375,LOC106565963,LOC106611916,LOC106588692,LOC106572435,LOC106612550,LOC106583987,LOC103477372 other upstream 115394 8796070 ~ 8808975 (+)
LOC120543817 LOC104967478 other upstream 302715 8551591 ~ 8621654 (+)
G15415 NA other upstream 751878 8170696 ~ 8172491 (+)
LOC120543711 LOC102298536 other upstream 1031896 7858053 ~ 7892473 (+)
G15540 NA other downstream 94 8926592 ~ 8930270 (+)
G15552 NA other downstream 67683 8994181 ~ 9091968 (+)
G15565 NA other downstream 187344 9113842 ~ 9122292 (+)
G15572 NA other downstream 346401 9272899 ~ 9354628 (+)
G15605 NA other downstream 447656 9374154 ~ 9378204 (+)

Expression


Co-expression Network