G15524


Basic Information

Item Value
gene id G15524
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8833920 ~ 8834390 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU20982
ccccaacctgcctccttatcAATATATTTGGTGCTCTAGGCGgcctgcacactggctgtgtggcgtgagcgtggcgtttgtGTTGCATGTCAGTTGCGTAGCGTTTCTGTTGCATGTCAGTTGCAtggcgtttctgttgtgtgtcagttgcgtggcgtttctgttgcatgtcagttgcgtggcgtttctgttgcgtggcgtgAGTGTGGCGTTTGTGTTGCGTGGCGGGAGCGTGGCGTTtgtgttgcgtgtcagttgcgtagcgtttctgttgcgtgtcagttgggTGGCGTGAGCAtggcgtttctgttgtgtgtcagttgcatggcgtttctgttgtgtgtcagttgcgtggcgtttctgttgcgtggcgtgagcgtgatGTTtgtgttgcgtgtcagttgtgtggcgtttctgttgcgtgtcagttgcgtggcgtttttg
>TU20983
ccccaacctgcctccttatcAATATATTTGGTGCTCTAGGCGgcctgcacactggctgtgtggcgtgagcgtggcgtttgtGTTGCATGTCAGTTGCGTAGCGTTTCTGTTGCATGTCAGTTGCAtggcgtttctgttgtgtgtcagttgcgtggcgtttctgttgcatgtcagttgcgtggcgtttctgttgcgtggcgtgAGTGTGGCGTTTGTGTTGCGTGGCGGGAGCGTGGCGTTtgtgttgcgtgtcagttgcgtagcgtttctgttgcgtgtcagttgggTGGCGTGAgcatggcgtttctgttgtgtgtcagttgcgtggcgtttctgttgcgtggcgtgagcgtgatGTTtgtgttgcgtgtcagttgtgtggcgtttctgttgcgtgtcagttgcgtggcgtttttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20982 True 444 lncRNA 0.46 2 8833920 8834390
TU20983 False 417 lncRNA 0.55 3 8833920 8834390

Neighbor

gene id symbol gene type direction distance location
rnf168 NA coding upstream 267333 8547618 ~ 8566587 (+)
LOC120543718 NA coding upstream 364160 8429225 ~ 8469760 (+)
nyap2a LOC103360223 coding upstream 411584 8399400 ~ 8422336 (+)
LOC120551081 NA coding upstream 526710 8244631 ~ 8307210 (+)
LOC120543907 NA coding upstream 708251 8123625 ~ 8125669 (+)
mindy4b NA coding downstream 424687 9259077 ~ 9275432 (+)
LOC120551113 NA coding downstream 449074 9283464 ~ 9301261 (+)
LOC120543803 NA coding downstream 474809 9309199 ~ 9315322 (+)
LOC120543792 NA coding downstream 474817 9309207 ~ 9329512 (+)
LOC120543784 NA coding downstream 497177 9331567 ~ 9339168 (+)
G15518 NA non-coding upstream 4642 8800370 ~ 8829278 (+)
G15485 NA non-coding upstream 55972 8776638 ~ 8777948 (+)
G15519 NA non-coding upstream 79498 8751741 ~ 8754422 (+)
G15507 NA non-coding upstream 133036 8690012 ~ 8700884 (+)
G15499 NA non-coding upstream 195497 8587277 ~ 8638423 (+)
G15530 NA non-coding downstream 41830 8876220 ~ 8877550 (+)
LOC120544125 NA non-coding downstream 59113 8893503 ~ 8894393 (+)
LOC120544096 NA non-coding downstream 60087 8894477 ~ 8895255 (+)
G15517 NA non-coding downstream 64829 8899219 ~ 8899672 (+)
G15514 NA non-coding downstream 68445 8902835 ~ 8916243 (+)
LOC120544007 LOC106595375,LOC106565963,LOC106611916,LOC106588692,LOC106572435,LOC106612550,LOC106583987,LOC103477372 other upstream 24945 8796070 ~ 8808975 (+)
LOC120543817 LOC104967478 other upstream 212266 8551591 ~ 8621654 (+)
G15415 NA other upstream 661429 8170696 ~ 8172491 (+)
LOC120543711 LOC102298536 other upstream 941447 7858053 ~ 7892473 (+)
rffl rffl other upstream 980491 7806809 ~ 7853429 (+)
G15525 NA other downstream 15111 8849501 ~ 8850871 (+)
LOC120543609 LOC108250351,LOC108250349 other downstream 72340 8906730 ~ 9098564 (+)
G15540 NA other downstream 92202 8926592 ~ 8930270 (+)
G15552 NA other downstream 159791 8994181 ~ 9091968 (+)
G15565 NA other downstream 279452 9113842 ~ 9122292 (+)

Expression


Co-expression Network